CsGy1G014010 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAGTACTACTACTACTACTACTACACATGGGATAACAAAACGGACAAGGCTCATTAGAGTTCTAGGAAGAAGCTTGTTGGGAGTTATATTCCTTGTTGCTCTTGGAATGATCATATGTTGGCTTGTTGTCATCCCCAAATCCCCACGTCTCATTGTGGAAACTGGCAAAGTCATAGCCCATAGTTCAACTATTAGTATGCTCAATGCCACCATAGCTTTCACTGTCAAAAGCTACAACCCTAACAAAAGAGCCTCCATTCACATGGATTATATGAGGATGATAGTCGATAACATGGGCGTGAGGTTTTCCTCCGCCATCCCCTCCTTCACCCTCACGCCCAGAAACCAAACCGTCTTGTCGTCAGCCGTCCAAGTCAACTTTGAATACCCATTTGGGTACACGGAAGAGATAAACCCAGAACTTCAATTCTCAGCTGAAGTCAGGTACAATCATTTAGAGATAACTTTAAAGTCAGACCCAAATTTTTGGATCAAAATGGAATATGCTCAACTTTTAAAAATATAAGTTTTCTTTTTACTATTTATTTTTACTATTTGCTTGTGTCATATTCTGCGAAAATTGGCAAAACTTTTTTGTGTGAGAATGGGAGAGAAAAATCAAACTTGGCGGAATGAGAGGAACAAGAGAAAATAGTCGTATCAGAAAAGGCGAGGGAAGCGAGAGAAAATAGATGTGAGGAGAAAAATTTCTAAATCCAAAAGAATGAGAGAGAAACCAGAGGAAATAGGAGAGAGCAATGACCTGAAAGGTGTAACTCAAAGAAATGAAAAAACAAGATCATAATCTGCGTGGAAAATCGTCAAATTTGATAATTTTTACAAAATATGATCTAACAAGATCATAAGAAAACCCTTTTATTTTTTGTTTCAGATTTTAAAAACTAATTAATTTTATGGATTGTACTTTTCACAAGTAAATTTCTAGTTTCATAATCTAAATCTATTTTTTTGTAAGGGTAACTCCATGCGACCATGCAGGGGTACGCAACGCTACCCCTTTCAAACAATAATAATTATAAATGCTTTGCAAAATTTTTAAAGATTTGTATGCATAACAATAAAATTCATCTATCATTATCACTACACTAGTAGAACTCCTTGACTTCTAATGATATGATCTTTTCCGATTCATAAATATACTTCTAGAACTTAATTTTAATTTTTTCATATTTTCATACTACAAGTTCTTTTGCATTATTTTATATCTGGTTGTTATATTTGAAACCGTCTCGTTCTTTTATTATACTAAATAGAATATTAAATTTTGTCTCTCTCTATTTTTTTTGTTGGGCTTTGTCCTTATCAGTTACAGTATCAAGAAATGGATGTCAAAACCTCGATTGCTTGAGATATATTGTAATCATATCTTGCTTAAAATCAATGATTCAACCGCGTTTGATAATACCAAATGCAAAGTGGATTTTTGA ATGAGAAGTACTACTACTACTACTACTACACATGGGATAACAAAACGGACAAGGCTCATTAGAGTTCTAGGAAGAAGCTTGTTGGGAGTTATATTCCTTGTTGCTCTTGGAATGATCATATGTTGGCTTGTTGTCATCCCCAAATCCCCACGTCTCATTGTGGAAACTGGCAAAGTCATAGCCCATAGTTCAACTATTAGTATGCTCAATGCCACCATAGCTTTCACTGTCAAAAGCTACAACCCTAACAAAAGAGCCTCCATTCACATGGATTATATGAGGATGATAGTCGATAACATGGGCGTGAGGTTTTCCTCCGCCATCCCCTCCTTCACCCTCACGCCCAGAAACCAAACCGTCTTGTCGTCAGCCGTCCAAGTCAACTTTGAATACCCATTTGGTTACAGTATCAAGAAATGGATGTCAAAACCTCGATTGCTTGAGATATATTGTAATCATATCTTGCTTAAAATCAATGATTCAACCGCGTTTGATAATACCAAATGCAAAGTGGATTTTTGA ATGAGAAGTACTACTACTACTACTACTACACATGGGATAACAAAACGGACAAGGCTCATTAGAGTTCTAGGAAGAAGCTTGTTGGGAGTTATATTCCTTGTTGCTCTTGGAATGATCATATGTTGGCTTGTTGTCATCCCCAAATCCCCACGTCTCATTGTGGAAACTGGCAAAGTCATAGCCCATAGTTCAACTATTAGTATGCTCAATGCCACCATAGCTTTCACTGTCAAAAGCTACAACCCTAACAAAAGAGCCTCCATTCACATGGATTATATGAGGATGATAGTCGATAACATGGGCGTGAGGTTTTCCTCCGCCATCCCCTCCTTCACCCTCACGCCCAGAAACCAAACCGTCTTGTCGTCAGCCGTCCAAGTCAACTTTGAATACCCATTTGGTTACAGTATCAAGAAATGGATGTCAAAACCTCGATTGCTTGAGATATATTGTAATCATATCTTGCTTAAAATCAATGATTCAACCGCGTTTGATAATACCAAATGCAAAGTGGATTTTTGA MRSTTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFEYPFGYSIKKWMSKPRLLEIYCNHILLKINDSTAFDNTKCKVDF
BLAST of CsGy1G014010 vs. NCBI nr
Match: XP_011654134.1 (PREDICTED: protein YLS9-like isoform X2 [Cucumis sativus] >KGN64866.1 hypothetical protein Csa_1G132760 [Cucumis sativus]) HSP 1 Score: 319.3 bits (817), Expect = 8.0e-84 Identity = 172/189 (91.01%), Postives = 172/189 (91.01%), Query Frame = 0
BLAST of CsGy1G014010 vs. NCBI nr
Match: XP_008462348.1 (PREDICTED: protein YLS9-like [Cucumis melo]) HSP 1 Score: 302.8 bits (774), Expect = 7.7e-79 Identity = 160/188 (85.11%), Postives = 167/188 (88.83%), Query Frame = 0
BLAST of CsGy1G014010 vs. NCBI nr
Match: XP_011654126.1 (PREDICTED: protein YLS9-like isoform X1 [Cucumis sativus]) HSP 1 Score: 249.6 bits (636), Expect = 7.8e-63 Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0
BLAST of CsGy1G014010 vs. NCBI nr
Match: XP_008462337.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]) HSP 1 Score: 222.2 bits (565), Expect = 1.3e-54 Identity = 112/175 (64.00%), Postives = 134/175 (76.57%), Query Frame = 0
BLAST of CsGy1G014010 vs. NCBI nr
Match: XP_011648454.1 (PREDICTED: uncharacterized protein LOC105434469 [Cucumis sativus] >KGN64867.1 hypothetical protein Csa_1G132770 [Cucumis sativus]) HSP 1 Score: 221.5 bits (563), Expect = 2.3e-54 Identity = 111/175 (63.43%), Postives = 135/175 (77.14%), Query Frame = 0
BLAST of CsGy1G014010 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 52.4 bits (124), Expect = 3.3e-07 Identity = 46/186 (24.73%), Postives = 78/186 (41.94%), Query Frame = 0
BLAST of CsGy1G014010 vs. TAIR10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 40.8 bits (94), Expect = 9.9e-04 Identity = 30/77 (38.96%), Postives = 44/77 (57.14%), Query Frame = 0
BLAST of CsGy1G014010 vs. TrEMBL
Match: tr|A0A0A0LY09|A0A0A0LY09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 5.3e-84 Identity = 172/189 (91.01%), Postives = 172/189 (91.01%), Query Frame = 0
BLAST of CsGy1G014010 vs. TrEMBL
Match: tr|A0A1S3CGS4|A0A1S3CGS4_CUCME (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 5.1e-79 Identity = 160/188 (85.11%), Postives = 167/188 (88.83%), Query Frame = 0
BLAST of CsGy1G014010 vs. TrEMBL
Match: tr|A0A1S3CGR5|A0A1S3CGR5_CUCME (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500709 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 8.8e-55 Identity = 112/175 (64.00%), Postives = 134/175 (76.57%), Query Frame = 0
BLAST of CsGy1G014010 vs. TrEMBL
Match: tr|A0A0A0LVK9|A0A0A0LVK9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 1.5e-54 Identity = 111/175 (63.43%), Postives = 135/175 (77.14%), Query Frame = 0
BLAST of CsGy1G014010 vs. TrEMBL
Match: tr|A0A1S3CGQ5|A0A1S3CGQ5_CUCME (uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 3.2e-49 Identity = 106/184 (57.61%), Postives = 130/184 (70.65%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |