CsGy3G010590.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGTAGAGTTGTTTATTAATATTACCAGTATGTATGGACGTCTATCTATAAATTTTTGTTATATATTACTAAAGAAAGAAACAAAATAATAAGAAATTGGATAAAAAAAATTAGAAAAAACAAGAAGTAATTAGTGATAGTAATAAAAGCAAGAACAATAATAATTTGGTGACCGTGGTTGTAGAAGCGCGCATCTGCATGGGGTGCTGGAACAATACAAAAGAAAACCACTCTTCAAAAATCTCTCATTTTCAATTCAATTTCCTCTACTACAATTGATACTCTCTTTGATTCATCTTTCTCTCTGTGGGGTTGCCTTCTGTTTCCCCTTTTCCCCTCTCTCACACCTCAATTTCAACCCCATTTTCACCAATCAATGCTTCTTTTTCTTTCTCATACCCTTTTTCAACCCTTCTTCCCACTTTTTTGTCCATCTTTTCCTCTCAATTCTCTCAATTTCCTCTTCCAAACATGCCATTCTAGGGTTTTAATACACATTACCTGTTCTTTCTTTAAATTCCGTTCAAAAAACAACCCTTTATGGCCGCCGCTACTCCTACGGCGGCTACAAAGTTCATCAAGTGCGTCACGGTTGGAGATGGCGCTGTTGGGAAGACTTGTCTTCTCATTTCTTACACTAGCAACACTTTTCCGACTGTATGGAATGAACTCTTGTTGTTTTGATTGTTTTCTTGGAATTTATAGTTTATGTGTTTAGCTTAATTAAGTTTTTGGGTCGATGGGTATTGTGTTAATCATTTGCTTTGGCAGGATTATGTTCCTACTGTTTTTGACAATTTCAGCGCCAATGTTTTGGTTAATGGGCAGTCTGTGAATTTGGGTCTCTGGGACACTGCTGGTGATTTTCTTTTCCTCTGTTTCTGATAAGCATGCTTAATTTATCCAGTTTTGTTTTTAAACTGTTGGATTTTCTTTTCTGGGATTTCTATATTTTCGTATGTGTAAGCCTAAAGCTGATTGCATCTAATAATTGCCACTTCCTGATAACGTATAAAAACCATAACACCGTGGAAATGGAGTGACGTTTTTTTGGAGATTGAACCAAATTATAAGACAACGGAAGTTTCAAATTGAAGCTAAACGCAAACTGTAATCACTATCGGAATATAACAGTAGTTCAACCAGTGTATTATAATAGAATCTGATTATCGTCGTAGAGAGGCATTTTATGTGTCATCAGGAGCTGTATGATAGGAATATGTGAATAAGTTTTATCAAGTACTTAGAGGAAATTCAGATGCACTTTTAAAATGGAACCATGTTACAAAGTTGTTCTTCTAAAAAAAATTTCCAAGACTGCCCAATTCATAATAAAGAAAGAGTCCTTGTTCCAAAGGCACTTAATCATATAAATGTTCCCTTTAATTTCCAAAGGCACTTAATCATATAAAAGTGGTATATGAATGTTAAAAGGATACCTTTACAGGTCAAGAAGATTATAGCAGGCTAAGACCTTTGAGTTACAGAGGAGCTGATGTTTTCCTTCTTGCCTTTTCTATTATAAGTCGGGCCAGCTTTGAAAATATATCAAAGAAAGTAAGTTTAATTCCTGCACGATATTTGGAATGTTTATTATTTTGATTCAGTATTTAGATTCTTCTTGATGTCACTTTCTTTTGGAGCAGTGGATCCCAGAGTTAAGGCATTATGCCCCATCAGTACCCATTATTCTTGTAGGGACCAAACTAGGTGCCTTTCTTCTTTAACTTTAATTTCATTGCCTGAATTATCAATTCCTTCACTTTCAAGTAAAATTCTCATATTCTTTCCTGATGGTTGTTTTTGTGGGCTAGTATAAGAACGCACATCCACATATGGAAGATGGAACCATCTTTTCTAACTTTTCAGGGACACCAACAGATAAATATGCATGTTTCAATTTCATGTAATCCGAGATAAACGTCTTGATTATTGATCTTCTACCTACAAGTCCACACATTAAACCAGTATCTCCACATAGTTAGATATATTTGAAATATGTAAAATGATCCCTGCTCGTGTCTCTAAAATGTATATTTCTCATATAGGGGAAGATAGTTCTTGCAGCTCCTATTCGCCCCCCACCCACCCCTACCCCACAAACCTGTTCTTTGCATTTGTGGTATTGTTCTGATTGAAAGTCGTATGCTGTTACTTGGGATGGCAGATCTGAGAGAAGACGAGCAATTCCTTTTGGACTATCCTGGGGCATGTACAATATCAACGAAACAGGTCAATACTTTGGAGCTATTTCATTTTCCTTTTGAATCTCATTTTCCCTTTCTCCAAGTTTTTATGGAAAGGAACTGTACAAATTGTCTTTTTTCATATATATATTCAGGGGGAGGAACTTAAGAAGCTTATTGGAGCAGTGACATACATCGAGTGCAGTTCAAAGACCCAACAGGTTTTTTATTATTACCTCTTAATATAATAGAAACAAAAGATAATTAAACCTCACTTCCGAAAACCTAATCACCTCTTAATATAGTAAAAGCAAAAGATAATTAAACTGTAATTCTGAAAAAACTGATTTAAAGCAAATGTTTGTTTGTTTGTTTGTTACAAAATGCAAAGATCAAGAGCTAACCCCTAAGTAACTAACCAAACCAGTTTGGTTGGTTGAACTGTACCCATTGGCTAGTTTGATTTTCTGAAGTACAAAAAGGAAAGTGTTGGTCATTTTGGTTTTAAAATAATGAAAAATCTATTGGTTTTCAGATCAATTCAAAAATAAAACAAGATTTAAGCTATAAATTTTTAATGTGCTAGCATGAATGAGCTCAGTGAGACAAAGCTAGCTTTAACTGAATTTGAAGAGACTTGTTAACTCCTTTCTCTTAACCTGTGGCCCTTTTTTCTCTTGTTTTGAAGCCAAAGATAACAGTCCTTAAGATAATTTTAGTTTTAGTTTCCTCTCTGCTAAGTGAACCTCTTTTTATCAATGCAGAATGTAAAGGCTGTATTTGATGCTGCAATCAAGGTGGTTCTTCAACCTCCAAAAACCAAGAAGCCAAAGAGAAAACTCCCAATCTGCAATTTTCTATAATCATGTTTAATTAAGCCTCTCTCCAATACTTGTTTCATTTATTGAACTTCCCATATCACTTGTAATTGAACCATGTAGGTTAAATTTTATGATCTTTGGGGTGTATGTTAACAATTATGTTACTGTATCGTAATATATCAATTATTTGAAGGTGGGATATTTGAACATATGATCGTATCGTTGAGGATATCTGTTTCTATCATTAGTTTCGTTTTTGTACTTCCAAGTTTTGACGTTTAAAGAGAATCTAATACTAGTCTCGTTACAATCTAA ATTTGTAGAGTTGTTTATTAATATTACCAGTATGTATGGACGTCTATCTATAAATTTTTGTTATATATTACTAAAGAAAGAAACAAAATAATAAGAAATTGGATAAAAAAAATTAGAAAAAACAAGAAGTAATTAGTGATAGTAATAAAAGCAAGAACAATAATAATTTGGTGACCGTGGTTGTAGAAGCGCGCATCTGCATGGGGTGCTGGAACAATACAAAAGAAAACCACTCTTCAAAAATCTCTCATTTTCAATTCAATTTCCTCTACTACAATTGATACTCTCTTTGATTCATCTTTCTCTCTGTGGGGTTGCCTTCTGTTTCCCCTTTTCCCCTCTCTCACACCTCAATTTCAACCCCATTTTCACCAATCAATGCTTCTTTTTCTTTCTCATACCCTTTTTCAACCCTTCTTCCCACTTTTTTGTCCATCTTTTCCTCTCAATTCTCTCAATTTCCTCTTCCAAACATGCCATTCTAGGGTTTTAATACACATTACCTGTTCTTTCTTTAAATTCCGTTCAAAAAACAACCCTTTATGGCCGCCGCTACTCCTACGGCGGCTACAAAGTTCATCAAGTGCGTCACGGTTGGAGATGGCGCTGTTGGGAAGACTTGTCTTCTCATTTCTTACACTAGCAACACTTTTCCGACTGATTATGTTCCTACTGTTTTTGACAATTTCAGCGCCAATGTTTTGGTTAATGGGCAGTCTGTGAATTTGGGTCTCTGGGACACTGCTGGTCAAGAAGATTATAGCAGGCTAAGACCTTTGAGTTACAGAGGAGCTGATGTTTTCCTTCTTGCCTTTTCTATTATAAGTCGGGCCAGCTTTGAAAATATATCAAAGAAATGGATCCCAGAGTTAAGGCATTATGCCCCATCAGTACCCATTATTCTTCTCCTATTCGCCCCCCACCCACCCCTACCCCACAAACCTGTTCTTTGCATTTGTGGTATTGTTCTGATTGAAAGTCGTATGCTGTTACTTGGGATGGCAGATCTGAGAGAAGACGAGCAATTCCTTTTGGACTATCCTGGGGCATGTACAATATCAACGAAACAGGGGGAGGAACTTAAGAAGCTTATTGGAGCAGTGACATACATCGAGTGCAGTTCAAAGACCCAACAGAATGTAAAGGCTGTATTTGATGCTGCAATCAAGGTGGTTCTTCAACCTCCAAAAACCAAGAAGCCAAAGAGAAAACTCCCAATCTGCAATTTTCTATAATCATGTTTAATTAAGCCTCTCTCCAATACTTGTTTCATTTATTGAACTTCCCATATCACTTGTAATTGAACCATGTAGGTTAAATTTTATGATCTTTGGGGTGTATGTTAACAATTATGTTACTGTATCGTAATATATCAATTATTTGAAGGTGGGATATTTGAACATATGATCGTATCGTTGAGGATATCTGTTTCTATCATTAGTTTCGTTTTTGTACTTCCAAGTTTTGACGTTTAAAGAGAATCTAATACTAGTCTCGTTACAATCTAA ATGGCCGCCGCTACTCCTACGGCGGCTACAAAGTTCATCAAGTGCGTCACGGTTGGAGATGGCGCTGTTGGGAAGACTTGTCTTCTCATTTCTTACACTAGCAACACTTTTCCGACTGATTATGTTCCTACTGTTTTTGACAATTTCAGCGCCAATGTTTTGGTTAATGGGCAGTCTGTGAATTTGGGTCTCTGGGACACTGCTGGTCAAGAAGATTATAGCAGGCTAAGACCTTTGAGTTACAGAGGAGCTGATGTTTTCCTTCTTGCCTTTTCTATTATAAGTCGGGCCAGCTTTGAAAATATATCAAAGAAATGGATCCCAGAGTTAAGGCATTATGCCCCATCAGTACCCATTATTCTTCTCCTATTCGCCCCCCACCCACCCCTACCCCACAAACCTGTTCTTTGCATTTGTGGTATTGTTCTGATTGAAAGTCGTATGCTGTTACTTGGGATGGCAGATCTGAGAGAAGACGAGCAATTCCTTTTGGACTATCCTGGGGCATGTACAATATCAACGAAACAGGGGGAGGAACTTAAGAAGCTTATTGGAGCAGTGACATACATCGAGTGCAGTTCAAAGACCCAACAGAATGTAAAGGCTGTATTTGATGCTGCAATCAAGGTGGTTCTTCAACCTCCAAAAACCAAGAAGCCAAAGAGAAAACTCCCAATCTGCAATTTTCTATAA MAAATPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQEDYSRLRPLSYRGADVFLLAFSIISRASFENISKKWIPELRHYAPSVPIILLLFAPHPPLPHKPVLCICGIVLIESRMLLLGMADLREDEQFLLDYPGACTISTKQGEELKKLIGAVTYIECSSKTQQNVKAVFDAAIKVVLQPPKTKKPKRKLPICNFL
BLAST of CsGy3G010590.1 vs. NCBI nr
Match: XP_004133975.1 (PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis sativus] >KGN56701.1 hypothetical protein Csa_3G129580 [Cucumis sativus]) HSP 1 Score: 378.3 bits (970), Expect = 1.9e-101 Identity = 199/230 (86.52%), Postives = 200/230 (86.96%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. NCBI nr
Match: XP_008438307.1 (PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis melo]) HSP 1 Score: 370.9 bits (951), Expect = 3.1e-99 Identity = 195/230 (84.78%), Postives = 197/230 (85.65%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. NCBI nr
Match: XP_023527852.1 (rac-like GTP-binding protein 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 354.4 bits (908), Expect = 3.0e-94 Identity = 185/229 (80.79%), Postives = 193/229 (84.28%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. NCBI nr
Match: XP_022980411.1 (rac-like GTP-binding protein 5 [Cucurbita maxima]) HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93 Identity = 184/229 (80.35%), Postives = 192/229 (83.84%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. NCBI nr
Match: XP_022924269.1 (rac-like GTP-binding protein 5 [Cucurbita moschata]) HSP 1 Score: 350.5 bits (898), Expect = 4.3e-93 Identity = 183/229 (79.91%), Postives = 192/229 (83.84%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. TAIR10
Match: AT2G17800.1 (Arabidopsis RAC-like 1) HSP 1 Score: 301.2 bits (770), Expect = 5.4e-82 Identity = 153/216 (70.83%), Postives = 174/216 (80.56%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. TAIR10
Match: AT3G51300.1 (RHO-related protein from plants 1) HSP 1 Score: 301.2 bits (770), Expect = 5.4e-82 Identity = 152/216 (70.37%), Postives = 175/216 (81.02%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. TAIR10
Match: AT4G35950.1 (RAC-like 6) HSP 1 Score: 299.7 bits (766), Expect = 1.6e-81 Identity = 152/216 (70.37%), Postives = 174/216 (80.56%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. TAIR10
Match: AT1G20090.1 (RHO-related protein from plants 2) HSP 1 Score: 297.0 bits (759), Expect = 1.0e-80 Identity = 153/222 (68.92%), Postives = 172/222 (77.48%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. TAIR10
Match: AT1G75840.1 (RAC-like GTP binding protein 5) HSP 1 Score: 295.0 bits (754), Expect = 3.9e-80 Identity = 152/223 (68.16%), Postives = 173/223 (77.58%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. Swiss-Prot
Match: sp|Q40220|RAC2_LOTJA (Rac-like GTP-binding protein RAC2 OS=Lotus japonicus OX=34305 GN=RAC2 PE=2 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.4e-82 Identity = 157/223 (70.40%), Postives = 177/223 (79.37%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. Swiss-Prot
Match: sp|Q39435|RAC1_BETVU (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 3.0e-82 Identity = 156/216 (72.22%), Postives = 176/216 (81.48%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. Swiss-Prot
Match: sp|O04369|RAC1_LOTJA (Rac-like GTP-binding protein RAC1 OS=Lotus japonicus OX=34305 GN=RAC1 PE=2 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 4.4e-81 Identity = 156/216 (72.22%), Postives = 175/216 (81.02%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. Swiss-Prot
Match: sp|Q41253|RAC13_GOSHI (Rac-like GTP-binding protein RAC13 OS=Gossypium hirsutum OX=3635 GN=RAC13 PE=2 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 7.5e-81 Identity = 155/223 (69.51%), Postives = 176/223 (78.92%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. Swiss-Prot
Match: sp|Q41254|RAC9_GOSHI (Rac-like GTP-binding protein RAC9 OS=Gossypium hirsutum OX=3635 GN=RAC9 PE=2 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 7.5e-81 Identity = 154/221 (69.68%), Postives = 175/221 (79.19%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. TrEMBL
Match: tr|A0A0A0L9A9|A0A0A0L9A9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129580 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 1.3e-101 Identity = 199/230 (86.52%), Postives = 200/230 (86.96%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. TrEMBL
Match: tr|A0A1S3AW27|A0A1S3AW27_CUCME (rac-like GTP-binding protein RAC2 OS=Cucumis melo OX=3656 GN=LOC103483453 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 2.0e-99 Identity = 195/230 (84.78%), Postives = 197/230 (85.65%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. TrEMBL
Match: tr|A0A2G9HF23|A0A2G9HF23_9LAMI (Ras-related small GTPase, Rho type OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11250 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 1.7e-85 Identity = 170/228 (74.56%), Postives = 184/228 (80.70%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. TrEMBL
Match: tr|A0A067K1H1|A0A067K1H1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14659 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.4e-84 Identity = 169/233 (72.53%), Postives = 185/233 (79.40%), Query Frame = 0
BLAST of CsGy3G010590.1 vs. TrEMBL
Match: tr|A0A1R3HGZ6|A0A1R3HGZ6_COCAP (Small GTPase superfamily OS=Corchorus capsularis OX=210143 GN=CCACVL1_19355 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 2.4e-84 Identity = 164/220 (74.55%), Postives = 178/220 (80.91%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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