Cp4.1LG11g07120.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATCGCCACGTGGCCTTCTTCAACCTCAGAATCCATTTCTCAAAAACCTGATTCCCCTCATTCTTCTTCTCCAATTTCCACCATGATCCTCTCTCTCTCTTCCCCTTTCTCACTCCTCTCTTTCATCCTATTCTTCGCCTCTCCTCTCATCGCCGCACCTGAGCCATCCACCATCTACGATCATCTGCATCGTCATGGCCTCCCCATTGGCCTCCTCCCCAAGAACATTACCAGATTCTCAATCGACTCTTCCACCGGCCGTTTTCAGGTCTTCCTCGACCAGCCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCCGGCAGGCTCGCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCTTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCACACCTCTGGTGTAATACATTTCGACGTCGGCGTTGTTGACAAACAGTTCTCTCTTTCTCTGTTTGAGTCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCAATCCGTCGCGTCGGATGGAGTTTCTCTCGGTTTGGATGGGGCGTTTTGATGGTACGTTGGAGCTATTGTTTTTGCTGGTTCATCATCTATTTTACTTGTACCGAATTGATATTTATGGTGCGATTGTAATTATGATGATGTTGATATCTTCGGTTAGATTTTTGCGTTGTTCATTGTGGATCAGGAAGCATTGGTATTATACTTCACATAGGGCAGGCATGTTGTGCTAGTTATCATTACGTTAAAATCCATGTTCTGATTTGCTTTGCTATATTGTAGAACTGGGATATTTGTTGATTCCTGTTCTTCAAAATTTTATAGAAATATATGGTCAGGGAATATTACTTCTCTTTAGTTCATTGTTTTCCTACCTGCCAGTCAAAAATTAGTATTAGATTAATGTTTTGTGGTGGAAACATGCAGTTTTTGCTGATTTAGAAGAAATCATTGGAGAGGAATGTAAAATTTGCGATAGAATTTGAAGTTGTAGAGACGTGGTAATGGAGTGAATATTCTGGACATTGAATTAATGCTATCTCTGTTTTTCTTTTAAGAATAACGTGTTCATTGTGGCTGTATTGTTGGTCGAGCCATATCTTATTGCATTCTTGTGTTTGTTCTCTCCGAGTGAGTGATGTGTGCAGATAGCATTCTGAAAGTTGAATAGATTGTCATGTCTATTATTGTAAGTTGCAAAGATTGGCACTGATTAAGGGAATTATTGAAGGAGACGGCCTAAATGTAGTTGTCTACATGTTAACTAATACCACTATAACAGCCCAAGTCCACCGCCGCTAGCAGATACTGTCCTCTTTGGGCTTTCCCTTTCGGACTTCCCCTCAAGGTTTTTAAAACGCGTATGCTAGGAAGAGGTTTCCACACCCTTATAAATAATACTTTGTTCTCCTCCCCAATCGATGTGGGACCCTCCAATCCACCCTCCTTCGGAGCCTAGTGTCCTTGCTGGCACAATGCCTCATGTCCACCTCTTTCAAGGCTTAGCCTCCTCGTTGGCACATCGCCCAATGCCTAGTTCTGATACTATTTGTAATATAGTAATTTCCCTTTCCCACCCCAAATGGTGCAAAATTATTAGTCACCTTGGGGTAACCTCCTTGAATAATTAAGATCTTATGCATTCTCACATCTTTGGAATCAACTTATATGAATAAGATGAGTATTCATGTTTAAACTCTAACCTTCATGATTTTTATTCAAATTACAATGCATTTTTCTTTGATATTTCACCAGGCTGCTTTGCATTCGTCAGAATTTTATATTATTATATGGAAGTTCTTCATAATCTAGCCATAGTTACAAGTCATATGTTTTTAATAAGAGGTTACTTCTTTGGATTGTCAATAATTTCAGAATGAAGTACAGAACCTTCAGCTTGAAGACGGGGAACTAAGGGCAACATCATATAGATTAGCAATAAAGAAATATCGTGGCAAGAGTCTGGCTTTGCTGGTCTGGTAAATTTTCTCTACTACTTGTGGACTGCTTTTATTTTGTATAGTCTTTGTTTCCTGATAGTCCTGTCTGATGGGGAAAGGAGGCTAAAAGCTCACACAAGTATTTAGCCTCCAATCCTTCCAAGTAGAATTCTGAATTTGAGGGAGGGAGATTGTTGTAGAAATATTTAGCCTCCAATCCTTCCAAGTAGAATTCTGAATTTGAGGGAGGGAGATTGTTGTAGAAATATTTAGCCTCCAATCCTTCAAATCTATACTATTATCTGAGTTTAAGTGAGGGAGATTGTTGCAAGTTTTTTGTTTAATCTCTCTATGAAGTATATTACTGGTTCTGGCTGTGGTTGGTTTTGGCTACTCACATAAAGAAGTGTTGTTTTTGTTGTCTTGTTCTATCTTATAGCCATAAAATCTTTGCTTGTAAATGTACACTGCAAAAGTGATCTTTTAGTAGTTAAAGAGGATTCACATGTATCTTATATAGCTGACATTTTCATTCATTTGATGTTTAGATATAGATTCATATTATTCTTCAATTACCATTCACGTGTTTGTATTATGAAGCTTAAAGACATATAATATCCCCCAATCACTATATATTTTTGTAGGAAAAAAGAAAAAGGAATCGTATTCAGGTGCAAGAACCAATTGATGAAGTTTAAGAAAAAGGCTATTCAATTGGCATGAATAAGGTATAGGATGATGGGTACAATAATTTACTTGTTGACCAATTTTGTTCTTTTCTTGTCTTCAGAACTCTTTTACTTTTCCATTCGAGCTACGCTCGGTTGATTGACGCTCTTGTAGGCTTATTTTGCATATAAATTCTCGGGTCCCTAAGTCCCAGATCCTGCATCCGCCAAGAAA TATCGCCACGTGGCCTTCTTCAACCTCAGAATCCATTTCTCAAAAACCTGATTCCCCTCATTCTTCTTCTCCAATTTCCACCATGATCCTCTCTCTCTCTTCCCCTTTCTCACTCCTCTCTTTCATCCTATTCTTCGCCTCTCCTCTCATCGCCGCACCTGAGCCATCCACCATCTACGATCATCTGCATCGTCATGGCCTCCCCATTGGCCTCCTCCCCAAGAACATTACCAGATTCTCAATCGACTCTTCCACCGGCCGTTTTCAGGTCTTCCTCGACCAGCCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCCGGCAGGCTCGCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCTTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCACACCTCTGGTGTAATACATTTCGACGTCGGCGTTGTTGACAAACAGTTCTCTCTTTCTCTGTTTGAGTCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCAATCCGTCGCGTCGGATGGAGTTTCTCTCGGTTTGGATGGGGCGTTTTGAAATGAAGTACAGAACCTTCAGCTTGAAGACGGGGAACTAAGGGCAACATCATATAGATTAGCAATAAAGAAATATCGTGGCAAGAGTCTGGCTTTGCTGGTCTGGAAAAAAGAAAAAGGAATCGTATTCAGGTGCAAGAACCAATTGATGAAGTTTAAGAAAAAGGCTATTCAATTGGCATGAATAAGGTATAGGATGATGGGTACAATAATTTACTTGTTGACCAATTTTGTTCTTTTCTTGTCTTCAGAACTCTTTTACTTTTCCATTCGAGCTACGCTCGGTTGATTGACGCTCTTGTAGGCTTATTTTGCATATAAATTCTCGGGTCCCTAAGTCCCAGATCCTGCATCCGCCAAGAAA ATGATCCTCTCTCTCTCTTCCCCTTTCTCACTCCTCTCTTTCATCCTATTCTTCGCCTCTCCTCTCATCGCCGCACCTGAGCCATCCACCATCTACGATCATCTGCATCGTCATGGCCTCCCCATTGGCCTCCTCCCCAAGAACATTACCAGATTCTCAATCGACTCTTCCACCGGCCGTTTTCAGGTCTTCCTCGACCAGCCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCCGGCAGGCTCGCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCTTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCACACCTCTGGTGTAATACATTTCGACGTCGGCGTTGTTGACAAACAGTTCTCTCTTTCTCTGTTTGAGTCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCAATCCGTCGCGTCGGATGGAGTTTCTCTCGGTTTGGATGGGGCGTTTTGA MILSLSSPFSLLSFILFFASPLIAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSVASDGVSLGLDGAF
BLAST of Cp4.1LG11g07120.1 vs. TrEMBL
Match: A0A0A0LN19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G99990 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.3e-70 Identity = 136/164 (82.93%), Postives = 147/164 (89.63%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. TrEMBL
Match: W9S3W1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005575 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 4.0e-51 Identity = 101/141 (71.63%), Postives = 117/141 (82.98%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. TrEMBL
Match: A0A067K3P8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18043 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 6.9e-51 Identity = 100/156 (64.10%), Postives = 128/156 (82.05%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. TrEMBL
Match: M5W029_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011321mg PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 7.1e-48 Identity = 94/146 (64.38%), Postives = 116/146 (79.45%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. TrEMBL
