CsGy2G009640 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G009640
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionnuclear pore complex protein NUP160 isoform X2
LocationChr2 : 9116373 .. 9117672 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCGTAGGATGCCGTTGGCCGGAATGGAAACCTCTATCATGGCTACCGACTCTGTAGAATTCATTGGCGTTTCTGTTCCTTCTTCCTCATCAAGAGAGGCTGCCATTACTTCCGTTGCTTCTCAAGCTACCACCTCATTGACTGAGGACCATACCTCCTGCGTTGTCGTAGGAGATCCTCCAACCTATCTTATCTGGTATGCTACTTTTTCCCTCACACTTTATTGATTCCGTTCTTCGGTGCAAACAAGCCCAATTCCTCTTCCATTCTTCTTCCGCAACAGGAGGATTCGGAAGATTCTACCTCATGTAGTAGAGTTGCTTGAGTTTTCAACTTCCAACGAGTTTTGTAGGACTGGTTTGCGAATTGCCTTTCCTGAAACACTTCACCCGGCCGTTTTTGTTTGCAAAAATGAGGTTAGTTTCCATTTTCCTAGTCTCAACTTTCAGCCTGTTTGAATCTTTCAATGGATTATTAATTGCCGAGGAATGCTGCAGATTAGTTCGTCTATGGGACATCCTTTCTTGATGTATGCAGTGACTTCGTCCGGTTTCGCTTATTGTTTGAAGCTGCGAAATCTATCCTCATATGTATCCTACTCTGCCATTCCGCTCGATGAGGTTGTGGAGTTTAATCTGCAAACCCATCCGGACAACAAACCAGTAACCAGCGTATCTGCTATATCTGGATGTCTTGTGATAGGGAGAAATGATGGATCAGTTTCATGTTACAAACTTGGGTCGCTTGACCAACATTCCCCTGGTATGTTTACTTTTCTGTGCATCAAGTGGCTACATTCTGTATTGTTATTTGTCCAAATATGATTGTGAAAGTGGGCGAATGAAGCTTCTTTACCTGTTGTAATTTGTCCAAATATGATTGAGAATATGGGCAAATGGCTTACTTTTCATACCATTAGGAAGCTCTTTATGATCCAGAACCGGGACTTGTCTTAAAAGTTAAAACCGTAGGAAGTTCTTTGACAATTGCGAATTACCTTCTTGTTTTACTATTTCAAAATCGTTATTATTGTTCATTACTACTTAGGCTGTGCCACAGGGATGTAAATGCAAACTTACAGCTACCTCCAATTCGTTTTACTTCTTTACTTTTTGTGCCACGCTTATTTAGAATCCTTAAAACCTGTATTATTTTGTTACATTTAAGCTGTATATCTAACAATGGCTGTTTATTTACCTTCTAGGCTTTGAACATGAACTACGAGATGATTCAGGATTCAATCGTCTGTTGGGTTTCATTTCAAGGTTCCCATTTATGAAATATCACATGATATAG

mRNA sequence

ATGGGGCGTAGGATGCCGTTGGCCGGAATGGAAACCTCTATCATGGCTACCGACTCTGTAGAATTCATTGGCGTTTCTGTTCCTTCTTCCTCATCAAGAGAGGCTGCCATTACTTCCGTTGCTTCTCAAGCTACCACCTCATTGACTGAGGACCATACCTCCTGCGTTGTCGTAGGAGATCCTCCAACCTATCTTATCTGGAGGATTCGGAAGATTCTACCTCATGTAGTAGAGTTGCTTGAGTTTTCAACTTCCAACGAGTTTTGTAGGACTGGTTTGCGAATTGCCTTTCCTGAAACACTTCACCCGGCCGTTTTTGTTTGCAAAAATGAGATTAGTTCGTCTATGGGACATCCTTTCTTGATGTATGCAGTGACTTCGTCCGGTTTCGCTTATTGTTTGAAGCTGCGAAATCTATCCTCATATGTATCCTACTCTGCCATTCCGCTCGATGAGGTTGTGGAGTTTAATCTGCAAACCCATCCGGACAACAAACCAGTAACCAGCGTATCTGCTATATCTGGATGTCTTGTGATAGGGAGAAATGATGGATCAGTTTCATGTTACAAACTTGGGTCGCTTGACCAACATTCCCCTGGCTTTGAACATGAACTACGAGATGATTCAGGATTCAATCGTCTGTTGGGTTTCATTTCAAGGTTCCCATTTATGAAATATCACATGATATAG

