CsGy2G008620 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACCAAATATTTCATCATAATTATTGACGACAACTTCAGCTGTGGTTCTTCACGGGAGCACGCGTTGGTTGCGTTGGGAGCGTCCGACGTTGTGGCGATAGTGGATGAATCTTATGCACATATTTTCTTCACAGCAAACTCCGTGGCAACTAGAGAGATTTATCCATTGAAATCGGAGACTAGAATTTCTGCGAATTTTAAAATTAAAAAATAA ATGAAAACCAAATATTTCATCATAATTATTGACGACAACTTCAGCTGTGGTTCTTCACGGGAGCACGCGTTGGTTGCGTTGGGAGCGTCCGACGTTGTGGCGATAGTGGATGAATCTTATGCACATATTTTCTTCACAGCAAACTCCGTGGCAACTAGAGAGATTTATCCATTGAAATCGGAGACTAGAATTTCTGCGAATTTTAAAATTAAAAAATAA ATGAAAACCAAATATTTCATCATAATTATTGACGACAACTTCAGCTGTGGTTCTTCACGGGAGCACGCGTTGGTTGCGTTGGGAGCGTCCGACGTTGTGGCGATAGTGGATGAATCTTATGCACATATTTTCTTCACAGCAAACTCCGTGGCAACTAGAGAGATTTATCCATTGAAATCGGAGACTAGAATTTCTGCGAATTTTAAAATTAAAAAATAA MKTKYFIIIIDDNFSCGSSREHALVALGASDVVAIVDESYAHIFFTANSVATREIYPLKSETRISANFKIKK
BLAST of CsGy2G008620 vs. NCBI nr
Match: KGN50267.1 (hypothetical protein Csa_5G162650 [Cucumis sativus]) HSP 1 Score: 102.8 bits (255), Expect = 4.9e-19 Identity = 52/70 (74.29%), Postives = 56/70 (80.00%), Query Frame = 0
BLAST of CsGy2G008620 vs. NCBI nr
Match: XP_004152394.1 (PREDICTED: 3-isopropylmalate dehydratase small subunit 3 [Cucumis sativus] >KGN50272.1 hypothetical protein Csa_5G165170 [Cucumis sativus]) HSP 1 Score: 91.7 bits (226), Expect = 1.1e-15 Identity = 51/69 (73.91%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of CsGy2G008620 vs. NCBI nr
Match: XP_008437054.1 (PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Cucumis melo]) HSP 1 Score: 91.7 bits (226), Expect = 1.1e-15 Identity = 50/64 (78.12%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of CsGy2G008620 vs. NCBI nr
Match: XP_022922281.1 (3-isopropylmalate dehydratase small subunit 3-like [Cucurbita moschata]) HSP 1 Score: 89.4 bits (220), Expect = 5.6e-15 Identity = 49/64 (76.56%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of CsGy2G008620 vs. NCBI nr
Match: XP_022972989.1 (3-isopropylmalate dehydratase small subunit 3-like [Cucurbita maxima]) HSP 1 Score: 89.4 bits (220), Expect = 5.6e-15 Identity = 49/64 (76.56%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of CsGy2G008620 vs. TAIR10
Match: AT2G43090.1 (Aconitase/3-isopropylmalate dehydratase protein) HSP 1 Score: 79.3 bits (194), Expect = 1.0e-15 Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0
BLAST of CsGy2G008620 vs. TAIR10
Match: AT3G58990.1 (isopropylmalate isomerase 1) HSP 1 Score: 78.2 bits (191), Expect = 2.3e-15 Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0
BLAST of CsGy2G008620 vs. TAIR10
Match: AT2G43100.1 (isopropylmalate isomerase 2) HSP 1 Score: 75.5 bits (184), Expect = 1.5e-14 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of CsGy2G008620 vs. Swiss-Prot
Match: sp|Q9ZW85|LEUD3_ARATH (3-isopropylmalate dehydratase small subunit 3 OS=Arabidopsis thaliana OX=3702 GN=At2g43090 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 1.9e-14 Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0
BLAST of CsGy2G008620 vs. Swiss-Prot
Match: sp|Q9LYT7|LEUD2_ARATH (3-isopropylmalate dehydratase small subunit 2 OS=Arabidopsis thaliana OX=3702 GN=IPMI1 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 4.2e-14 Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0
BLAST of CsGy2G008620 vs. Swiss-Prot
Match: sp|Q9ZW84|LEUD1_ARATH (3-isopropylmalate dehydratase small subunit 1 OS=Arabidopsis thaliana OX=3702 GN=IPMI2 PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 2.7e-13 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of CsGy2G008620 vs. Swiss-Prot
Match: sp|Q0QLE1|DMDB_EUBBA (2,3-dimethylmalate dehydratase small subunit OS=Eubacterium barkeri OX=1528 GN=DmdB PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 3.6e-05 Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 0
BLAST of CsGy2G008620 vs. Swiss-Prot
Match: sp|B1H0A5|LEUD_UNCTG (3-isopropylmalate dehydratase small subunit OS=Uncultured termite group 1 bacterium phylotype Rs-D17 OX=471821 GN=leuD PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 3.6e-05 Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0
BLAST of CsGy2G008620 vs. TrEMBL
Match: tr|A0A0A0KPA8|A0A0A0KPA8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162650 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.2e-19 Identity = 52/70 (74.29%), Postives = 56/70 (80.00%), Query Frame = 0
BLAST of CsGy2G008620 vs. TrEMBL
Match: tr|A0A1S3AT32|A0A1S3AT32_CUCME (3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo OX=3656 GN=LOC103482595 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.4e-16 Identity = 50/64 (78.12%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of CsGy2G008620 vs. TrEMBL
Match: tr|A0A0A0KPB2|A0A0A0KPB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165170 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.4e-16 Identity = 51/69 (73.91%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of CsGy2G008620 vs. TrEMBL
Match: tr|A0A2C9WIS8|A0A2C9WIS8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G082700 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.1e-14 Identity = 47/69 (68.12%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of CsGy2G008620 vs. TrEMBL
Match: tr|A0A218XNA1|A0A218XNA1_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr021510 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.8e-14 Identity = 48/69 (69.57%), Postives = 52/69 (75.36%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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