CsGy1G030580 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATGAATGGCATAACATGTGGGAAAGGGTGCTCTACTACCCCTCTAACCACTTTTACAAGTTCCTTAGTATTGATCTTATGTACATACTCTACTTAATTATTTCTTAATTTTTCAAAATTGGCAAGTGAAAAGTCACAGCTCCATGTCTTTGTGGGCATTAGCACACCTGAGTTATTCCCAACAATAAATACTAATAAAAAAAATAGGTTTTTTCAAATATAACAAAATAAATCAAAATATTTACAAATATAGCAAAATATCAAGGTTTATGGGTGAACAGACTTATATAATAGTTTATAGCGGTCTATCATAGATAAAATGTATGATATTTTGGGAACAACTTTTGAGAGAAATGAGAAAGAAGAAAGTTTGAGGAAAAAAAAAAGAAGAACAAAGAATGGACACCTTTAAGGGTAGTTTAAAACCAACATGCTCATCTTTGATGTCAGTTTAAAACCGACATTAAAGATTATGTTTTTTAAAACAATCATTGTACATACGTGTTTAGTTTTCTCTATCCAACATTTCATAAGCCAAAATTTCTTGTGATCAACTAGGACTATGAACCTTGGGTTGGTGACAAGCGATTGGGCTAGACCGAGTCTACTAACACTAACCATACTAAATTAGTCGTCAATCGATATTTGGTCTCTTAGTTCAAATCGCTTATTGTCAATCCTCAAACCCTCAAATCCAATTGTTAGTCACATCGTCCTCTATCATCAAATGTCAATTGTTAGTCTTAATTTTCAGGTCAAGGTCTCCAATCACAGCTAGCAGCCATTATTGGTCAACTTCAAAGATCTAGACTCCCCAAATGAGAGAGAAACTTAGAAGAAAAAACACGTTCTCTCTTTACGAAGTTCGAAAGTGGAGAACGCATAACATTCTCTGAGCACATAGGATGAAAGGTAAAGCTACCATTTCTTGAAGGAGTTTTAGGTGGCAAGAGACTTTAGGGCCTGTTGGAGGTGTTGATCATAAGGAACTGAAAGCAAAGAGGGATGAAGGTAGTTTACTTGCCAAGCTGATAGGCGAAGGATGGAATGTATAAAGTCAATCATGCATATGCCTTGTGACATGTTGGTCCTAAGCAATGTCTTGCGTGAAGGGACCCACCTAGAAAAGCTTGCCTCTAAGTTAGGAGAGCACTAAAATGGGACTCTGATGTGAATATCTAATTAATCACGCCACTAAGATGTCAAAAGGATTTCTAGGCATTGATGAATGGTCGACCACCTTTGACGTGAGAAGAGTAACATGCCTGAAGCATAACTGGTTGAACCAATATGAATGAGTGTTATCTTCGTGACCCAAACACGATTGGTGTTGACCACACTAGGTGCTATTGTGGTAGCAAGAGAGGCTAGATGATGACAATTGAGAGGTTCTCACTGAGCATTCCTAGTTGCACGGGAAGAGAGGTCAAATGGCAAGGTGATACACTTGTTTGGCTCATCATAGAATATAGCACACATCAAAACTAAGATTTGATTTGGAAACAAGGGCACAAAAAGCTTCGACAGAAAGGAAAGGCCTACCAGGTCGTATGCCCATGGGTGCAAAATTCTTCCTAAAAGTGCGAGCTGACTCAAAGACCTGGGACTTTGACCTTAGAAAGGAATGA ATGGAAATGAATGGCATAACATGTGGGAAAGGGTGGCAAGAGACTTTAGGGCCTGTTGGAGGTGTTGATCATAAGGAACTGAAAGCAAAGAGGGATGAAGGTAGTTTACTTGCCAAGCTGATAGGCGAAGGATGGAATCACACATCAAAACTAAGATTTGATTTGGAAACAAGGGCACAAAAAGCTTCGACAGAAAGGAAAGGCCTACCAGGTCGTATGCCCATGGGTGCAAAATTCTTCCTAAAAGTGCGAGCTGACTCAAAGACCTGGGACTTTGACCTTAGAAAGGAATGA ATGGAAATGAATGGCATAACATGTGGGAAAGGGTGGCAAGAGACTTTAGGGCCTGTTGGAGGTGTTGATCATAAGGAACTGAAAGCAAAGAGGGATGAAGGTAGTTTACTTGCCAAGCTGATAGGCGAAGGATGGAATCACACATCAAAACTAAGATTTGATTTGGAAACAAGGGCACAAAAAGCTTCGACAGAAAGGAAAGGCCTACCAGGTCGTATGCCCATGGGTGCAAAATTCTTCCTAAAAGTGCGAGCTGACTCAAAGACCTGGGACTTTGACCTTAGAAAGGAATGA MEMNGITCGKGWQETLGPVGGVDHKELKAKRDEGSLLAKLIGEGWNHTSKLRFDLETRAQKASTERKGLPGRMPMGAKFFLKVRADSKTWDFDLRKE
BLAST of CsGy1G030580 vs. NCBI nr
Match: XP_025884631.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC101261309, partial [Solanum lycopersicum]) HSP 1 Score: 74.3 bits (181), Expect = 2.5e-10 Identity = 48/109 (44.04%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of CsGy1G030580 vs. NCBI nr
