Cp4.1LG11g01650.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g01650.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	BnaA10g05150D protein
Location	Cp4.1LG11 : 903246 .. 905096 (+)
Sequence length	1703

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATCTAATCAGTTCGATTTGGAAAAAAAATTTAATTAAAAGAAGAAAGATATCAAGTCGAACTGATTTAAAACGAGCCTTATGATACGAAGTAGCACATTTTAGGGGAAAAAAAGAGTAGACTGATCAACTTCTTCATTTAAAACGAGCAAACTTTGTATATGGACAGCATACCAGATTGATACCAAACTTTTAAATCGGCTGTTTGTTTTTCGTACTCTTCTCCTCCCATGAGCTTTAATATTGGAAGTGCCGCCCCCCGACCAGGTTGTCAAAAGTAGGAGATATTGGTTGGTTAATGTCTCAATTCGCCCAAATCTTGAGCATTAAGAGAGAATCCAAGCGCCTAGAAAAGTAGGTGTTAGATTAGCATACAGCATGCCAATTAATTTTCGAAGTAATGGAAGAATGAGAATACAGTGTGAGCTTTGTGCTGGAATCTTTAGTGCAGTTCAACATCATTTGTTGGAGTGTCTTGTGCTCTCTTCTAACTTTGTCTTTACACCGAAGGATTAGAAAACGTTATTTTCAATAAGCTGTGAAGGCACTGTCAAAAATGGAGCCATTTTGAACCCTCAGTAAGGGGGCATTAATTCTTTATATAGTTTCTGGCTCATAAACCAACCAAAAAATCTTGCTTCTCCAATATGGGCGTCTTTTATCAAGAAGACCCACCAAATCCTTCAAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGTACTCTGCAACTGCCATAATTTTAGCAAACCACAGCCAAATTCCAACGCAGAGGATGATTATCCAACGAGTGACTTTGATGATGAAGAGGAAGTACTCACTCACCAACTTATCCTCGCATATCAACAGATATATAACCTTTTGTTTACTCTTTCACCTTACATGAAATCTGTTTCTCTAAGTTTTATATCCATTTCTCAGGAAATTGTATCGGAAATCAGAAGTCGGGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCAGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTATATATTACTTCAATGGAGATTGAGAAGATAGATGAACCTGGAAATGAAGATAACACAGGAGATGAGTTCTACTCAGTTCAGAGTTTTCTCACATGTTCAAGTGCTGCAACAAAGGAAGCATTCTTTTCTGTAGAGGCCAACTTTTCCCGATGTTCGAGCTTAAATGGTCTTAATTTTCTGGATGAAGATCTCAAGAGGCGCACCATCTTACAGGAATTGTTTCATTGTGAAGGATGGCCGTTTGGTCTTTGCAGGAAAGCGGTGTTACTTCCACCTCTGCCCAAGTCGCCATCTGAATCTTGGTTATGGAGTAAGGGCACCAAAATTGTGAAGATATGATGTCAAAATTCGGTGCTAAGTTCTGTTTTTTTGTATTTTGCTGCTGCCAGAAGTAACGTTGAGATTGAAGAGTAAAACGTGGCTCCTCTTAGTAACAAAATTCTTCAAGCTATTGATCTGATTAAAAACAATTTTCAACTCTTCTTCACCTCATAAACATATGTATTAACCCTCTTAAATTAATTACCGCTAATATGCAGTTGCAGTAGTAATAATCATAGTTAAGGTTGCCCCCTCCGTAGATCACAGAACTCTTCAAGAACACATAAATGCAAAAACATGAAACTGATGATATAAACTTGTAAAAGGAACCCAATAATTGGCAAACATGCAAGGAAGTTAAATTCCGAGAACTCATTTGTCAATGTGAGATCTTATTCAATTGCCATTAAATCCACAATTTATTGGATTTGAGAGAAGACAGACAATAAAACATTGAAAAACAAACACCCAAACTAGAGTAGGCTAGCAACTACAGCCAAACTT

mRNA sequence

AAGATCTAATCAGTTCGATTTGGAAAAAAAATTTAATTAAAAGAAGAAAGATATCAAGTCGAACTGATTTAAAACGAGCCTTATGATACGAAGTAGCACATTTTAGGGGAAAAAAAGAGTAGACTGATCAACTTCTTCATTTAAAACGAGCAAACTTTGTATATGGACAGCATACCAGATTGATACCAAACTTTTAAATCGGCTGTTTGTTTTTCGTACTCTTCTCCTCCCATGAGCTTTAATATTGGAAGTGCCGCCCCCCGACCAGGTTGTCAAAAGTAGGAGATATTGGTTGGTTAATGTCTCAATTCGCCCAAATCTTGAGCATTAAGAGAGAATCCAAGCGCCTAGAAAAGTAGGTGTTAGATTAGCATACAGCATGCCAATTAATTTTCGAAGTAATGGAAGAATGAGAATACAGTGTGAGCTTTGTGCTGGAATCTTTAGTGCAGTTCAACATCATTTGTTGGAGTGTCTTGTGCTCTCTTCTAACTTTGTCTTTACACCGAAGGATTAGAAAACGTTATTTTCAATAAGCTGTGAAGGCACTGTCAAAAATGGAGCCATTTTGAACCCTCAGTAAGGGGGCATTAATTCTTTATATAGTTTCTGGCTCATAAACCAACCAAAAAATCTTGCTTCTCCAATATGGGCGTCTTTTATCAAGAAGACCCACCAAATCCTTCAAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGTACTCTGCAACTGCCATAATTTTAGCAAACCACAGCCAAATTCCAACGCAGAGGATGATTATCCAACGAGTGACTTTGATGATGAAGAGGAAGAAATTGTATCGGAAATCAGAAGTCGGGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCAGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTATATATTACTTCAATGGAGATTGAGAAGATAGATGAACCTGGAAATGAAGATAACACAGGAGATGAGTTCTACTCAGTTCAGAGTTTTCTCACATGTTCAAGTGCTGCAACAAAGGAAGCATTCTTTTCTGTAGAGGCCAACTTTTCCCGATGTTCGAGCTTAAATGGTCTTAATTTTCTGGATGAAGATCTCAAGAGGCGCACCATCTTACAGGAATTGTTTCATTGTGAAGGATGGCCGTTTGGTCTTTGCAGGAAAGCGGTGTTACTTCCACCTCTGCCCAAGTCGCCATCTGAATCTTGGTTATGGAGTAAGGGCACCAAAATTGTGAAGATATGATGTCAAAATTCGGTGCTAAGTTCTGTTTTTTTGTATTTTGCTGCTGCCAGAATAACAAAATTCTTCAAGCTATTGATCTGATTAAAAACAATTTTCAACTCTTCTTCACCTCATAAACATATGTATTAACCCTCTTAAATTAATTACCGCTAATATGCAGTTGCAGTAGTAATAATCATAGTTAAGGTTGCCCCCTCCGTAGATCACAGAACTCTTCAAGAACACATAAATGCAAAAACATGAAACTGATGATATAAACTTGTAAAAGGAACCCAATAATTGGCAAACATGCAAGGAAGTTAAATTCCGAGAACTCATTTGTCAATGTGAGATCTTATTCAATTGCCATTAAATCCACAATTTATTGGATTTGAGAGAAGACAGACAATAAAACATTGAAAAACAAACACCCAAACTAGAGTAGGCTAGCAACTACAGCCAAACTT

Coding sequence (CDS)

ATGGGCGTCTTTTATCAAGAAGACCCACCAAATCCTTCAAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGTACTCTGCAACTGCCATAATTTTAGCAAACCACAGCCAAATTCCAACGCAGAGGATGATTATCCAACGAGTGACTTTGATGATGAAGAGGAAGAAATTGTATCGGAAATCAGAAGTCGGGCAATGGAAAAGTTGAGACGAAAGACTAACCTGTCAGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTATATATTACTTCAATGGAGATTGAGAAGATAGATGAACCTGGAAATGAAGATAACACAGGAGATGAGTTCTACTCAGTTCAGAGTTTTCTCACATGTTCAAGTGCTGCAACAAAGGAAGCATTCTTTTCTGTAGAGGCCAACTTTTCCCGATGTTCGAGCTTAAATGGTCTTAATTTTCTGGATGAAGATCTCAAGAGGCGCACCATCTTACAGGAATTGTTTCATTGTGAAGGATGGCCGTTTGGTCTTTGCAGGAAAGCGGTGTTACTTCCACCTCTGCCCAAGTCGCCATCTGAATCTTGGTTATGGAGTAAGGGCACCAAAATTGTGAAGATATGA

Protein sequence

MGVFYQEDPPNPSRKCFLAGALKDVLCNCHNFSKPQPNSNAEDDYPTSDFDDEEEEIVSEIRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKIDEPGNEDNTGDEFYSVQSFLTCSSAATKEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQELFHCEGWPFGLCRKAVLLPPLPKSPSESWLWSKGTKIVKI

Homology

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BLAST of Cp4.1LG11g01650.1 vs. TrEMBL
Match: A0A0A0LRD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360040 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.1e-102
Identity = 183/202 (90.59%), Postives = 189/202 (93.56%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKCFLAGALKDVLCNCHNFSKPQPNSNAEDDYPTSDFDDEEEEIVSE 60
           MGVFYQEDPPNPSRKCFLAGALKD  CNCH F KP P  N EDDYPTSDFDD EEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60

Query: 61  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKIDEPGNEDNTGDEFYSVQSFL 120
           IR+RAMEKL+RKTNLSDSFSWVFSPATKELYITSMEIEK+DE GNEDN GDEFYSV+SFL
Sbjct: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120

Query: 121 T-CSSAATKEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQELFHCEGWPFGLCRKAVL 180
           T CS+AAT EAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQE+FHCEGWPFGLCRKAVL
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 181 LPPLPKSPSESWLWSKGTKIVK 202
           LPPLPKSPSESWLWSKGTKIVK
Sbjct: 181 LPPLPKSPSESWLWSKGTKIVK 202

[Close]

BLAST of Cp4.1LG11g01650.1 vs. TrEMBL
Match: A0A061FAY9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033876 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-59
Identity = 122/210 (58.10%), Postives = 155/210 (73.81%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDVLCNCHNFSKPQPNSNAEDDYPTSDFDDEEEEIVS 60
           M VFYQE+ P  S++C FLA  LK+   NCH F     +S  E++YPTSD DDE E +VS
Sbjct: 1   MSVFYQEEQPRQSKRCKFLASVLKEAFSNCHAFGG---HSGPEEEYPTSDIDDESEVVVS 60

Query: 61  EIRSRAMEKLRRKTNLS-DSFSWVFSPATKELYITSMEIEKIDEPGNEDNTGDEFYSVQS 120
           EIRSRAMEK++R+ +L+ ++ SWVFSP+T EL+ITS   ++ D+  NED   +EF+SV S
Sbjct: 61  EIRSRAMEKMKRRPSLTAENISWVFSPSTGELFITSKHAKRRDKD-NEDEEREEFFSVGS 120

Query: 121 -FLTCSSAATKEAFFSVEANFSRCSSLNGLNFLD------EDLKRRTILQELFHCEGWPF 180
            F  CSSA ++EAF S +ANFSRCSSLN ++F D      +D +RR+I+QE  HCEGWPF
Sbjct: 121 CFSFCSSAVSREAFLSAKANFSRCSSLNKVDFPDFWKFDLQDFRRRSIIQEFCHCEGWPF 180

Query: 181 GLCRKAVLLPPLPKSPSESWLWSKGTKIVK 202
           GLCRKAVLLPPLPKSPSESW W KGT++ K
Sbjct: 181 GLCRKAVLLPPLPKSPSESWSWRKGTRLAK 206

[Close]

BLAST of Cp4.1LG11g01650.1 vs. TrEMBL
Match: W9QPV8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003373 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.7e-59
Identity = 121/207 (58.45%), Postives = 155/207 (74.88%), Query Frame = 1


Query: 1   MGVFY-QEDPPNPSRKC-FLAGALKDVLCNCHNFSKPQPNSNAEDDYPTSDFDDEEEEIV 60
           M +FY +E+P NPS++C FLA  LKD   NCH+F      SN +++YPTSDFD+E+E +V
Sbjct: 1   MTIFYHEEEPTNPSKRCKFLAACLKDAFSNCHDFGGCLSTSNPDEEYPTSDFDEEQEVVV 60