Coding sequence (CDS)

ATGGGGCGTAGGATGCCGTTGGCCGGAATGGAAACCTCTATCATGGCTACCGACTCTGTAGAATTCATTGGCGTTTCTGTTCCTTCTTCCTCATCAAGAGAGGCTGCCATTACTTCCGTTGCTTCTCAAGCTACCACCTCATTGACTGAGGACCATACCTCCTGCGTTGTCGTAGGAGATCCTCCAACCTATCTTATCTGGAGGATTCGGAAGATTCTACCTCATGTAGTAGAGTTGCTTGAGTTTTCAACTTCCAACGAGTTTTGTAGGACTGGTTTGCGAATTGCCTTTCCTGAAACACTTCACCCGGCCGTTTTTGTTTGCAAAAATGAGATTAGTTCGTCTATGGGACATCCTTTCTTGATGTATGCAGTGACTTCGTCCGGTTTCGCTTATTGTTTGAAGCTGCGAAATCTATCCTCATATGTATCCTACTCTGCCATTCCGCTCGATGAGGTTGTGGAGTTTAATCTGCAAACCCATCCGGACAACAAACCAGTAACCAGCGTATCTGCTATATCTGGATGTCTTGTGATAGGGAGAAATGATGGATCAGTTTCATGTTACAAACTTGGGTCGCTTGACCAACATTCCCCTGGCTTTGAACATGAACTACGAGATGATTCAGGATTCAATCGTCTGTTGGGTTTCATTTCAAGGTTCCCATTTATGAAATATCACATGATATAG

Protein sequence

MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGDPPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPFLMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIGRNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISRFPFMKYHMI
Homology
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BLAST of CsGy2G009640 vs. NCBI nr
Match: KGN61507.1 (hypothetical protein Csa_2G150000 [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 9.1e-120
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 

Query: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60
           MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD
Sbjct: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60

Query: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
           PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF
Sbjct: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120

Query: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
           LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180

Query: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 221
           RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR
Sbjct: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 220

[Close]
BLAST of CsGy2G009640 vs. NCBI nr
Match: XP_011649106.1 (PREDICTED: nuclear pore complex protein NUP160 isoform X1 [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 9.1e-120
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 

Query: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60
           MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD
Sbjct: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60

Query: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
           PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF
Sbjct: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120

Query: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
           LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180

Query: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 221
           RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR
Sbjct: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 220

[Close]
BLAST of CsGy2G009640 vs. NCBI nr
Match: XP_011649107.1 (PREDICTED: nuclear pore complex protein NUP160 isoform X2 [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 9.1e-120
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 

Query: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60
           MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD
Sbjct: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60

Query: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
           PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF
Sbjct: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120

Query: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
           LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180

Query: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 221
           RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR
Sbjct: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 220

[Close]
BLAST of CsGy2G009640 vs. NCBI nr
Match: XP_011649108.1 (PREDICTED: nuclear pore complex protein NUP160 isoform X3 [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 9.1e-120
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 

Query: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60
           MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD
Sbjct: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60

Query: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
           PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF
Sbjct: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120

Query: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
           LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180

Query: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 221
           RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR
Sbjct: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 220