Match: OVA06704.1 (Ribosomal protein L2 [Macleaya cordata]) HSP 1 Score: 73.9 bits (180), Expect = 3.3e-10 Identity = 47/127 (37.01%), Postives = 57/127 (44.88%), Query Frame = 0
BLAST of CsGy1G030580 vs. NCBI nr
Match: PHU04911.1 (60S ribosomal protein L2, mitochondrial [Capsicum chinense]) HSP 1 Score: 73.9 bits (180), Expect = 3.3e-10 Identity = 44/87 (50.57%), Postives = 55/87 (63.22%), Query Frame = 0
BLAST of CsGy1G030580 vs. NCBI nr
Match: XP_023521202.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111784913 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09 Identity = 47/113 (41.59%), Postives = 54/113 (47.79%), Query Frame = 0
BLAST of CsGy1G030580 vs. NCBI nr
Match: NP_178797.2 (Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana] >AEC06100.1 Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]) HSP 1 Score: 70.1 bits (170), Expect = 4.7e-09 Identity = 49/123 (39.84%), Postives = 57/123 (46.34%), Query Frame = 0
BLAST of CsGy1G030580 vs. TAIR10
Match: AT2G07715.1 (Nucleic acid-binding, OB-fold-like protein) HSP 1 Score: 70.1 bits (170), Expect = 8.6e-13 Identity = 49/123 (39.84%), Postives = 57/123 (46.34%), Query Frame = 0
BLAST of CsGy1G030580 vs. TrEMBL
Match: tr|A0A2G3BEJ0|A0A2G3BEJ0_CAPCH (60S ribosomal protein L2, mitochondrial OS=Capsicum chinense OX=80379 GN=BC332_25733 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.2e-10 Identity = 44/87 (50.57%), Postives = 55/87 (63.22%), Query Frame = 0
BLAST of CsGy1G030580 vs. TrEMBL
Match: tr|A0A200Q8E8|A0A200Q8E8_9MAGN (Ribosomal protein L2 OS=Macleaya cordata OX=56857 GN=BVC80_6573g1 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.2e-10 Identity = 47/127 (37.01%), Postives = 57/127 (44.88%), Query Frame = 0
BLAST of CsGy1G030580 vs. TrEMBL
Match: tr|F4IMC7|F4IMC7_ARATH (Nucleic acid-binding, OB-fold-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g07715 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.1e-09 Identity = 49/123 (39.84%), Postives = 57/123 (46.34%), Query Frame = 0
BLAST of CsGy1G030580 vs. TrEMBL
Match: tr|A0A2G3C9U9|A0A2G3C9U9_CAPCH (60S ribosomal protein L2, mitochondrial OS=Capsicum chinense OX=80379 GN=BC332_16734 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 5.3e-09 Identity = 41/83 (49.40%), Postives = 48/83 (57.83%), Query Frame = 0
BLAST of CsGy1G030580 vs. TrEMBL
Match: tr|A0A078K1A3|A0A078K1A3_BRANA (BnaUnng04520D protein (Fragment) OS=Brassica napus OX=3708 GN=BnaUnng04520D PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.0e-08 Identity = 48/123 (39.02%), Postives = 55/123 (44.72%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |