CsGy3G007270 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCGGAGGATTTGGAGAACGGAGAGTTTTACTTGAGATATTATGTGGGGCACAAAGGGAAATTTGGACACGAGTTCTTGGAGTTCGAATTTCGACCCGATGGAAAGCTTCGCTATGCTAACAACTCCAACTACAAGAACGATACCATGATTCGCAAGGAAGTCTACCTCACCCCTGCTGTCCTTCGGGAATGCCGTCGAATCATCTCCGATAGCGAGGTCAGGATCTTAACTTCTCTGTCCCTTCCTTTATGTCTTTAGGGTTTCCTTTATATCGCCATTTTTAGGGTTTTCTTCAACTTCATGGTGCGAGGGACAGATGGTCACCTTTCATTATTTCAAATAACTGGGGCTATCAACATCAATCTTCTCCAAATTAGGTCATCGGAGTAAAACCCTTTCTTCCAGCATTTCCATTTATTAAACTAGTTACAAATAATTCTTCATCGTGGGAAACGGGTATTTCTTTCGGTTTGCAACAAAATTTGAAAGTAATAAGTAAAATTGAACATCATAGACATAAGATCAAAGTTCACCATTTTTTGATGTCCGGGGGACGAAATAGTTTTGACACTCTTCGACAGAGTTCAATTTAAGCTTCGTTATTAGTTGTAACTTAAAGAAAGACCAGTACGCATATCAATAAGACTTCAAAATTTATGGAACGTGTTGAATCGAAGATGATCCGAAGTAGTGTGAGACAATATCTTAACTTTTGAAAGATGAAATTGGATCCCTTTTGTTTGACCAAATGAGAACACAATTGACAGAGGGAGATCAATCAAAGAAGGTCATAAAAAAACTTATATCTTGTATGTGATTTTCACTTGAAGATATCTTGCGACTCCAACCAGCAATAATGAAGTGACTGGGAAACGCACCACGCCGTGCACTGTAGTTAAAAAGAGCCTCAAGCTCATCTCAAAATCATATTTCAAAAGAATTTTACCACACCGGGGTCATTGAATTTTTTGGGTCTCCATATGCTGTTATTGAATGATCTTTCTCATAGATCCGATATATCACCCTCTTTTCTTAAGCCATGCAAAAGAAGACGAGATTGTTTTACTATTTGGATTTCGAACTTCTACTATTTTCTTCCTTACAGTCTTAAGAAAATGGCACCTTTTCGATTATGGAGGAAGATGTTGCGTTTCAAGTTTTTTGAGATTTTGTTTTGAGATAATGCATGTGAAGTGTTCTCGGAGTTAGTCTGTTAATCAATTCTCTTGAAATGCTTCGTTTTTATATCATCTAATAGAGTCCCAAATAATGAGGTTACTGTTGCATCTGTTCAGATTATGAAGGAAGATGATAATAATTGGCCAGAACCAGATCGGGTTGGACGACAGGAGCTTGAGATTGTGATGGGAAATGAGCATATCTCCTTCACCACGTCTAAGATTGGATCTCTTGTCGATGTGCAGAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGTAAGGCTTAGTCTTCCATGTAGATTACTTTTAAGCCATATCTATTTCCAGATTCTACGCATGGGTCATATATGCTTTTCTTTGGCTGTAGGATCTGAAATGCTTTGTCTTCTCTCTCATTTCACTCCACTTCAAGATCAAGCCAATTTAA ATGGCGGCGGAGGATTTGGAGAACGGAGAGTTTTACTTGAGATATTATGTGGGGCACAAAGGGAAATTTGGACACGAGTTCTTGGAGTTCGAATTTCGACCCGATGGAAAGCTTCGCTATGCTAACAACTCCAACTACAAGAACGATACCATGATTCGCAAGGAAGTCTACCTCACCCCTGCTGTCCTTCGGGAATGCCGTCGAATCATCTCCGATAGCGAGATTATGAAGGAAGATGATAATAATTGGCCAGAACCAGATCGGGTTGGACGACAGGAGCTTGAGATTGTGATGGGAAATGAGCATATCTCCTTCACCACGTCTAAGATTGGATCTCTTGTCGATGTGCAGAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGATCTGAAATGCTTTGTCTTCTCTCTCATTTCACTCCACTTCAAGATCAAGCCAATTTAA ATGGCGGCGGAGGATTTGGAGAACGGAGAGTTTTACTTGAGATATTATGTGGGGCACAAAGGGAAATTTGGACACGAGTTCTTGGAGTTCGAATTTCGACCCGATGGAAAGCTTCGCTATGCTAACAACTCCAACTACAAGAACGATACCATGATTCGCAAGGAAGTCTACCTCACCCCTGCTGTCCTTCGGGAATGCCGTCGAATCATCTCCGATAGCGAGATTATGAAGGAAGATGATAATAATTGGCCAGAACCAGATCGGGTTGGACGACAGGAGCTTGAGATTGTGATGGGAAATGAGCATATCTCCTTCACCACGTCTAAGATTGGATCTCTTGTCGATGTGCAGAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGATCTGAAATGCTTTGTCTTCTCTCTCATTTCACTCCACTTCAAGATCAAGCCAATTTAA MAAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
BLAST of CsGy3G007270 vs. NCBI nr
Match: XP_004133764.1 (PREDICTED: protein mago nashi homolog [Cucumis sativus] >KGN56341.1 hypothetical protein Csa_3G116780 [Cucumis sativus]) HSP 1 Score: 313.5 bits (802), Expect = 3.8e-82 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsGy3G007270 vs. NCBI nr
Match: XP_008437772.1 (PREDICTED: protein mago nashi homolog [Cucumis melo]) HSP 1 Score: 312.4 bits (799), Expect = 8.6e-82 Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsGy3G007270 vs. NCBI nr
Match: XP_022933981.1 (protein mago nashi homolog [Cucurbita moschata] >XP_022968427.1 protein mago nashi homolog [Cucurbita maxima] >XP_023531858.1 protein mago nashi homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 311.6 bits (797), Expect = 1.5e-81 Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsGy3G007270 vs. NCBI nr
Match: XP_022949012.1 (protein mago nashi homolog [Cucurbita moschata] >XP_022974248.1 protein mago nashi homolog [Cucurbita maxima] >XP_022975255.1 protein mago nashi homolog [Cucurbita maxima] >XP_023540895.1 protein mago nashi homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 310.8 bits (795), Expect = 2.5e-81 Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CsGy3G007270 vs. NCBI nr
Match: XP_022133206.1 (protein mago nashi homolog [Momordica charantia]) HSP 1 Score: 308.9 bits (790), Expect = 9.5e-81 Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of CsGy3G007270 vs. TAIR10
Match: AT1G02140.1 (mago nashi family protein) HSP 1 Score: 276.2 bits (705), Expect = 1.2e-74 Identity = 134/152 (88.16%), Postives = 143/152 (94.08%), Query Frame = 0
BLAST of CsGy3G007270 vs. Swiss-Prot
Match: sp|P49030|MGN2_ORYSJ (Protein mago nashi homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MAGO2 PE=1 SV=2) HSP 1 Score: 285.4 bits (729), Expect = 3.7e-76 Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 0
BLAST of CsGy3G007270 vs. Swiss-Prot
Match: sp|O65806|MGN_EUPLA (Protein mago nashi homolog OS=Euphorbia lagascae OX=54672 PE=2 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.2e-74 Identity = 135/146 (92.47%), Postives = 141/146 (96.58%), Query Frame = 0
BLAST of CsGy3G007270 vs. Swiss-Prot
Match: sp|O23676|MGN_ARATH (Protein mago nashi homolog OS=Arabidopsis thaliana OX=3702 GN=MAGO PE=1 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 2.2e-73 Identity = 134/152 (88.16%), Postives = 143/152 (94.08%), Query Frame = 0
BLAST of CsGy3G007270 vs. Swiss-Prot
Match: sp|A0A0P0XB70|MGN1_ORYSJ (Protein mago nashi homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MAGO1 PE=1 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 8.4e-73 Identity = 131/143 (91.61%), Postives = 139/143 (97.20%), Query Frame = 0
BLAST of CsGy3G007270 vs. Swiss-Prot
Match: sp|Q566Y8|MGN_DANRE (Protein mago nashi homolog OS=Danio rerio OX=7955 GN=magoh PE=2 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 5.9e-66 Identity = 119/147 (80.95%), Postives = 129/147 (87.76%), Query Frame = 0
BLAST of CsGy3G007270 vs. TrEMBL
Match: tr|A0A0A0L898|A0A0A0L898_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116780 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 2.5e-82 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsGy3G007270 vs. TrEMBL
Match: tr|A0A1S3AVD6|A0A1S3AVD6_CUCME (protein mago nashi homolog OS=Cucumis melo OX=3656 GN=LOC103483105 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 5.7e-82 Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsGy3G007270 vs. TrEMBL
Match: tr|A0A2P5A7U9|A0A2P5A7U9_PARAD (Mago nashi protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_360010 PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 7.6e-79 Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of CsGy3G007270 vs. TrEMBL
Match: tr|A0A2P2JK15|A0A2P2JK15_RHIMU (Protein mago nashi isogeny OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 1.0e-78 Identity = 147/152 (96.71%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CsGy3G007270 vs. TrEMBL
Match: tr|A0A2P5FBD8|A0A2P5FBD8_9ROSA (Mago nashi protein OS=Trema orientalis OX=63057 GN=TorRG33x02_089930 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.7e-78 Identity = 145/152 (95.39%), Postives = 148/152 (97.37%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|