[Close]
BLAST of CsGy2G009640 vs. NCBI nr
Match: XP_011649109.1 (PREDICTED: nuclear pore complex protein NUP160 isoform X4 [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 9.1e-120
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 

Query: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60
           MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD
Sbjct: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60

Query: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
           PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF
Sbjct: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120

Query: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
           LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180

Query: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 221
           RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR
Sbjct: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 220

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BLAST of CsGy2G009640 vs. TAIR10
Match: AT1G33410.1 (SUPPRESSOR OF AUXIN RESISTANCE1)

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-35
Identity = 86/217 (39.63%), Postives = 126/217 (58.06%), Query Frame = 0 

Query: 3   RRMPLAGMETSIMATDS-VEFIGVSVPSSSSREAAITSVASQ----ATTSLTEDHTSCVV 62
           RR P AGME  +    + V++I +SVPS S   ++I + +S+        L+ED+ S  V
Sbjct: 5   RRNPSAGMEVPVAGGGNVVKWIEISVPSPSVSSSSIGANSSEDNECVQLPLSEDYASSSV 64

Query: 63  VGDPPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMG 122
           +G+P    +WRI K  P+ +ELL+ S  + F  TGLR  F +TL P  FV  +E   S  
Sbjct: 65  IGEPSISFVWRINKTSPNALELLQLSAKSGFPITGLRFVFAQTLSPFAFVYADEGGDSGR 124

Query: 123 HPFLMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCL 182
             + +Y++T SG  Y LKL N  +Y S S  PLD ++  +++ + +   VTSV+A  G +
Sbjct: 125 LVYFLYSLTPSGVVYVLKLSNTLAYKSGSVFPLDHLIHLDVRPYLNESRVTSVAASPGFI 184

Query: 183 VIGRNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRL 215
            +GR+DG VSC++     Q S GF  ELRDD+GF RL
Sbjct: 185 FLGRSDGCVSCFQPIVYFQKSSGFHQELRDDTGFGRL 221

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BLAST of CsGy2G009640 vs. Swiss-Prot
Match: sp|Q9C811|NU160_ARATH (Nuclear pore complex protein NUP160 OS=Arabidopsis thaliana OX=3702 GN=NUP160 PE=1 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 1.8e-34
Identity = 86/217 (39.63%), Postives = 126/217 (58.06%), Query Frame = 0 

Query: 3   RRMPLAGMETSIMATDS-VEFIGVSVPSSSSREAAITSVASQ----ATTSLTEDHTSCVV 62
           RR P AGME  +    + V++I +SVPS S   ++I + +S+        L+ED+ S  V
Sbjct: 5   RRNPSAGMEVPVAGGGNVVKWIEISVPSPSVSSSSIGANSSEDNECVQLPLSEDYASSSV 64

Query: 63  VGDPPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMG 122
           +G+P    +WRI K  P+ +ELL+ S  + F  TGLR  F +TL P  FV  +E   S  
Sbjct: 65  IGEPSISFVWRINKTSPNALELLQLSAKSGFPITGLRFVFAQTLSPFAFVYADEGGDSGR 124

Query: 123 HPFLMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCL 182
             + +Y++T SG  Y LKL N  +Y S S  PLD ++  +++ + +   VTSV+A  G +
Sbjct: 125 LVYFLYSLTPSGVVYVLKLSNTLAYKSGSVFPLDHLIHLDVRPYLNESRVTSVAASPGFI 184

Query: 183 VIGRNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRL 215
            +GR+DG VSC++     Q S GF  ELRDD+GF RL
Sbjct: 185 FLGRSDGCVSCFQPIVYFQKSSGFHQELRDDTGFGRL 221

[Close]
BLAST of CsGy2G009640 vs. TrEMBL
Match: tr|A0A0A0LLC2|A0A0A0LLC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G150000 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 6.0e-120
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 

Query: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60
           MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD
Sbjct: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60

Query: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
           PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF
Sbjct: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120

Query: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
           LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180

Query: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 221
           RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR
Sbjct: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 220

[Close]
BLAST of CsGy2G009640 vs. TrEMBL
Match: tr|A0A1S3C516|A0A1S3C516_CUCME (nuclear pore complex protein NUP160 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103496931 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 7.6e-115
Identity = 211/220 (95.91%), Postives = 215/220 (97.73%), Query Frame = 0 

Query: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60
           MGRRMPLAGMETS+MA DSVEFIGVSVPSSSSR+A+ITSVASQATTSLTEDH SCVVVGD
Sbjct: 1   MGRRMPLAGMETSVMANDSVEFIGVSVPSSSSRDASITSVASQATTSLTEDHASCVVVGD 60

Query: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
           PPTYLIW IRKILPHVVELLEFSTSNEF R GLRIAFPETLHPAVFVCKNEISSSMGHPF
Sbjct: 61  PPTYLIWSIRKILPHVVELLEFSTSNEFRRIGLRIAFPETLHPAVFVCKNEISSSMGHPF 120

Query: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
           LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180

Query: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 221
           RNDGSVSCYKLGSLDQH+PGFEHELRDDSGFNRLLGFISR
Sbjct: 181 RNDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISR 220

[Close]
BLAST of CsGy2G009640 vs. TrEMBL
Match: tr|A0A1S3C4Y2|A0A1S3C4Y2_CUCME (nuclear pore complex protein NUP160 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496931 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 7.6e-115
Identity = 211/220 (95.91%), Postives = 215/220 (97.73%), Query Frame = 0 

Query: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60
           MGRRMPLAGMETS+MA DSVEFIGVSVPSSSSR+A+ITSVASQATTSLTEDH SCVVVGD
Sbjct: 1   MGRRMPLAGMETSVMANDSVEFIGVSVPSSSSRDASITSVASQATTSLTEDHASCVVVGD 60

Query: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
           PPTYLIW IRKILPHVVELLEFSTSNEF R GLRIAFPETLHPAVFVCKNEISSSMGHPF
Sbjct: 61  PPTYLIWSIRKILPHVVELLEFSTSNEFRRIGLRIAFPETLHPAVFVCKNEISSSMGHPF 120

Query: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
           LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180

Query: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 221
           RNDGSVSCYKLGSLDQH+PGFEHELRDDSGFNRLLGFISR
Sbjct: 181 RNDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISR 220

[Close]
BLAST of CsGy2G009640 vs. TrEMBL
Match: tr|A0A1S3C5M5|A0A1S3C5M5_CUCME (nuclear pore complex protein NUP160 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496931 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 7.6e-115
Identity = 211/220 (95.91%), Postives = 215/220 (97.73%), Query Frame = 0 

Query: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60
           MGRRMPLAGMETS+MA DSVEFIGVSVPSSSSR+A+ITSVASQATTSLTEDH SCVVVGD
Sbjct: 1   MGRRMPLAGMETSVMANDSVEFIGVSVPSSSSRDASITSVASQATTSLTEDHASCVVVGD 60

Query: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
           PPTYLIW IRKILPHVVELLEFSTSNEF R GLRIAFPETLHPAVFVCKNEISSSMGHPF
Sbjct: 61  PPTYLIWSIRKILPHVVELLEFSTSNEFRRIGLRIAFPETLHPAVFVCKNEISSSMGHPF 120

Query: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
           LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180

Query: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 221
           RNDGSVSCYKLGSLDQH+PGFEHELRDDSGFNRLLGFISR
Sbjct: 181 RNDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISR 220

[Close]
BLAST of CsGy2G009640 vs. TrEMBL
Match: tr|A0A1S3C685|A0A1S3C685_CUCME (nuclear pore complex protein NUP160 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103496931 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 7.6e-115
Identity = 211/220 (95.91%), Postives = 215/220 (97.73%), Query Frame = 0 

Query: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSLTEDHTSCVVVGD 60
           MGRRMPLAGMETS+MA DSVEFIGVSVPSSSSR+A+ITSVASQATTSLTEDH SCVVVGD
Sbjct: 1   MGRRMPLAGMETSVMANDSVEFIGVSVPSSSSRDASITSVASQATTSLTEDHASCVVVGD 60

Query: 61  PPTYLIWRIRKILPHVVELLEFSTSNEFCRTGLRIAFPETLHPAVFVCKNEISSSMGHPF 120
           PPTYLIW IRKILPHVVELLEFSTSNEF R GLRIAFPETLHPAVFVCKNEISSSMGHPF
Sbjct: 61  PPTYLIWSIRKILPHVVELLEFSTSNEFRRIGLRIAFPETLHPAVFVCKNEISSSMGHPF 120

Query: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180
           LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG
Sbjct: 121 LMYAVTSSGFAYCLKLRNLSSYVSYSAIPLDEVVEFNLQTHPDNKPVTSVSAISGCLVIG 180

Query: 181 RNDGSVSCYKLGSLDQHSPGFEHELRDDSGFNRLLGFISR 221
           RNDGSVSCYKLGSLDQH+PGFEHELRDDSGFNRLLGFISR
Sbjct: 181 RNDGSVSCYKLGSLDQHTPGFEHELRDDSGFNRLLGFISR 220

The following BLAST results are available for this feature:
BLAST of CsGy2G009640 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61507.19.1e-120100.00hypothetical protein Csa_2G150000 [Cucumis sativus][more]
XP_011649106.19.1e-120100.00PREDICTED: nuclear pore complex protein NUP160 isoform X1 [Cucumis sativus][more]
XP_011649107.19.1e-120100.00PREDICTED: nuclear pore complex protein NUP160 isoform X2 [Cucumis sativus][more]
XP_011649108.19.1e-120100.00PREDICTED: nuclear pore complex protein NUP160 isoform X3 [Cucumis sativus][more]
XP_011649109.19.1e-120100.00PREDICTED: nuclear pore complex protein NUP160 isoform X4 [Cucumis sativus][more]
BLAST of CsGy2G009640 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G33410.11.0e-3539.63SUPPRESSOR OF AUXIN RESISTANCE1[more]
BLAST of CsGy2G009640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9C811|NU160_ARATH1.8e-3439.63Nuclear pore complex protein NUP160 OS=Arabidopsis thaliana OX=3702 GN=NUP160 PE... [more]
BLAST of CsGy2G009640 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LLC2|A0A0A0LLC2_CUCSA6.0e-120100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G150000 PE=4 SV=1[more]
tr|A0A1S3C516|A0A1S3C516_CUCME7.6e-11595.91nuclear pore complex protein NUP160 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A1S3C4Y2|A0A1S3C4Y2_CUCME7.6e-11595.91nuclear pore complex protein NUP160 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A1S3C5M5|A0A1S3C5M5_CUCME7.6e-11595.91nuclear pore complex protein NUP160 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A1S3C685|A0A1S3C685_CUCME7.6e-11595.91nuclear pore complex protein NUP160 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021717Nucleoporin_Nup160
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G009640.1CsGy2G009640.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021717Nucleoporin Nup120/160PANTHERPTHR21286NUCLEAR PORE COMPLEX PROTEIN NUP160coord: 25..219

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G009640Cucurbita moschata (Rifu)cgybcmoB186
CsGy2G009640Cucurbita pepo (Zucchini)cgybcpeB175
CsGy2G009640Cucumber (Chinese Long) v2cgybcuB056
CsGy2G009640Melon (DHL92) v3.5.1cgybmeB115
CsGy2G009640Melon (DHL92) v3.6.1cgybmedB114
CsGy2G009640Wild cucumber (PI 183967)cgybcpiB056
CsGy2G009640Cucumber (Chinese Long) v3cgybcucB064