CsGy1G017050.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCCTTCCAAAATTTATTCCCTCTTCCTCATTTGCATGCTTTTCATTTCCTCAGCCTCTCCCATCCTCGGCTGCGGTTCATGCAGCGGCAAACCCCCTAGAAAAACCAAGCCCGGTTCCGGTTCAAAGTCCCCCAAAGGCCCCATCACCCTTCCCCCCATCCCCATCAAGATCCCTCCCGTGGTTCCAATCCCTTCCGTCCCCATTCCTCCGGTGGTTCCAATCCCCTCGGTCCCCATTCCTCCGGTGGTTCCAATCCCCTCGGTCCCCATTCCTCCGGTGGTTCCTATCCCATCTGTTCCCATTCCACCAGTACTCCCAGTCCCTCCGATTCTTGGAAAGCCGTCGCCAGGGGTGAACACACCGTGCCCACCCTCGGGGAAAGAGACTTGTCCGATTGACACGTTGAAGTTGGGAGGGTGTGTGAATCTATTGGGAGGGTTGGTGCACATTGGAATAGGGGACCCTGCAGCGAATGCATGTTGCCCTATAATATCAGGGTTGGCTGAATTGGAAGCAGCTGTTTGTCTTTGTACAACACTTAAGATTAAGGCTCTTGACCTTAATATCTATGTTCCTATTGCTCTTCAGCTCCTTATCACTTGTGGAAAAACCCCTCCTCCTGGCTACACTTGCTCCCTTTAGACAACAACAAAGAAAAAACAACAACAACAAAAAGGTTAATCATCTTCATCTTTCTCTTAAATCTTATTCTTAATCTCTCTGATTATTATCATCATTTTATAATATGTGATATATAGTGGGGGATTGAACTTCTCATTAACCTCCAACTTGATACTACTAATTAACCGTACTCAACAGTGTGACACATTCTTGTAGCTAAGATTTTAAGACATTTATAAATGAAACTTCAAGGGGTACATCTCACCAAAGTATTCAACGATAGGTTGTTATGTTCACGGATTTGAAATAATTTTGGAAATAATTATTGACTTGAAGGGCCTTTTTTTCTTCTTCTTATTTTTTTTAATCTTTTACAGGGTTGATTGATGTGGTATGGAAATGGAGTCGACATGAGAGGATGTCGAGTCAAATCTTTGTCTCTATTTTTATTTTTCGATTTATTTTATTTTTATTGTATGGAATTGCTGATGTTGTAAACCAACTTATTTTTAAAATTGTGATAGTTATTGTTGTTTAATGTTGTGTTGTGGATTATTAGGCAAGAAAAGCAAAATCTCAGTTGCCTTTGTGTTTCCTTATTTATATGTCTATCTCCTTCACCTCACTCATTTTAATCTTAG ATGGAGCCTTCCAAAATTTATTCCCTCTTCCTCATTTGCATGCTTTTCATTTCCTCAGCCTCTCCCATCCTCGGCTGCGGTTCATGCAGCGGCAAACCCCCTAGAAAAACCAAGCCCGGTTCCGGTTCAAAGTCCCCCAAAGGCCCCATCACCCTTCCCCCCATCCCCATCAAGATCCCTCCCGTGGTTCCAATCCCTTCCGTCCCCATTCCTCCGGTGGTTCCAATCCCCTCGGTCCCCATTCCTCCGGTGGTTCCAATCCCCTCGGTCCCCATTCCTCCGGTGGTTCCTATCCCATCTGTTCCCATTCCACCAGTACTCCCAGTCCCTCCGATTCTTGGAAAGCCGTCGCCAGGGGTGAACACACCGTGCCCACCCTCGGGGAAAGAGACTTGTCCGATTGACACGTTGAAGTTGGGAGGGTGTGTGAATCTATTGGGAGGGTTGGTGCACATTGGAATAGGGGACCCTGCAGCGAATGCATGTTGCCCTATAATATCAGGGTTGGCTGAATTGGAAGCAGCTGTTTGTCTTTGTACAACACTTAAGATTAAGGCTCTTGACCTTAATATCTATGTTCCTATTGCTCTTCAGCTCCTTATCACTTGGTTGATTGATGTGGTATGGAAATGGAGTCGACATGAGAGGATGTCGAGTCAAATCTTTGTCTCTATTTTTATTTTTCGATTTATTTTATTTTTATTGTATGGAATTGCTGATGTTGTAAACCAACTTATTTTTAAAATTGTGATAGTTATTGTTGTTTAATGTTGTGTTGTGGATTATTAGGCAAGAAAAGCAAAATCTCAGTTGCCTTTGTGTTTCCTTATTTATATGTCTATCTCCTTCACCTCACTCATTTTAATCTTAG ATGGAGCCTTCCAAAATTTATTCCCTCTTCCTCATTTGCATGCTTTTCATTTCCTCAGCCTCTCCCATCCTCGGCTGCGGTTCATGCAGCGGCAAACCCCCTAGAAAAACCAAGCCCGGTTCCGGTTCAAAGTCCCCCAAAGGCCCCATCACCCTTCCCCCCATCCCCATCAAGATCCCTCCCGTGGTTCCAATCCCTTCCGTCCCCATTCCTCCGGTGGTTCCAATCCCCTCGGTCCCCATTCCTCCGGTGGTTCCAATCCCCTCGGTCCCCATTCCTCCGGTGGTTCCTATCCCATCTGTTCCCATTCCACCAGTACTCCCAGTCCCTCCGATTCTTGGAAAGCCGTCGCCAGGGGTGAACACACCGTGCCCACCCTCGGGGAAAGAGACTTGTCCGATTGACACGTTGAAGTTGGGAGGGTGTGTGAATCTATTGGGAGGGTTGGTGCACATTGGAATAGGGGACCCTGCAGCGAATGCATGTTGCCCTATAATATCAGGGTTGGCTGAATTGGAAGCAGCTGTTTGTCTTTGTACAACACTTAAGATTAAGGCTCTTGACCTTAATATCTATGTTCCTATTGCTCTTCAGCTCCTTATCACTTGGTTGATTGATGTGGTATGGAAATGGAGTCGACATGAGAGGATGTCGAGTCAAATCTTTGTCTCTATTTTTATTTTTCGATTTATTTTATTTTTATTGTATGGAATTGCTGATGTTGTAAACCAACTTATTTTTAAAATTGTGATAGTTATTGTTGTTTAA MEPSKIYSLFLICMLFISSASPILGCGSCSGKPPRKTKPGSGSKSPKGPITLPPIPIKIPPVVPIPSVPIPPVVPIPSVPIPPVVPIPSVPIPPVVPIPSVPIPPVLPVPPILGKPSPGVNTPCPPSGKETCPIDTLKLGGCVNLLGGLVHIGIGDPAANACCPIISGLAELEAAVCLCTTLKIKALDLNIYVPIALQLLITWLIDVVWKWSRHERMSSQIFVSIFIFRFILFLLYGIADVVNQLIFKIVIVIVV
BLAST of CsGy1G017050.1 vs. NCBI nr
Match: AAL35979.1 (extensin-like protein, partial [Cucumis sativus]) HSP 1 Score: 273.9 bits (699), Expect = 5.7e-70 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. NCBI nr
Match: XP_004150208.2 (PREDICTED: 36.4 kDa proline-rich protein [Cucumis sativus] >KGN65120.1 hypothetical protein Csa_1G228960 [Cucumis sativus]) HSP 1 Score: 269.6 bits (688), Expect = 1.1e-68 Identity = 191/202 (94.55%), Postives = 191/202 (94.55%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. NCBI nr
Match: XP_008443949.1 (PREDICTED: 36.4 kDa proline-rich protein [Cucumis melo]) HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65 Identity = 194/202 (96.04%), Postives = 196/202 (97.03%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. NCBI nr
Match: XP_022144829.1 (36.4 kDa proline-rich protein [Momordica charantia]) HSP 1 Score: 206.8 bits (525), Expect = 8.5e-50 Identity = 167/202 (82.67%), Postives = 184/202 (91.09%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. NCBI nr
Match: XP_023529211.1 (36.4 kDa proline-rich protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 202.6 bits (514), Expect = 1.6e-48 Identity = 163/203 (80.30%), Postives = 177/203 (87.19%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. TAIR10
Match: AT2G10940.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 122.5 bits (306), Expect = 3.8e-28 Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. TAIR10
Match: AT1G62500.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 111.3 bits (277), Expect = 8.8e-25 Identity = 48/72 (66.67%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. TAIR10
Match: AT3G22142.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 103.2 bits (256), Expect = 2.4e-22 Identity = 46/71 (64.79%), Postives = 60/71 (84.51%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. TAIR10
Match: AT3G22120.1 (cell wall-plasma membrane linker protein) HSP 1 Score: 97.1 bits (240), Expect = 1.7e-20 Identity = 44/71 (61.97%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. TAIR10
Match: AT4G15160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18 Identity = 41/72 (56.94%), Postives = 58/72 (80.56%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. Swiss-Prot
Match: sp|Q00451|PRF1_SOLLC (36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.4e-18 Identity = 41/67 (61.19%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. Swiss-Prot
Match: sp|Q9SU33|ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.6e-15 Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. Swiss-Prot
Match: sp|Q9SU34|ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.6e-15 Identity = 37/79 (46.84%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. Swiss-Prot
Match: sp|Q9SU35|ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14 Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. Swiss-Prot
Match: sp|Q39176|ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.0e-14 Identity = 35/70 (50.00%), Postives = 51/70 (72.86%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. TrEMBL
Match: tr|Q8VWX9|Q8VWX9_CUCSA (Extensin-like protein (Fragment) OS=Cucumis sativus OX=3659 GN=EXTL PE=2 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 3.7e-70 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. TrEMBL
Match: tr|A0A0A0LT87|A0A0A0LT87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G228960 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 7.1e-69 Identity = 191/202 (94.55%), Postives = 191/202 (94.55%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. TrEMBL
Match: tr|A0A1S3B8S4|A0A1S3B8S4_CUCME (36.4 kDa proline-rich protein OS=Cucumis melo OX=3656 GN=6H01 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 7.3e-66 Identity = 194/202 (96.04%), Postives = 196/202 (97.03%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. TrEMBL
Match: tr|A0A2R6QRX9|A0A2R6QRX9_ACTCH (Hydrophobic seed protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc14490 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.8e-33 Identity = 150/202 (74.26%), Postives = 160/202 (79.21%), Query Frame = 0
BLAST of CsGy1G017050.1 vs. TrEMBL
Match: tr|A0A2K1WZY7|A0A2K1WZY7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G126000v3 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 4.2e-29 Identity = 66/89 (74.16%), Postives = 75/89 (84.27%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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