CsGy2G003450 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTTAATTTTCATCACTTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCGTCACAAACCCTTCAAGACAGCATTAAAGCTGCTGTTGAATCAAAGTCGTATAAGAAACTTCCTGATCTGTTTCCTTCATTGCAAGAAGCTTGCCACAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGACCTCGCTCAAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAAAGTCCTTCACCTTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGGTTGTGTCCCTTCCCCTCAGACTCATTTTCTACTTTCTTCTGCCTGGCTAAAACAACGTAGCCAGGCTAAGTCTGTTGCTAATATCTTGATGGATATGCAGTCAATTGGTTATAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTATTCCTGACTTGGAGAGTTATGGCACCTTAATTCATGCAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTGAAAGTTAAATTGATGCCAAGACAAGGAACGATTACTAACGTTGTGGCCGCGTTACGAACAAACCGAGAGGTAAGGAGAGCAGTTGAGATTATTGAGCTGTTGGAGAGGGACAGTCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCGGGAAAGGTGACCATGGGGATGACAGACAGAGGGTTTATACCATATATCAAGGTCAGGCAAGAGGTTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTTGCTTCTGCTGTAAGACGCAGATTTGTAGAGTTGGGGTCTTAGATACTATAAATTCTTTTTATATCTTGTTCTCAAATATATATATGAAATCCAAATGGCATGTGGAGAAGATTTAGAGAAGAATTTTTCACGATAAATACTCCTTGAATATGTTCAAATTTTATTGTGCTTGAATCCTTTATTTTCTTTTGACTTTTTGGTGCTCATACACAATAACCTTTTACCAATTCTTATTGCATCACTATAGAATATAATTTAGTGAATGTAAAAATCTGCATGGTAAATTTAATTTTTTCACCTCTGAAGGTAGACATGTTCAATTAACACCAGGAAGTACCTTGCTTGTGGTTGAATCACGCTTCATTCTTATTCTTATGTAACTTGATTCACCCTAGCCAATGCCCCATGAATTCTTGACAAGTCAATAAGCTTTATTGCTAGCTTCCCTATACTCAACTATTGTTCCTTCACGATTCAGTTGCTCAATTGCTTGAGAAAATTCCACTAGAATAGAACTGAAAATTGTTCCCCCTGCATCAATTGCTACAGAGGCTGGCTGTTTAGCAATTGTTGGCTTTCTGCTTTTTAGCTTTTCTCATTGTTGACGAGTACTTTTTCATATCCACTTATTGACACAGACTGGTATTTCGCTTTTTGTTTGTTGCATGCAGATTCAGTTCTTTTGTATGGATATTCTGTTTTTGTAGTTAGACTAGTTTTCTTGATGAACTCAAATGCTTTATATATGTAACCACCACTGCATTCCTGGTTCCCCGAGGTCACATCGTAGTCTACAAGCTCTTGTTCTGGAAGAGACATCAATTTCCCTGTTTTTATTTTGTTGATGCCTTCAACTGCTGCTACTGCAGAGAATGCCCAGCAGCTCCATGTGTTGAAAATTCAAGACTGGTAAGTTTTTCCAAATATGACGAAATGACTTTAAATAGATAGAGGGCCAGGTTTAGGGTACTTGTTAGGAAAAAAACTCATAATCAGACGTAAAGAGAACATGATCAACGTATTTTTGTTTAGTTGGATGAATAAGAGTATTACTAGTTCGTACCACATTGGCCTTGATTCTTTATCGGGGTAATTGCACCGTCCTTTCTCCAATCAACGTTAGTAGGCAGATTAACGGTATTTTCATATTCAAATAATGTATATGGAAGCGAAAAAGTTTTATACCCCAAGTAAGTTGCCTTAAACTAATCTGTGAGATCTGCATAGTTAATTTTAACCAAAGTATATGAATGATTCAAAGAATTGAGATTGACAATGTACTTTGCTAAGAAGCACAAATACTTTAGTTTGGTTAACATGTCCATGTTCGACACTTGAAAAATTGACACTTGATAGATACGTAGCATACATTTGTCAATGCAACAAATGTATTAGACATGTGTAAGTATTTTTTGAAAAGAATATTTTAATAAACGTGGATTCATAAAGTTTTCAAATATAACAATAGCCATATTCGTGTGATATATGTATTTATGTTTTCTAGGGTGTATGTTTAGGACTTGATTTTAGAAAGAAAAAAAATGTTCCAAGTACAGTTGATTTTATAAAATTGATTTTCAAACACTAAATTCTTTTTTTATAACAAACTTAAAATTGATTTTCAATAGTTATGTTTTAAAAGTGATTTAACAGCTATCGGAATTATTAAAAATATTTTTTTGGGTATTTAAAAACTATTTAAAATAAGTTGTGATTTTTGGTTGATCACATTTTCATAATCACTAGAGAGATGATGTTTCAAAAATGATTTTTGAGTGATTTCTTGTTTTCCTAAAGTAACTTTTTATAGGCTTTCAAACACTATATTTTTATGCAAAAGTGATTTTGGTTAGTGAAAAAATATGTCAAAATCAATCCATAACACTCCTAGATAATTTGGAGTACTTACCTTTCTATATCCAACTGACAGATTTATTAGAAAAATTTCTTCATAGGGACATAAGATCATGAATTGAGATGTTTTCTATTACAACATGGTTCGTAGGCCTCAGTGGCAACTTATATATTGGAACGAAGTCATGTCTTTAATTAGAAGCTAAACAATTACCCATACAGATTCTTTCAGTTTCAACAAGAAGTCTTTACTTTAGAACTCGAAAAATAA ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTTAATTTTCATCACTTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCGTCACAAACCCTTCAAGACAGCATTAAAGCTGCTGTTGAATCAAAGTCGTATAAGAAACTTCCTGATCTGTTTCCTTCATTGCAAGAAGCTTGCCACAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGACCTCGCTCAAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAAAGTCCTTCACCTTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGGTTGTGTCCCTTCCCCTCAGACTCATTTTCTACTTTCTTCTGCCTGGCTAAAACAACGTAGCCAGGCTAAGTCTGTTGCTAATATCTTGATGGATATGCAGTCAATTGGTTATAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTATTCCTGACTTGGAGAGTTATGGCACCTTAATTCATGCAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTGAAAGTTAAATTGATGCCAAGACAAGGAACGATTACTAACGTTGTGGCCGCGTTACGAACAAACCGAGAGGTAAGGAGAGCAGTTGAGATTATTGAGCTGTTGGAGAGGGACAGTCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCGGGAAAGGTGACCATGGGGATGACAGACAGAGGGTTTATACCATATATCAAGGTCAGGCAAGAGGTTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTTGCTTCTGCTACTAGTTTTCTTGATGAACTCAAATGCTTTATATATGTAACCACCACTGCATTCCTGGTTCCCCGAGGTCACATCGTAGTCTACAAGCTCTTGTTCTGGAAGAGACATCAATTTCCCTGTTTTTATTTTGTTGATGCCTTCAACTGCTGCTACTGCAGAGAATGCCCAGCAGCTCCATGTGTTGAAAATTCAAGACTGTTTCAACAAGAAGTCTTTACTTTAGAACTCGAAAAATAA ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTTAATTTTCATCACTTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCGTCACAAACCCTTCAAGACAGCATTAAAGCTGCTGTTGAATCAAAGTCGTATAAGAAACTTCCTGATCTGTTTCCTTCATTGCAAGAAGCTTGCCACAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGACCTCGCTCAAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAAAGTCCTTCACCTTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGGTTGTGTCCCTTCCCCTCAGACTCATTTTCTACTTTCTTCTGCCTGGCTAAAACAACGTAGCCAGGCTAAGTCTGTTGCTAATATCTTGATGGATATGCAGTCAATTGGTTATAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTATTCCTGACTTGGAGAGTTATGGCACCTTAATTCATGCAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTGAAAGTTAAATTGATGCCAAGACAAGGAACGATTACTAACGTTGTGGCCGCGTTACGAACAAACCGAGAGGTAAGGAGAGCAGTTGAGATTATTGAGCTGTTGGAGAGGGACAGTCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCGGGAAAGGTGACCATGGGGATGACAGACAGAGGGTTTATACCATATATCAAGGTCAGGCAAGAGGTTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTTGCTTCTGCTACTAGTTTTCTTGATGAACTCAAATGCTTTATATATGTAACCACCACTGCATTCCTGGTTCCCCGAGGTCACATCGTAGTCTACAAGCTCTTGTTCTGGAAGAGACATCAATTTCCCTGTTTTTATTTTGTTGATGCCTTCAACTGCTGCTACTGCAGAGAATGCCCAGCAGCTCCATGTGTTGAAAATTCAAGACTGTTTCAACAAGAAGTCTTTACTTTAGAACTCGAAAAATAA MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGLAGIGEVELASATSFLDELKCFIYVTTTAFLVPRGHIVVYKLLFWKRHQFPCFYFVDAFNCCYCRECPAAPCVENSRLFQQEVFTLELEK
BLAST of CsGy2G003450 vs. NCBI nr
Match: XP_004139374.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativus] >KGN60845.1 hypothetical protein Csa_2G013260 [Cucumis sativus]) HSP 1 Score: 648.7 bits (1672), Expect = 1.4e-182 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CsGy2G003450 vs. NCBI nr
Match: XP_008455557.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo] >XP_008455565.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo]) HSP 1 Score: 614.4 bits (1583), Expect = 2.8e-172 Identity = 317/333 (95.20%), Postives = 321/333 (96.40%), Query Frame = 0
BLAST of CsGy2G003450 vs. NCBI nr
Match: XP_022140758.1 (pentatricopeptide repeat-containing protein At1g06270 [Momordica charantia]) HSP 1 Score: 527.3 bits (1357), Expect = 4.6e-146 Identity = 273/333 (81.98%), Postives = 299/333 (89.79%), Query Frame = 0
