CsGy2G000970.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGATTTCAGGTGGAGTAACGTCCATGGACGACTTCTGAAGCAGTTCTTCCAAAAGTCTACAACCGGAAACAACTTCATATCAAGAAACAGATTACTGCAAATACGACGATCAAATCCTCACTCTCTTCACTTCCTCTCTCTACTTCGCCGGTCTCCTCTCCACCTTCTTCGCTTCTCACGTCACCAGAAACTATGGCCGTCGAGCAAGCATTCTCGTTGGATCAGTCTCCTTCTTCCTCGGCGGCTTAATCAACGCCGTCGCAATCAACATCCCTATGCTCATCATCGGCCGATCCTCCTCGGAATCGGTATCGGATTCGGCAACCAAGCCGTTCCATTATACCTTTCCGAAATTGCTCCGGCCAAAATCCGCGGCCGAGTCAACCAATTGTTCCAATTGACGACTTGCTTAGGGATTCTGATCGCCAATTTCATCAATTACGGAACAGAGAAGATTCATCCATGGGGATGGCGATTATCTTTAGGGTTAGCGACGTTTCCAGCGGCGATGATGTTCATCGGCGGATTATTTCTTCCTGAAACGCCGAATAGTTTAGTGGAACAGGGGAAATTAGAGGAAGCGCGAAGAGTTCTTGAGAAGATTCGAGGTACGACGAATATCGAAGCGGAATTCGCGGATCTTGTTGATGCGAGCAATCAAGCTAGGGCTGTGAAGAATCCGTTTAGGATTTGTTGCGGCGGAAGAATCGACCGCAATTGGTCATCGGAGCGATTGGGATTCCGGCGTTTCAGCAGCTTACAGGGAATAACTCGATTCTATTTTATGCTCCGGTGA ATGGCGGATTTCAGGTGGAGTAACGTCCATGGACGACTTCTGAAGCAGTTCTTCCAAAAGTCTACAACCGGAAACAACTTCATATCAAGAAACAGATTACTGCAAATACGACGATCAAATCCTCACTCTCTTCACTTCCTCTCTCTACTTCGCCGGTCTCCTCTCCACCTTCTTCGCTTCTCACGTCACCAGAAACTATGGCCGTCGAGCAAGCATTCTCGTTGGATCAGTCTCCTTCTTCCTCGGCGGCTTAATCAACGCCGTCGCAATCAACATCCCTATGCTCATCATCGGCCGATCCTCCTCGGAATCGGTATCGGATTCGGCAACCAAGCCGTTCCATTATACCTTTCCGAAATTGCTCCGGCCAAAATCCGCGGCCGAGTCAACCAATTGTTCCAATTGACGACTTGCTTAGGGATTCTGATCGCCAATTTCATCAATTACGGAACAGAGAAGATTCATCCATGGGGATGGCGATTATCTTTAGGGTTAGCGACGTTTCCAGCGGCGATGATGTTCATCGGCGGATTATTTCTTCCTGAAACGCCGAATAGTTTAGTGGAACAGGGGAAATTAGAGGAAGCGCGAAGAGTTCTTGAGAAGATTCGAGGTACGACGAATATCGAAGCGGAATTCGCGGATCTTGTTGATGCGAGCAATCAAGCTAGGGCTGTGAAGAATCCGTTTAGGATTTGTTGCGGCGGAAGAATCGACCGCAATTGGTCATCGGAGCGATTGGGATTCCGGCGTTTCAGCAGCTTACAGGGAATAACTCGATTCTATTTTATGCTCCGGTGA ATGGCGGATTTCAGGTGGAGTAACGTCCATGGACGACTTCTGAAGCAGTTCTTCCAAAAGTCTACAACCGGAAACAACTTCATATCAAGAAACAGATTACTGCAAATACGACGATCAAATCCTCACTCTCTTCACTTCCTCTCTCTACTTCGCCGGTCTCCTCTCCACCTTCTTCGCTTCTCACGTCACCAGAAACTATGGCCGTCGAGCAAGCATTCTCGTTGGATCAGTCTCCTTCTTCCTCGGCGGCTTAATCAACGCCGTCGCAATCAACATCCCTATGCTCATCATCGGCCGATCCTCCTCGGAATCGGTATCGGATTCGGCAACCAAGCCGTTCCATTATACCTTTCCGAAATTGCTCCGGCCAAAATCCGCGGCCGAGTCAACCAATTGTTCCAATTGACGACTTGCTTAGGGATTCTGATCGCCAATTTCATCAATTACGGAACAGAGAAGATTCATCCATGGGGATGGCGATTATCTTTAGGGTTAGCGACGTTTCCAGCGGCGATGATGTTCATCGGCGGATTATTTCTTCCTGAAACGCCGAATAGTTTAGTGGAACAGGGGAAATTAGAGGAAGCGCGAAGAGTTCTTGAGAAGATTCGAGGTACGACGAATATCGAAGCGGAATTCGCGGATCTTGTTGATGCGAGCAATCAAGCTAGGGCTGTGAAGAATCCGTTTAGGATTTGTTGCGGCGGAAGAATCGACCGCAATTGGTCATCGGAGCGATTGGGATTCCGGCGTTTCAGCAGCTTACAGGGAATAACTCGATTCTATTTTATGCTCCGGTGA MADFRWSNVHGRLLKQFFQKSTTGNNFISRNRLLQIRRSNPHSLHFLSLLRRSPLHLLRFSRHQKLWPSSKHSRWISLLLPRRLNQRRRNQHPYAHHRPILLGIGIGFGNQAVPLYLSEIAPAKIRGRVNQLFQLTTCLGILIANFINYGTEKIHPWGWRLSLGLATFPAAMMFIGGLFLPETPNSLVEQGKLEEARRVLEKIRGTTNIEAEFADLVDASNQARAVKNPFRICCGGRIDRNWSSERLGFRRFSSLQGITRFYFMLR
BLAST of CsGy2G000970.1 vs. NCBI nr
Match: NP_001292711.1 (sugar transport protein 14 [Cucumis sativus] >XP_004139351.1 PREDICTED: sugar transport protein 14 isoform X1 [Cucumis sativus] >KGN60596.1 hypothetical protein Csa_2G002510 [Cucumis sativus] >AJP77613.1 hexose transporter 4 [Cucumis sativus]) HSP 1 Score: 268.9 bits (686), Expect = 1.9e-68 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. NCBI nr
Match: XP_011648644.1 (PREDICTED: sugar transport protein 14 isoform X2 [Cucumis sativus]) HSP 1 Score: 268.9 bits (686), Expect = 1.9e-68 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. NCBI nr
Match: XP_011648645.1 (PREDICTED: sugar transport protein 14 isoform X3 [Cucumis sativus]) HSP 1 Score: 268.9 bits (686), Expect = 1.9e-68 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. NCBI nr
Match: XP_008458607.1 (PREDICTED: sugar transport protein 14-like isoform X2 [Cucumis melo]) HSP 1 Score: 258.5 bits (659), Expect = 2.6e-65 Identity = 127/132 (96.21%), Postives = 129/132 (97.73%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. NCBI nr
Match: XP_008458616.2 (PREDICTED: sugar transport protein 14-like isoform X1 [Cucumis melo]) HSP 1 Score: 258.5 bits (659), Expect = 2.6e-65 Identity = 127/132 (96.21%), Postives = 129/132 (97.73%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. TAIR10