Match: A0A061EZD5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_025141 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.7e-46 Identity = 100/159 (62.89%), Postives = 117/159 (73.58%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. TAIR10
Match: AT5G16380.1 (AT5G16380.1 Protein of unknown function, DUF538) HSP 1 Score: 167.5 bits (423), Expect = 6.8e-42 Identity = 83/144 (57.64%), Postives = 105/144 (72.92%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. TAIR10
Match: AT3G07470.1 (AT3G07470.1 Protein of unknown function, DUF538) HSP 1 Score: 161.8 bits (408), Expect = 3.7e-40 Identity = 72/121 (59.50%), Postives = 94/121 (77.69%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. TAIR10
Match: AT3G07460.2 (AT3G07460.2 Protein of unknown function, DUF538) HSP 1 Score: 149.4 bits (376), Expect = 1.9e-36 Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. TAIR10
Match: AT1G61667.1 (AT1G61667.1 Protein of unknown function, DUF538) HSP 1 Score: 125.9 bits (315), Expect = 2.3e-29 Identity = 59/130 (45.38%), Postives = 80/130 (61.54%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. TAIR10
Match: AT5G54530.1 (AT5G54530.1 Protein of unknown function, DUF538) HSP 1 Score: 124.0 bits (310), Expect = 8.6e-29 Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. NCBI nr
Match: gi|659082203|ref|XP_008441718.1| (PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo]) HSP 1 Score: 284.3 bits (726), Expect = 1.4e-73 Identity = 143/167 (85.63%), Postives = 148/167 (88.62%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. NCBI nr
Match: gi|449442285|ref|XP_004138912.1| (PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus]) HSP 1 Score: 273.9 bits (699), Expect = 1.9e-70 Identity = 136/164 (82.93%), Postives = 147/164 (89.63%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. NCBI nr
Match: gi|1009118300|ref|XP_015875784.1| (PREDICTED: uncharacterized protein LOC107412521 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 218.0 bits (554), Expect = 1.2e-53 Identity = 109/153 (71.24%), Postives = 126/153 (82.35%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. NCBI nr
Match: gi|1009118302|ref|XP_015875785.1| (PREDICTED: uncharacterized protein LOC107412521 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 218.0 bits (554), Expect = 1.2e-53 Identity = 109/153 (71.24%), Postives = 126/153 (82.35%), Query Frame = 1
BLAST of Cp4.1LG11g07120.1 vs. NCBI nr
Match: gi|703116813|ref|XP_010101226.1| (hypothetical protein L484_005575 [Morus notabilis]) HSP 1 Score: 209.1 bits (531), Expect = 5.8e-51 Identity = 101/141 (71.63%), Postives = 117/141 (82.98%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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