CsGy2G002260 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACAAAGCCCTAATCGGACCAAACCCTAGGGTTTACTCTAACCGGACCACTAAACCCACCTTTTTTTCTTCTCTCTCTCTCTCAATTTTCCAGAAAAACCATTCGCTTTCTCCCCATCTTCTTCTTCTTCTTCTACTTCCAGCTCCCCCTCTCTTTCTGCAACTTCCCTTTTTTCCTTTCTCTTCGTTTTCTCTTCACTTCACTTTCTTTTTCCGCTGTCATGGAGTTGGACAAAGTGGGTTACTCCCTGGACGACACTTCTCTTTGGTTTCCTTCTGTTTTGGAAGCTTTGACGGTGGAGGCTCTTCTCACTGCTGCTAACTCTCTTGCTTGGTTTTTAACCACGGTGAGTTCTTTATTTTCATTTTTTTATCAGATGGGCTTTGTTTCTTTTGGTTTCTGCTGCTTCTTTTTCATGATTTTTGCTTCTTCAACCTCTAATTTAGTGGTTCTTTGCATTTTTTTGTGTTAACTTTCTTCATTTCTTCTCTATTCCTTTACTGGGTTTTTGCAGTTTACTAGCTTTTTTGGCTTTTGTTGTGGTTACTTTTCTTTCTTACCCTATTTTTTAGTTGTGATGTGGAGTTTTAGCTGCAAATGTTGAGTATTGACTTGTTGGTGGAGGCTAAGAGAACTGCTTGTTGTAGTCTCTAGTGGTTAGTTTGGATGGGAGGCTATGTTTTTAACTTCATTTCATATTTTGACAATGAAGAAAGGATTTATATTGTACTCCAAATTCCTTGTGAACATTGGGGAAATCCCGCTTATTGAGGAATAAGATGTTAGAAATGAGGATTTGAGATTTGGAGGCTATATTTGTAAGGTACATGTTGGTGGATTGAGTATAGACTTCGCCTTTACTGTTGTCTGGAGTGGTCAATGTTGCTTCTAATTCTTTAGACTTTGGTGTAATTTGGCATCTTTGAAATGTCCATTTTATTATCTGAATTTGAGCTTAGTGCAGTCATATTAAATACTTATCCGTTTCTTGTGACTTTGGTTTGTCAAGGTTTAGCTATCCTCGGTGCTTTTGGTTGTAAGTGTATTCTCCTGTGTGTTAGAATTTATTGTCTGATCATTGTAGACTATGCTTTCTGATTGCTTTCGGGAAATTCCCTTTTCTGTTCTTGTAATTAACAGAATTAAAATCAAGTCATGTTGGGATTTCTTGAGATTTTCCTTTCCTAACATATCATTTGAATCAACCTGTTAGTGGAAGGGGGATCGGCAAATTTCACTCAATTTCCATATCTGTTTCTTTTAATCTCGTCTTAAAAGACTTTTTCCAATCCTGATTGTACTTCTCGATAAGCCGTGGTTGTACTTTTATAACAGTATAATTCAGTGTGCAGTTCCCTGATCTTATTGAAGTAATAGTGTGATGTTAATTGGATGCAATGAACAAGATTTTTAAATCTCAATTCATTTTCCAACATAATTTAAGTTTTCTTCAGGCAGGAGCTCTGTTAAATGATGTCAATGCTCCACCAGGATTCACTGCAATTGGGAAAAAGTAATTAAAAGTTTCGTTTTTTTTGTGTCTTTGACTTTCTACTCAATTGGTTCCGAGATTACTGATTTGTTTGTACTTCTGCCTGGCTCAGCTTTCCTTTTGAAGAACTTCATGCAAAGAATAATCCAGATCGAGAAAATGTAGATGGCAGTGAAACAGAGGATGATAAAGATGGGGATGAAGTTGATGATGATGATGCAAATGACCAGGATGGAGGGGAAGATGTTGAAGATTTCTCAGCCGAAGAAGGTGATGACGGAGATCTAGAAGATGACCCTGAAGCAAGTGGCAATGGAAGGGCCGGAGGAGATGAGGAGGATGATGGAGAAGATGACGATGACGATGCAAATGATCCAGATGAAGATGACGACGACGATGATGATGAAGATTTCTCCGCTGAAGAAGGGGATGAGGGTGATCAAGAGGATGACCCTGAAGCAAGTGGTAATGGAAGAATTGAAGGTGTTGAGGAGGAAGACGATGACGACGACGACGACGATGGAGATGAGGACGACGACGATGACGATGAAGAGGATGAAGATGACGAGGACGAAGATGATGACGAGGAAACACTCGAACCACCAGCTAAGAGAAGAAAGTGAAAATGTTGATTGCTTCTTTCCTTTTTCTGTTATCAGTGTTTCACTTCCCCTTTGTGTCTGGAGTTTGAAGTAACTAGTGAGGGGAACTTAGCCAGTCAGCCTTGGCATTTAGGGGTAGCAAGATTGTTGACCTTGTTATTAATGAACTTCCTAAAATTTATGTTGTGGATCCACATTATATATCACAATTTATTTTGCTAAAATGCACAAGGTTTTCTTCTACAATTTATTGGTTGGGACGGTTGGTTTCACCTGGTTGTTTGACAACTAACACTTCAACTCAGGACACCATAGGAGTTTTTCAATTTGAATGAATTGATTCAAATGACTAAATAAGAAAAAAATGTTGAATATCGGCAAGAGCCAG AAACAAAGCCCTAATCGGACCAAACCCTAGGGTTTACTCTAACCGGACCACTAAACCCACCTTTTTTTCTTCTCTCTCTCTCTCAATTTTCCAGAAAAACCATTCGCTTTCTCCCCATCTTCTTCTTCTTCTTCTACTTCCAGCTCCCCCTCTCTTTCTGCAACTTCCCTTTTTTCCTTTCTCTTCGTTTTCTCTTCACTTCACTTTCTTTTTCCGCTGTCATGGAGTTGGACAAAGTGGGTTACTCCCTGGACGACACTTCTCTTTGGTTTCCTTCTGTTTTGGAAGCTTTGACGGTGGAGGCTCTTCTCACTGCTGCTAACTCTCTTGCTTGGTTTTTAACCACGGCAGGAGCTCTGTTAAATGATGTCAATGCTCCACCAGGATTCACTGCAATTGGGAAAAACTTTCCTTTTGAAGAACTTCATGCAAAGAATAATCCAGATCGAGAAAATGTAGATGGCAGTGAAACAGAGGATGATAAAGATGGGGATGAAGTTGATGATGATGATGCAAATGACCAGGATGGAGGGGAAGATGTTGAAGATTTCTCAGCCGAAGAAGGTGATGACGGAGATCTAGAAGATGACCCTGAAGCAAGTGGCAATGGAAGGGCCGGAGGAGATGAGGAGGATGATGGAGAAGATGACGATGACGATGCAAATGATCCAGATGAAGATGACGACGACGATGATGATGAAGATTTCTCCGCTGAAGAAGGGGATGAGGGTGATCAAGAGGATGACCCTGAAGCAAGTGGTAATGGAAGAATTGAAGGTGTTGAGGAGGAAGACGATGACGACGACGACGACGATGGAGATGAGGACGACGACGATGACGATGAAGAGGATGAAGATGACGAGGACGAAGATGATGACGAGGAAACACTCGAACCACCAGCTAAGAGAAGAAAGTGAAAATGTTGATTGCTTCTTTCCTTTTTCTGTTATCAGTGTTTCACTTCCCCTTTGTGTCTGGAGTTTGAAGTAACTAGTGAGGGGAACTTAGCCAGTCAGCCTTGGCATTTAGGGGTAGCAAGATTGTTGACCTTGTTATTAATGAACTTCCTAAAATTTATGTTGTGGATCCACATTATATATCACAATTTATTTTGCTAAAATGCACAAGGTTTTCTTCTACAATTTATTGGTTGGGACGGTTGGTTTCACCTGGTTGTTTGACAACTAACACTTCAACTCAGGACACCATAGGAGTTTTTCAATTTGAATGAATTGATTCAAATGACTAAATAAGAAAAAAATGTTGAATATCGGCAAGAGCCAG ATGGAGTTGGACAAAGTGGGTTACTCCCTGGACGACACTTCTCTTTGGTTTCCTTCTGTTTTGGAAGCTTTGACGGTGGAGGCTCTTCTCACTGCTGCTAACTCTCTTGCTTGGTTTTTAACCACGGCAGGAGCTCTGTTAAATGATGTCAATGCTCCACCAGGATTCACTGCAATTGGGAAAAACTTTCCTTTTGAAGAACTTCATGCAAAGAATAATCCAGATCGAGAAAATGTAGATGGCAGTGAAACAGAGGATGATAAAGATGGGGATGAAGTTGATGATGATGATGCAAATGACCAGGATGGAGGGGAAGATGTTGAAGATTTCTCAGCCGAAGAAGGTGATGACGGAGATCTAGAAGATGACCCTGAAGCAAGTGGCAATGGAAGGGCCGGAGGAGATGAGGAGGATGATGGAGAAGATGACGATGACGATGCAAATGATCCAGATGAAGATGACGACGACGATGATGATGAAGATTTCTCCGCTGAAGAAGGGGATGAGGGTGATCAAGAGGATGACCCTGAAGCAAGTGGTAATGGAAGAATTGAAGGTGTTGAGGAGGAAGACGATGACGACGACGACGACGATGGAGATGAGGACGACGACGATGACGATGAAGAGGATGAAGATGACGAGGACGAAGATGATGACGAGGAAACACTCGAACCACCAGCTAAGAGAAGAAAGTGA MELDKVGYSLDDTSLWFPSVLEALTVEALLTAANSLAWFLTTAGALLNDVNAPPGFTAIGKNFPFEELHAKNNPDRENVDGSETEDDKDGDEVDDDDANDQDGGEDVEDFSAEEGDDGDLEDDPEASGNGRAGGDEEDDGEDDDDDANDPDEDDDDDDDEDFSAEEGDEGDQEDDPEASGNGRIEGVEEEDDDDDDDDGDEDDDDDDEEDEDDEDEDDDEETLEPPAKRRK
BLAST of CsGy2G002260 vs. NCBI nr
Match: XP_004139283.1 (PREDICTED: prostatic spermine-binding protein [Cucumis sativus] >KGN60727.1 hypothetical protein Csa_2G008670 [Cucumis sativus]) HSP 1 Score: 171.8 bits (434), Expect = 2.7e-39 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CsGy2G002260 vs. NCBI nr
Match: XP_008457280.1 (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo]) HSP 1 Score: 167.2 bits (422), Expect = 6.8e-38 Identity = 81/84 (96.43%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of CsGy2G002260 vs. NCBI nr
Match: XP_022999302.1 (nucleolin-like [Cucurbita maxima]) HSP 1 Score: 145.6 bits (366), Expect = 2.1e-31 Identity = 70/81 (86.42%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of CsGy2G002260 vs. NCBI nr
Match: XP_023547167.1 (nucleolin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 144.4 bits (363), Expect = 4.7e-31 Identity = 69/81 (85.19%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of CsGy2G002260 vs. NCBI nr
Match: XP_022946157.1 (nucleolin-like [Cucurbita moschata]) HSP 1 Score: 141.4 bits (355), Expect = 4.0e-30 Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of CsGy2G002260 vs. TrEMBL
Match: tr|A0A0A0LJ21|A0A0A0LJ21_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008670 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.8e-39 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CsGy2G002260 vs. TrEMBL
Match: tr|A0A1S3C4Q0|A0A1S3C4Q0_CUCME (prostatic spermine-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103497007 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 4.5e-38 Identity = 81/84 (96.43%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of CsGy2G002260 vs. TrEMBL
Match: tr|A0A1S3C539|A0A1S3C539_CUCME (phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo OX=3656 GN=LOC103496993 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.7e-10 Identity = 40/76 (52.63%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of CsGy2G002260 vs. TrEMBL
Match: tr|A0A2P4K8J9|A0A2P4K8J9_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_01712 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.7e-10 Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 0
BLAST of CsGy2G002260 vs. TrEMBL
Match: tr|W9SIV3|W9SIV3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015554 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.3e-08 Identity = 41/77 (53.25%), Postives = 47/77 (61.04%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|