BLAST of CsGy2G003450 vs. NCBI nr
Match: XP_022971046.1 (pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022971047.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022971048.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima]) HSP 1 Score: 452.6 bits (1163), Expect = 1.4e-123 Identity = 235/333 (70.57%), Postives = 266/333 (79.88%), Query Frame = 0
BLAST of CsGy2G003450 vs. NCBI nr
Match: XP_022947166.1 (pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata] >XP_022947167.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata] >XP_022947168.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata]) HSP 1 Score: 448.7 bits (1153), Expect = 2.1e-122 Identity = 232/333 (69.67%), Postives = 266/333 (79.88%), Query Frame = 0
BLAST of CsGy2G003450 vs. TAIR10
Match: AT1G06270.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 273.9 bits (699), Expect = 1.7e-73 Identity = 148/305 (48.52%), Postives = 193/305 (63.28%), Query Frame = 0
BLAST of CsGy2G003450 vs. TAIR10
Match: AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-07 Identity = 35/123 (28.46%), Postives = 65/123 (52.85%), Query Frame = 0
BLAST of CsGy2G003450 vs. Swiss-Prot
Match: sp|Q9LNC0|PPR16_ARATH (Pentatricopeptide repeat-containing protein At1g06270 OS=Arabidopsis thaliana OX=3702 GN=At1g06270 PE=2 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 3.0e-72 Identity = 148/305 (48.52%), Postives = 193/305 (63.28%), Query Frame = 0
BLAST of CsGy2G003450 vs. Swiss-Prot
Match: sp|Q9M065|PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g36680 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.8e-06 Identity = 35/123 (28.46%), Postives = 65/123 (52.85%), Query Frame = 0
BLAST of CsGy2G003450 vs. TrEMBL
Match: tr|A0A0A0LFL3|A0A0A0LFL3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013260 PE=4 SV=1) HSP 1 Score: 648.7 bits (1672), Expect = 9.0e-183 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CsGy2G003450 vs. TrEMBL
Match: tr|A0A1S3C1B6|A0A1S3C1B6_CUCME (pentatricopeptide repeat-containing protein At1g06270 OS=Cucumis melo OX=3656 GN=LOC103495705 PE=4 SV=1) HSP 1 Score: 614.4 bits (1583), Expect = 1.9e-172 Identity = 317/333 (95.20%), Postives = 321/333 (96.40%), Query Frame = 0
BLAST of CsGy2G003450 vs. TrEMBL
Match: tr|A0A067DSI9|A0A067DSI9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g046547mg PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104 Identity = 193/332 (58.13%), Postives = 255/332 (76.81%), Query Frame = 0
BLAST of CsGy2G003450 vs. TrEMBL
Match: tr|V4UCI9|V4UCI9_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017507mg PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103 Identity = 193/332 (58.13%), Postives = 254/332 (76.51%), Query Frame = 0
BLAST of CsGy2G003450 vs. TrEMBL
Match: tr|A0A2H5QQA1|A0A2H5QQA1_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_251680 PE=4 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.4e-103 Identity = 193/332 (58.13%), Postives = 253/332 (76.20%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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