Match: AT1G77210.1 (sugar transporter 14) HSP 1 Score: 230.7 bits (587), Expect = 1.0e-60 Identity = 115/164 (70.12%), Postives = 128/164 (78.05%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. TAIR10
Match: AT4G02050.1 (sugar transporter protein 7) HSP 1 Score: 192.6 bits (488), Expect = 3.1e-49 Identity = 86/132 (65.15%), Postives = 106/132 (80.30%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. TAIR10
Match: AT5G26340.1 (Major facilitator superfamily protein) HSP 1 Score: 175.6 bits (444), Expect = 4.0e-44 Identity = 84/133 (63.16%), Postives = 104/133 (78.20%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. TAIR10
Match: AT3G19940.1 (Major facilitator superfamily protein) HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41 Identity = 75/132 (56.82%), Postives = 103/132 (78.03%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. TAIR10
Match: AT1G50310.1 (sugar transporter 9) HSP 1 Score: 164.5 bits (415), Expect = 9.1e-41 Identity = 75/132 (56.82%), Postives = 100/132 (75.76%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. Swiss-Prot
Match: sp|Q8GW61|STP14_ARATH (Sugar transport protein 14 OS=Arabidopsis thaliana OX=3702 GN=STP14 PE=2 SV=2) HSP 1 Score: 230.7 bits (587), Expect = 1.9e-59 Identity = 115/164 (70.12%), Postives = 128/164 (78.05%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. Swiss-Prot
Match: sp|O04249|STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana OX=3702 GN=STP7 PE=1 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 5.7e-48 Identity = 86/132 (65.15%), Postives = 106/132 (80.30%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. Swiss-Prot
Match: sp|Q10710|STA_RICCO (Sugar carrier protein A OS=Ricinus communis OX=3988 GN=STA PE=2 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 3.1e-46 Identity = 86/132 (65.15%), Postives = 105/132 (79.55%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. Swiss-Prot
Match: sp|Q10PW9|MST4_ORYSJ (Sugar transport protein MST4 OS=Oryza sativa subsp. japonica OX=39947 GN=MST4 PE=1 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 9.0e-46 Identity = 85/132 (64.39%), Postives = 106/132 (80.30%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. Swiss-Prot
Match: sp|Q94AZ2|STP13_ARATH (Sugar transport protein 13 OS=Arabidopsis thaliana OX=3702 GN=STP13 PE=1 SV=2) HSP 1 Score: 175.6 bits (444), Expect = 7.2e-43 Identity = 84/133 (63.16%), Postives = 104/133 (78.20%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. TrEMBL
Match: tr|A0A0A0LKS4|A0A0A0LKS4_CUCSA (Hexose transporter 4 OS=Cucumis sativus OX=3659 GN=HT4 PE=2 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.3e-68 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. TrEMBL
Match: tr|A0A1S3C8D2|A0A1S3C8D2_CUCME (sugar transport protein 14-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497958 PE=3 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65 Identity = 127/132 (96.21%), Postives = 129/132 (97.73%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. TrEMBL
Match: tr|A0A1S3C9G8|A0A1S3C9G8_CUCME (sugar transport protein 14-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497958 PE=3 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65 Identity = 127/132 (96.21%), Postives = 129/132 (97.73%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. TrEMBL
Match: tr|A0A2I4EW40|A0A2I4EW40_9ROSI (sugar transport protein 14-like OS=Juglans regia OX=51240 GN=LOC108993232 PE=3 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.7e-63 Identity = 124/164 (75.61%), Postives = 134/164 (81.71%), Query Frame = 0
BLAST of CsGy2G000970.1 vs. TrEMBL
Match: tr|A0A2N9G1W8|A0A2N9G1W8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24659 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62 Identity = 123/164 (75.00%), Postives = 134/164 (81.71%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
|