Cp4.1LG08g09270.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGATTTAATTTGATTTTTTAGTCTTTTAAAATTTTAGAACGAGAGGTGGAAGGCTAGGAAAAATCAACCTTCAAAATTAAGCAAAATTCTTTTTTCCATTGCCAATTATACCCTCGTCTTCTTCACGCGCCGTTGGATTTAGCCCAATTTTGTCTGTTCCACTCATAACTCAAAACCTAAGACTAAACCAGAGAATTTGCTGCGGAACCAAACGAAACGAAAATCTTCCGAGCCAGTTTCAATCCACTATGGGCACTAGAGAAGTCTACGAACAGAAGCTAAGAAGGGGTAATCTCTACCATGAACCCACCATGAATCCAGGCCTCGGATCGCCTCGTTGTCCTCGCTGTTTCTCTCTTCTTAAACCCGATCCTGTATTTTTCTCCTCTTCTTCCATTTAAATCAGCATCTTATGTTTCTGTTTTCGAATTCGTGTTTGATTTGGTGTGTTTTTTTTGTGGTTGATTCAGGATAAAAGTGAATGGGCCATAAATCCTGTTCTCCATAGTACCACCGCAGTGGTGAGTTCCTCCTCACTTTCTAATTTTCCCATTTTGATTTCTTCTTGAAATTTCTGAATGCTTCTAGGTTTTTGATTCTCCAGCGATGAATTTGTACTCTATGTTGTGTTCTGTAAGTTAATCTGCTGTTGGATAGTTGATGGACGTTTCTGGATCAACAATTTCGAAGTTGAATTCTATCCAGTTCCTCCTATTATCAATTGGATTATCGTAAATGATAATAGGAAAGAAGTTTATGAATGCTTTTGTTATAAACATTGTGGTTTCCATGGCTTTTGCATATTCTTATACTGCCTTGATCAACAGGCAGGATCAGGTCTTGGTGGGTTGCTTAGTGCAGTTCATGCTTTCAATACGGGTAATCATAATGAACTTTCATAAATGTTTCATTTGATTTGCACAATTGCTTATCGTTTACTTTCATTACAGGGATCCCACACCTTCAAAATCATGTCAAGGGACCAAAGTGGCTTCCCTTTGTAATTGGGGTATGCCTTCTTATTAAATTATGAAATTGATTTTGTTCTTGTTGTTAATTATCATTGGAGTTGGGTGGATTACTTGATGCTTGTGAGTTGTGTTCCATCAACTGTTTATGTGACTTCCTTCCTTGTCTCTTTGTTGATAGGTGCCTGTCCTGTTATTGTGTTCTGGTGCCGGTGCTGCATTTGGAGGTATGTTAGCAAATTGTCTTTGCTGCTTATTCTCTCTTTAAGAAAAGATTTATGTTTCGTTGGTCGGTTGTTTTTCATTTATTTTAAAACAAAGTTGATTACTGCGTTGAAATACATGAATAAGGGAAGGATTAGAACCTACCTAGGAACTTTGAATGTGCCTCTCCACCTGAAAACTGGAAAAGAAGCTTGGAATTCCATTACTCTATCATGGGGCCTTGGCTTCATCAGGCTTTTATCTTTTTGATGGTTGACCTTTGGTCTTAGAGATGATTTAGTGAATTTGTGACTCTGTAAGTGAAAAGAATGTTCGCCCACTAACTAGATGCTCGTTCACGTATCACTCGTACTTGGGTGACATGCCTTCTACAATTGTCACCTTAAAGTGAATGAGAAGGTTGTCGCGTCCGAATCCATTTTACCCCTTCAAAACTGTAATAGCCCAAGCCCAAGCTCACCGCTAGTGTCCTCTTTCGGTTTTCCCTTTCGGGCTTCACCTCAAGGTTTTTAAAATGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCCCCTTTTCAACCGATGTGGGATCTCACAATCCACCCCCCTTCGGGGCCTAGCATCCTCGCTAGCACACCGCTTGGTGTCTGGCTCTGATACCATTTGTAACAGCCGAAGCTCATCGCTAGCAGATAGTGTCCTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTTAAGGTTTTTAAAACGCGTAGGCTAGAGAGAGGTTTCCACCCCCTATAAAAAATGCTTCATTCCCCTCTCCAACTGATGTGGGATCTCACAATCCACCCACCTTCGGAACTCAATGTCCTCGCTAGTACACCGCTCGGAGTCCACCCCCTTCAGGGCTTAGCATCCTTGTGGCATACTGCCCGGTCTTGGGCTCTGATACCATTTGTAACAGCTGAAGCCCATCGCTAGCAAATATTGTCCTCTTTGGGCTTTTCCTTTCGGGTTTCCCCTCAAGATTTTTAAAACGCGTTTTCTATGGAGAGGTTTCCACACCTTTATAAAGAATGCTTCGTTCCCCTCTCCAACCGATGTGAGATCTCACAAAAACACTAATGATAGGTCAAATACATTAGTTGCACCGTGCTAACATGTTAGTATTTTCTGATGCAAGGACATACGAACGAGTTTAGAATGAGACACTAGCACATTGAGTAGTCTTCCTCCTTCCTTTTTCAGCCCAATGAAAACAAAATCATTATATTAGGATGATTATAATGAAAGAAAGATTTTAAGACACTAATCACTTTCTTTGTTGCTTATTAACTGTGCAGGTTTTGCTCTTCCAAGATTTACTCAACTCACTGTAACATCCTACTATGCCACCTCCAGTGCTTCCCATTATGGAGTTTCGCTTCTCACTCGAAGAATTGAAGACAATCACACGTCTCGAACTCGGGCTCAATGATTTTCACAGGTCACATAAGTTCAAGTAAGCAATCTCCTTCCCTTTTCCTTTTTTTTTTTCTGCTGGAAATTTTGCAAAATCATGTTTGGCTGTAGATTTAGAACGTCTGATTTGTGCTTGCTTTTGGTAAGACACCTTATCATATATGTAAATTGCAGAGAGTATCCGTTTAGATACATTATGTGCAAATAATCATAACGTTATTGATTACAGTTGTGCGACTTCCAGCCACCAAGGCTGTTGAGAATTTTGTATTATGTTATTGACGATCATGAAAATTTACAGCGGTAATGTTATATATGTAGTAGTTTATTGAAAGCCATTTCTGCAACGGTGATGGATTGTTGGCTTTTTGAAGCACAAGCTGGGTCTCACGAGTTTATGCAGTAGTTTACGGTTGTGCAACTAATGTATTTGACCTGTCATTA AAGATTTAATTTGATTTTTTAGTCTTTTAAAATTTTAGAACGAGAGGTGGAAGGCTAGGAAAAATCAACCTTCAAAATTAAGCAAAATTCTTTTTTCCATTGCCAATTATACCCTCGTCTTCTTCACGCGCCGTTGGATTTAGCCCAATTTTGTCTGTTCCACTCATAACTCAAAACCTAAGACTAAACCAGAGAATTTGCTGCGGAACCAAACGAAACGAAAATCTTCCGAGCCAGTTTCAATCCACTATGGGCACTAGAGAAGTCTACGAACAGAAGCTAAGAAGGGGTAATCTCTACCATGAACCCACCATGAATCCAGGCCTCGGATCGCCTCGTTGTCCTCGCTGTTTCTCTCTTCTTAAACCCGATCCTGATAAAAGTGAATGGGCCATAAATCCTGTTCTCCATAGTACCACCGCAGTGGCAGGATCAGGTCTTGGTGGGTTGCTTAGTGCAGTTCATGCTTTCAATACGGGGATCCCACACCTTCAAAATCATGTCAAGGGACCAAAGTGGCTTCCCTTTGTAATTGGGGTGCCTGTCCTGTTATTGTGTTCTGGTGCCGGTGCTGCATTTGGAGGTTTTGCTCTTCCAAGATTTACTCAACTCACTGTAACATCCTACTATGCCACCTCCAGTGCTTCCCATTATGGAGTTTCGCTTCTCACTCGAAGAATTGAAGACAATCACACGTCTCGAACTCGGGCTCAATGATTTTCACAGGTCACATAAGTTCAAGTAAGCAATCTCCTTCCCTTTTCCTTTTTTTTTTTCTGCTGGAAATTTTGCAAAATCATGTTTGGCTGTAGATTTAGAACGTCTGATTTGTGCTTGCTTTTGGTAAGACACCTTATCATATATGTAAATTGCAGAGAGTATCCGTTTAGATACATTATGTGCAAATAATCATAACGTTATTGATTACAGTTGTGCGACTTCCAGCCACCAAGGCTGTTGAGAATTTTGTATTATGTTATTGACGATCATGAAAATTTACAGCGGTAATGTTATATATGTAGTAGTTTATTGAAAGCCATTTCTGCAACGGTGATGGATTGTTGGCTTTTTGAAGCACAAGCTGGGTCTCACGAGTTTATGCAGTAGTTTACGGTTGTGCAACTAATGTATTTGACCTGTCATTA ATGGGCACTAGAGAAGTCTACGAACAGAAGCTAAGAAGGGGTAATCTCTACCATGAACCCACCATGAATCCAGGCCTCGGATCGCCTCGTTGTCCTCGCTGTTTCTCTCTTCTTAAACCCGATCCTGATAAAAGTGAATGGGCCATAAATCCTGTTCTCCATAGTACCACCGCAGTGGCAGGATCAGGTCTTGGTGGGTTGCTTAGTGCAGTTCATGCTTTCAATACGGGGATCCCACACCTTCAAAATCATGTCAAGGGACCAAAGTGGCTTCCCTTTGTAATTGGGGTGCCTGTCCTGTTATTGTGTTCTGGTGCCGGTGCTGCATTTGGAGGTTTTGCTCTTCCAAGATTTACTCAACTCACTGTAACATCCTACTATGCCACCTCCAGTGCTTCCCATTATGGAGTTTCGCTTCTCACTCGAAGAATTGAAGACAATCACACGTCTCGAACTCGGGCTCAATGA MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDPDKSEWAINPVLHSTTAVAGSGLGGLLSAVHAFNTGIPHLQNHVKGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTSRTRAQ
BLAST of Cp4.1LG08g09270.1 vs. TrEMBL
Match: A0A0A0LEC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G798610 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 2.2e-80 Identity = 145/152 (95.39%), Postives = 147/152 (96.71%), Query Frame = 1
BLAST of Cp4.1LG08g09270.1 vs. TrEMBL
Match: M5WAS7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012706mg PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 1.7e-64 Identity = 118/155 (76.13%), Postives = 134/155 (86.45%), Query Frame = 1
BLAST of Cp4.1LG08g09270.1 vs. TrEMBL
Match: A0A059DID0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02392 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.6e-62 Identity = 114/150 (76.00%), Postives = 130/150 (86.67%), Query Frame = 1
BLAST of Cp4.1LG08g09270.1 vs. TrEMBL
Match: A0A022RJR2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015415mg PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 2.1e-62 Identity = 114/151 (75.50%), Postives = 129/151 (85.43%), Query Frame = 1
BLAST of Cp4.1LG08g09270.1 vs. TrEMBL
Match: B9SYV6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0042280 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 4.7e-62 Identity = 113/155 (72.90%), Postives = 131/155 (84.52%), Query Frame = 1
BLAST of Cp4.1LG08g09270.1 vs. TAIR10
Match: AT2G41945.3 (AT2G41945.3 unknown protein) HSP 1 Score: 197.2 bits (500), Expect = 7.4e-51 Identity = 105/193 (54.40%), Postives = 125/193 (64.77%), Query Frame = 1
BLAST of Cp4.1LG08g09270.1 vs. TAIR10
Match: AT5G18250.1 (AT5G18250.1 unknown protein) HSP 1 Score: 74.7 bits (182), Expect = 5.6e-14 Identity = 37/121 (30.58%), Postives = 64/121 (52.89%), Query Frame = 1
BLAST of Cp4.1LG08g09270.1 vs. TAIR10
Match: AT3G04040.1 (AT3G04040.1 unknown protein) HSP 1 Score: 74.7 bits (182), Expect = 5.6e-14 Identity = 35/104 (33.65%), Postives = 58/104 (55.77%), Query Frame = 1
BLAST of Cp4.1LG08g09270.1 vs. NCBI nr
Match: gi|778684697|ref|XP_011652076.1| (PREDICTED: uncharacterized protein LOC101220824 [Cucumis sativus]) HSP 1 Score: 306.2 bits (783), Expect = 3.2e-80 Identity = 145/152 (95.39%), Postives = 147/152 (96.71%), Query Frame = 1
BLAST of Cp4.1LG08g09270.1 vs. NCBI nr
Match: gi|659084686|ref|XP_008443017.1| (PREDICTED: uncharacterized protein LOC103486742 [Cucumis melo]) HSP 1 Score: 295.4 bits (755), Expect = 5.7e-77 Identity = 139/153 (90.85%), Postives = 145/153 (94.77%), Query Frame = 1
BLAST of Cp4.1LG08g09270.1 vs. NCBI nr
Match: gi|645271997|ref|XP_008241182.1| (PREDICTED: uncharacterized protein LOC103339628 [Prunus mume]) HSP 1 Score: 257.3 bits (656), Expect = 1.7e-65 Identity = 119/155 (76.77%), Postives = 135/155 (87.10%), Query Frame = 1
BLAST of Cp4.1LG08g09270.1 vs. NCBI nr
Match: gi|694412603|ref|XP_009334611.1| (PREDICTED: uncharacterized protein LOC103927415 isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 255.8 bits (652), Expect = 5.0e-65 Identity = 118/155 (76.13%), Postives = 136/155 (87.74%), Query Frame = 1
BLAST of Cp4.1LG08g09270.1 vs. NCBI nr
Match: gi|694429845|ref|XP_009342430.1| (PREDICTED: uncharacterized protein LOC103934416 [Pyrus x bretschneideri]) HSP 1 Score: 254.6 bits (649), Expect = 1.1e-64 Identity = 116/155 (74.84%), Postives = 137/155 (88.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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