Query: 61  SEIRSRAMEKLRRKTNL--SDSFSWVFSPATKELYITSMEIEKIDEPGNEDNTGDEFYSV 120
           S IRS A+EKLRRK  L  SDSFSWV+S  T+ELYIT   IE+ ++    D  G+EF SV
Sbjct: 61  SAIRSGALEKLRRKPVLLMSDSFSWVYSTVTRELYITPKGIEQKEDMNGVDCEGEEFLSV 120

Query: 121 QS-FLTCSSAATKEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQELFHCEGWPFGLCR 180
           +S F  CSSAA+++ F SV+++FSR SSLNG++   ++ +RR+I+QE  HCEGWPFGLCR
Sbjct: 121 KSCFSCCSSAASRDVFVSVKSSFSRSSSLNGVDL--KEFQRRSIIQEFCHCEGWPFGLCR 180

Query: 181 KAVLLPPLPKSPSESWLWSKGTKIVKI 203
           KAVLLPPLPKSPSESW W KGTK  K+
Sbjct: 181 KAVLLPPLPKSPSESWSWRKGTKTAKL 205

[Close]

BLAST of Cp4.1LG11g01650.1 vs. TrEMBL
Match: B9GNX6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12930g PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.0e-57
Identity = 123/210 (58.57%), Postives = 152/210 (72.38%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDVLCNCHNFSKPQPNSNAEDDYPTSDFDDEEEEIVS 60
           MGVF+ E+ PNPS+KC FLA  LKDV  NC         S+ E++YPT+D DDE+E IVS
Sbjct: 1   MGVFHHEEAPNPSKKCKFLAATLKDVFSNCSTCGGRISTSSPEEEYPTADVDDEQEVIVS 60

Query: 61  EIRSRAMEKLRRKTNL-SDSFSWVFSPATKELYITSMEIEKIDEPGNEDN-----TGDEF 120
           EIRSRAMEKLR K  + +DSFSWV+SP T EL++T   +++ D+ GN+DN     T +EF
Sbjct: 61  EIRSRAMEKLRHKPFIFTDSFSWVYSPKTGELFVTPKAVQQKDD-GNDDNDEYDDTREEF 120

Query: 121 YSVQSFLTC-SSAATKEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQELFHCEGWPFG 180
           +SV S L+C SSA ++EAF S + NFSRCSS N   F   D  +R+ILQE  HC+GWPFG
Sbjct: 121 FSVGSCLSCCSSALSREAFVSAKPNFSRCSSFN--EFCFPDFPKRSILQEFCHCQGWPFG 180

Query: 181 LCRKAVLLPPLPKSPSESWLWSKGTKIVKI 203
           L RKAVLLPPLPKSPSESW W KG +IVK+
Sbjct: 181 LWRKAVLLPPLPKSPSESWSWRKGARIVKM 207

[Close]

BLAST of Cp4.1LG11g01650.1 vs. TrEMBL
Match: B9R7F5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591260 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.5e-57
Identity = 124/211 (58.77%), Postives = 153/211 (72.51%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDVLCNCHNFSKPQPNSNAEDDYPTSDFDDEEEEIVS 60
           MGVF+ EDPP P +KC FLA ALKD   NC    +   +S  E+++PTSD DDE+E IVS
Sbjct: 1   MGVFHHEDPPTPPKKCKFLAAALKDAFSNCSTCRRLSISS-PEEEHPTSDIDDEQELIVS 60

Query: 61  EIRSRAMEKLRRKTN-LSDSFSWVFSPATKELYITSMEIEKIDEPGNEDNTGDE------ 120
            IRSRAMEK R ++  L+DSFSWVFSP T ELY+     ++ D+ G+++N  DE      
Sbjct: 61  AIRSRAMEKSRNRSFVLTDSFSWVFSPRTGELYLAPKIFQQKDDDGDDENNDDEDDEREE 120

Query: 121 FYSVQS-FLTCSSAATKEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQELFHCEGWPF 180
           F SV S F  CSSA +KEAF S++ NFSRCSSL+ +  + +D  RR+IL+E  HCEGWPF
Sbjct: 121 FLSVGSCFSCCSSALSKEAFVSMKTNFSRCSSLSDVLEI-KDFPRRSILEEFCHCEGWPF 180

Query: 181 GLCRKAVLLPPLPKSPSESWLWSKGTKIVKI 203
           GLCRKAVLLPPLPKSPSESW WSKG+KIVK+
Sbjct: 181 GLCRKAVLLPPLPKSPSESWSWSKGSKIVKM 209

[Close]

BLAST of Cp4.1LG11g01650.1 vs. TAIR10
Match: AT1G47410.1 (AT1G47410.1 unknown protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25
Identity = 67/171 (39.18%), Postives = 97/171 (56.73%), Query Frame = 1


Query: 42  EDDYPTSDFDDEEEEIVSEIRSRAMEKLRRKTNLS-DSFSWVFSPATKELYITSMEIEKI 101
           +D+ P  DFD + E +V EIRSRAMEKLR+K     +  ++ F        +   +IE  
Sbjct: 36  DDNKPIGDFDYDHEVVVFEIRSRAMEKLRKKRRTGMEGLTYKF--------VKEYDIE-- 95

Query: 102 DEPGNEDNTGDEFYSVQSFLT--CSSAATKEAFFSVEANFSRCSSLNGLNFLDE------ 161
                     +EF SV+S  +  C S  + E + + +  FSR SSL GL   ++      
Sbjct: 96  ----------NEFCSVRSSFSECCMSDISIEGYMTAKTEFSRSSSLKGLELENQWKMHYV 155

Query: 162 -DLKRRTILQELFHCEGWPFGLCRKAVLLPPLPKSPSESWLWSKGTKIVKI 203
            ++K+ +++QE  HC+GWPFGL RKA LLPPLPKSP+ESW W K T++  +
Sbjct: 156 NEIKKGSVIQEFCHCQGWPFGLGRKAALLPPLPKSPAESWSWRKPTRVTPV 186

[Close]

BLAST of Cp4.1LG11g01650.1 vs. NCBI nr
Match: gi|449470182|ref|XP_004152797.1| (PREDICTED: uncharacterized protein LOC101221028 [Cucumis sativus])

HSP 1 Score: 379.8 bits (974), Expect = 3.0e-102
Identity = 183/202 (90.59%), Postives = 189/202 (93.56%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKCFLAGALKDVLCNCHNFSKPQPNSNAEDDYPTSDFDDEEEEIVSE 60
           MGVFYQEDPPNPSRKCFLAGALKD  CNCH F KP P  N EDDYPTSDFDD EEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFRKPLPKFNDEDDYPTSDFDDTEEEIVSE 60

Query: 61  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKIDEPGNEDNTGDEFYSVQSFL 120
           IR+RAMEKL+RKTNLSDSFSWVFSPATKELYITSMEIEK+DE GNEDN GDEFYSV+SFL
Sbjct: 61  IRTRAMEKLKRKTNLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVRSFL 120

Query: 121 T-CSSAATKEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQELFHCEGWPFGLCRKAVL 180
           T CS+AAT EAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQE+FHCEGWPFGLCRKAVL
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 181 LPPLPKSPSESWLWSKGTKIVK 202
           LPPLPKSPSESWLWSKGTKIVK
Sbjct: 181 LPPLPKSPSESWLWSKGTKIVK 202

[Close]

BLAST of Cp4.1LG11g01650.1 vs. NCBI nr
Match: gi|659087790|ref|XP_008444637.1| (PREDICTED: uncharacterized protein LOC103487908 [Cucumis melo])

HSP 1 Score: 374.0 bits (959), Expect = 1.6e-100
Identity = 180/202 (89.11%), Postives = 186/202 (92.08%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKCFLAGALKDVLCNCHNFSKPQPNSNAEDDYPTSDFDDEEEEIVSE 60
           MGVFYQEDPPNPSRKCFLAG LKD  CNCH F KP P  N ED+YPTSDFDD EEEIVSE
Sbjct: 1   MGVFYQEDPPNPSRKCFLAGVLKDAFCNCHTFRKPLPKFNDEDEYPTSDFDDTEEEIVSE 60

Query: 61  IRSRAMEKLRRKTNLSDSFSWVFSPATKELYITSMEIEKIDEPGNEDNTGDEFYSVQSFL 120
           IR+RAMEKL+RK NLSDSFSWVFSPATKELYITSMEIEK+DE GNEDN GDEFYSVQSFL
Sbjct: 61  IRTRAMEKLKRKANLSDSFSWVFSPATKELYITSMEIEKMDESGNEDNMGDEFYSVQSFL 120

Query: 121 T-CSSAATKEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQELFHCEGWPFGLCRKAVL 180
           T CS+AAT EAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQE+FHCEGWPFGLCRKAVL
Sbjct: 121 TCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQEVFHCEGWPFGLCRKAVL 180

Query: 181 LPPLPKSPSESWLWSKGTKIVK 202
           LPPLPKSPSESW WSKGTKIVK
Sbjct: 181 LPPLPKSPSESWSWSKGTKIVK 202

[Close]

BLAST of Cp4.1LG11g01650.1 vs. NCBI nr
Match: gi|1009136424|ref|XP_015885517.1| (PREDICTED: uncharacterized protein LOC107420939 [Ziziphus jujuba])

HSP 1 Score: 246.9 bits (629), Expect = 3.0e-62
Identity = 126/207 (60.87%), Postives = 156/207 (75.36%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDVLCNCHNFSKPQPNSNAEDDYPTSDFDDEEEEIVS 60
           M +FY E+ P PS++C FLA  LKDV  NCH F      S  ++D P SDFDDE+E +VS
Sbjct: 1   MSIFYHEESPIPSKRCKFLAACLKDVFSNCHTFGDRVSTSIPDEDLPPSDFDDEQEVVVS 60

Query: 61  EIRSRAMEKLRRK-TNLSDSFSWVFSPATKELYITSMEIEKIDEPGNEDNTGDEFYSVQS 120
            IRSRAMEKLR+K  NL+DSFSWV+SP T+ELYIT   +E+ +E G     G+EF SV+S
Sbjct: 61  AIRSRAMEKLRKKPNNLTDSFSWVYSPITRELYITPKGVEQKEEDG-----GEEFVSVKS 120

Query: 121 FLTCS---SAATKEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQELFHCEGWPFGLCR 180
             +CS   SAA+++AF SV+ +FSR  SLNGL F+D   +RR+I+QEL HCEGWPFGLCR
Sbjct: 121 CFSCSCCSSAASRDAFLSVKTSFSRTPSLNGLEFID--FQRRSIIQELCHCEGWPFGLCR 180

Query: 181 KAVLLPPLPKSPSESWLWSKGTKIVKI 203
           KAVLLPPLPKSPSESW WSKGTKI+++
Sbjct: 181 KAVLLPPLPKSPSESWSWSKGTKIIRM 200

[Close]

BLAST of Cp4.1LG11g01650.1 vs. NCBI nr
Match: gi|590592490|ref|XP_007017295.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 236.9 bits (603), Expect = 3.1e-59
Identity = 122/210 (58.10%), Postives = 155/210 (73.81%), Query Frame = 1


Query: 1   MGVFYQEDPPNPSRKC-FLAGALKDVLCNCHNFSKPQPNSNAEDDYPTSDFDDEEEEIVS 60
           M VFYQE+ P  S++C FLA  LK+   NCH F     +S  E++YPTSD DDE E +VS
Sbjct: 1   MSVFYQEEQPRQSKRCKFLASVLKEAFSNCHAFGG---HSGPEEEYPTSDIDDESEVVVS 60

Query: 61  EIRSRAMEKLRRKTNLS-DSFSWVFSPATKELYITSMEIEKIDEPGNEDNTGDEFYSVQS 120
           EIRSRAMEK++R+ +L+ ++ SWVFSP+T EL+ITS   ++ D+  NED   +EF+SV S
Sbjct: 61  EIRSRAMEKMKRRPSLTAENISWVFSPSTGELFITSKHAKRRDKD-NEDEEREEFFSVGS 120

Query: 121 -FLTCSSAATKEAFFSVEANFSRCSSLNGLNFLD------EDLKRRTILQELFHCEGWPF 180
            F  CSSA ++EAF S +ANFSRCSSLN ++F D      +D +RR+I+QE  HCEGWPF
Sbjct: 121 CFSFCSSAVSREAFLSAKANFSRCSSLNKVDFPDFWKFDLQDFRRRSIIQEFCHCEGWPF 180

Query: 181 GLCRKAVLLPPLPKSPSESWLWSKGTKIVK 202
           GLCRKAVLLPPLPKSPSESW W KGT++ K
Sbjct: 181 GLCRKAVLLPPLPKSPSESWSWRKGTRLAK 206

[Close]

BLAST of Cp4.1LG11g01650.1 vs. NCBI nr
Match: gi|703082889|ref|XP_010092069.1| (hypothetical protein L484_003373 [Morus notabilis])

HSP 1 Score: 236.1 bits (601), Expect = 5.3e-59
Identity = 121/207 (58.45%), Postives = 155/207 (74.88%), Query Frame = 1


Query: 1   MGVFY-QEDPPNPSRKC-FLAGALKDVLCNCHNFSKPQPNSNAEDDYPTSDFDDEEEEIV 60
           M +FY +E+P NPS++C FLA  LKD   NCH+F      SN +++YPTSDFD+E+E +V
Sbjct: 1   MTIFYHEEEPTNPSKRCKFLAACLKDAFSNCHDFGGCLSTSNPDEEYPTSDFDEEQEVVV 60

Query: 61  SEIRSRAMEKLRRKTNL--SDSFSWVFSPATKELYITSMEIEKIDEPGNEDNTGDEFYSV 120
           S IRS A+EKLRRK  L  SDSFSWV+S  T+ELYIT   IE+ ++    D  G+EF SV
Sbjct: 61  SAIRSGALEKLRRKPVLLMSDSFSWVYSTVTRELYITPKGIEQKEDMNGVDCEGEEFLSV 120

Query: 121 QS-FLTCSSAATKEAFFSVEANFSRCSSLNGLNFLDEDLKRRTILQELFHCEGWPFGLCR 180
           +S F  CSSAA+++ F SV+++FSR SSLNG++   ++ +RR+I+QE  HCEGWPFGLCR
Sbjct: 121 KSCFSCCSSAASRDVFVSVKSSFSRSSSLNGVDL--KEFQRRSIIQEFCHCEGWPFGLCR 180

Query: 181 KAVLLPPLPKSPSESWLWSKGTKIVKI 203
           KAVLLPPLPKSPSESW W KGTK  K+
Sbjct: 181 KAVLLPPLPKSPSESWSWRKGTKTAKL 205

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g01650.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG11g01650.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRD5_CUCSA	2.1e-102	90.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360040 PE=4 SV=1	[more]
A0A061FAY9_THECC	2.2e-59	58.10	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_033876 PE=4 SV=1	[more]
W9QPV8_9ROSA	3.7e-59	58.45	Uncharacterized protein OS=Morus notabilis GN=L484_003373 PE=4 SV=1	[more]
B9GNX6_POPTR	2.0e-57	58.57	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12930g PE=4 SV=1	[more]
B9R7F5_RICCO	4.5e-57	58.77	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591260 PE=4 SV=1	[more]

BLAST of Cp4.1LG11g01650.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G47410.1	1.4e-25	39.18	unknown protein	[more]

BLAST of Cp4.1LG11g01650.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470182\|ref\|XP_004152797.1\|	3.0e-102	90.59	PREDICTED: uncharacterized protein LOC101221028 [Cucumis sativus]	[more]
gi\|659087790\|ref\|XP_008444637.1\|	1.6e-100	89.11	PREDICTED: uncharacterized protein LOC103487908 [Cucumis melo]	[more]
gi\|1009136424\|ref\|XP_015885517.1\|	3.0e-62	60.87	PREDICTED: uncharacterized protein LOC107420939 [Ziziphus jujuba]	[more]
gi\|590592490\|ref\|XP_007017295.1\|	3.1e-59	58.10	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|703082889\|ref\|XP_010092069.1\|	5.3e-59	58.45	hypothetical protein L484_003373 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG11g01650	Cp4.1LG11g01650	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g01650.1:five_prime_utr:001	Cp4.1LG11g01650.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g01650.1:cds:001	Cp4.1LG11g01650.1:cds:001	CDS
Cp4.1LG11g01650.1:cds:002	Cp4.1LG11g01650.1:cds:002	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g01650.1:three_prime_utr:001	Cp4.1LG11g01650.1:three_prime_utr:001	three_prime_UTR
Cp4.1LG11g01650.1:three_prime_utr:002	Cp4.1LG11g01650.1:three_prime_utr:002	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g01650.1	Cp4.1LG11g01650.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36324	FAMILY NOT NAMED	coord: 1..202 score: 7.8