CsGy0G000510 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAATCTCGGTCTCTACAACGTCTCCATGGACGACAAATCAACCCACAAAACCCTCTTTCCGATTCCTCTTAATCATCGACTTCCTCCGTTTTCAAAACCTTGCCTTTGGCTCTGTTCCTCCACCTCTACAAAACTAAAACAGAGTACTCCTCCGGCGTCCTCAAAATCGGTGGAATCCAGAGCCGAGGAGGGCTGGTGAGTACAGAGGAGATGAAATGGGTTATGGGGAATTTAGGGATTGATTGTAGCGAAGGGTCCTCTGTTCCTCTGTTTGGGTCAGCGGAAGAAGTGGCGGAGATGTTTGATCAAACGGCGGCTAGTGTAGCGGAGGTGAAACAAGCTTTTGGTGTGTTTGATGTTAATGGCGATGGGTTTATCGACGTTGAAGAATTGCAGAGAGTGATGTGTGTTTTGGGATTTAAAGAAGGAGAAGGGATTGAGAATTGCGAGAAGATGATTCGTAAGTTTGATTCTAACAAAGATGGGAGATTGATTTTGAAGAATTTGTTAAATTGA ATGATGAATCTCGAGTACTCCTCCGGCGTCCTCAAAATCGGTGGAATCCAGAGCCGAGGAGGGCTGGTGAGTACAGAGGAGATGAAATGGGTTATGGGGAATTTAGGGATTGATTGTAGCGAAGGGTCCTCTGTTCCTCTGTTTGGGTCAGCGGAAGAAGTGGCGGAGATGTTTGATCAAACGGCGGCTAGTGTAGCGGAGGTGAAACAAGCTTTTGGTGTGTTTGATGTTAATGGCGATGGGTTTATCGACGTTGAAGAATTGCAGAGAGTGATGTGTGTTTTGGGATTTAAAGAAGGAGAAGGGATTGAGAATTGCGAGAAGATGATTCGTAAGTTTGATTCTAACAAAGATGGGAGATTGATTTTGAAGAATTTGTTAAATTGA ATGATGAATCTCGAGTACTCCTCCGGCGTCCTCAAAATCGGTGGAATCCAGAGCCGAGGAGGGCTGGTGAGTACAGAGGAGATGAAATGGGTTATGGGGAATTTAGGGATTGATTGTAGCGAAGGGTCCTCTGTTCCTCTGTTTGGGTCAGCGGAAGAAGTGGCGGAGATGTTTGATCAAACGGCGGCTAGTGTAGCGGAGGTGAAACAAGCTTTTGGTGTGTTTGATGTTAATGGCGATGGGTTTATCGACGTTGAAGAATTGCAGAGAGTGATGTGTGTTTTGGGATTTAAAGAAGGAGAAGGGATTGAGAATTGCGAGAAGATGATTCGTAAGTTTGATTCTAACAAAGATGGGAGATTGATTTTGAAGAATTTGTTAAATTGA MMNLEYSSGVLKIGGIQSRGGLVSTEEMKWVMGNLGIDCSEGSSVPLFGSAEEVAEMFDQTAASVAEVKQAFGVFDVNGDGFIDVEELQRVMCVLGFKEGEGIENCEKMIRKFDSNKDGRLILKNLLN
BLAST of CsGy0G000510 vs. NCBI nr
Match: XP_004141573.1 (PREDICTED: probable calcium-binding protein CML30 [Cucumis sativus] >KGN52470.1 Calcium ion binding protein [Cucumis sativus]) HSP 1 Score: 184.1 bits (466), Expect = 3.0e-43 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of CsGy0G000510 vs. NCBI nr
Match: XP_008459700.2 (PREDICTED: probable calcium-binding protein CML30 [Cucumis melo]) HSP 1 Score: 172.9 bits (437), Expect = 6.8e-40 Identity = 86/92 (93.48%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of CsGy0G000510 vs. NCBI nr
Match: XP_022939128.1 (probable calcium-binding protein CML45 [Cucurbita moschata]) HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29 Identity = 69/104 (66.35%), Postives = 80/104 (76.92%), Query Frame = 0
BLAST of CsGy0G000510 vs. NCBI nr
Match: XP_022993675.1 (probable calcium-binding protein CML30 [Cucurbita maxima]) HSP 1 Score: 123.6 bits (309), Expect = 4.7e-25 Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of CsGy0G000510 vs. NCBI nr
Match: XP_008341587.1 (PREDICTED: probable calcium-binding protein CML45 [Malus domestica]) HSP 1 Score: 110.2 bits (274), Expect = 5.4e-21 Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 0
BLAST of CsGy0G000510 vs. TAIR10
Match: AT3G29000.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 95.9 bits (237), Expect = 1.9e-20 Identity = 49/99 (49.49%), Postives = 69/99 (69.70%), Query Frame = 0
BLAST of CsGy0G000510 vs. TAIR10
Match: AT5G39670.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 92.0 bits (227), Expect = 2.8e-19 Identity = 46/97 (47.42%), Postives = 66/97 (68.04%), Query Frame = 0
BLAST of CsGy0G000510 vs. TAIR10
Match: AT4G12860.1 (EF hand calcium-binding protein family) HSP 1 Score: 65.1 bits (157), Expect = 3.6e-11 Identity = 37/108 (34.26%), Postives = 62/108 (57.41%), Query Frame = 0
BLAST of CsGy0G000510 vs. TAIR10
Match: AT5G44460.1 (calmodulin like 43) HSP 1 Score: 63.9 bits (154), Expect = 8.1e-11 Identity = 42/128 (32.81%), Postives = 61/128 (47.66%), Query Frame = 0
BLAST of CsGy0G000510 vs. TAIR10
Match: AT1G21550.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 58.9 bits (141), Expect = 2.6e-09 Identity = 40/126 (31.75%), Postives = 62/126 (49.21%), Query Frame = 0
BLAST of CsGy0G000510 vs. Swiss-Prot
Match: sp|Q9MBG5|CML45_ARATH (Probable calcium-binding protein CML45 OS=Arabidopsis thaliana OX=3702 GN=CML45 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.5e-19 Identity = 49/99 (49.49%), Postives = 69/99 (69.70%), Query Frame = 0
BLAST of CsGy0G000510 vs. Swiss-Prot
Match: sp|Q93Z27|CML46_ARATH (Probable calcium-binding protein CML46 OS=Arabidopsis thaliana OX=3702 GN=CML46 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 5.0e-18 Identity = 46/97 (47.42%), Postives = 66/97 (68.04%), Query Frame = 0
BLAST of CsGy0G000510 vs. Swiss-Prot
Match: sp|Q9SU00|CML2_ARATH (Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.6e-10 Identity = 37/108 (34.26%), Postives = 62/108 (57.41%), Query Frame = 0
BLAST of CsGy0G000510 vs. Swiss-Prot
Match: sp|Q9FI19|CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana OX=3702 GN=CML43 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09 Identity = 42/128 (32.81%), Postives = 61/128 (47.66%), Query Frame = 0
BLAST of CsGy0G000510 vs. Swiss-Prot
Match: sp|Q0DZP5|CML17_ORYSJ (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica OX=39947 GN=CML17 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of CsGy0G000510 vs. TrEMBL
Match: tr|A0A0A0KS94|A0A0A0KS94_CUCSA (Calcium ion binding protein OS=Cucumis sativus OX=3659 GN=Csa_5G636620 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 2.0e-43 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of CsGy0G000510 vs. TrEMBL
Match: tr|A0A1S3CAB3|A0A1S3CAB3_CUCME (probable calcium-binding protein CML30 OS=Cucumis melo OX=3656 GN=LOC103498740 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 4.5e-40 Identity = 86/92 (93.48%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of CsGy0G000510 vs. TrEMBL
Match: tr|A0A067JTD1|A0A067JTD1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19861 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.0e-20 Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = 0
BLAST of CsGy0G000510 vs. TrEMBL
Match: tr|A0A1U8PPB0|A0A1U8PPB0_GOSHI (probable calcium-binding protein CML45 OS=Gossypium hirsutum OX=3635 GN=LOC107960357 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 8.8e-20 Identity = 57/108 (52.78%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of CsGy0G000510 vs. TrEMBL
Match: tr|A0A2P5WSM8|A0A2P5WSM8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA26577 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 8.8e-20 Identity = 57/108 (52.78%), Postives = 75/108 (69.44%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |