Cp4.1LG07g09190.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTGAAGGCCATCTGGAATATCCACAGAAAAACCCGGAGACAAGAATCAAGGTCGTATCCTCTCCTCTACCCTTTATAAAGAATCAAACTCCCCAACACTCAGCCACTCACCACAGCACAAATCCACCAATGGCTTCTTCTTCTTCTTCTTCTTCCTACTCTCTCTTTGGCGTTTTCGCCATTGCCTTCCTCGTCTTCGTCTCCTCCCCTGTTCTCTCCTCCAAAGGTACACTTTCCTCTCCCTCTCTCATGCTTTTCTAGGTTCGTGTTTCTTTCAGTTTTTCATTTGGAAATTTCTTGTTGAAGGGTCACTAGTAGATACATGTATGAATAGATACACGTGTTGAAGGGTCACTAATAGATACATGTATGAGTAGATACACGTATGAATAGATACATGTGTTGAAGGGTCACTCGTAGATATATGACTAGATACATGTGTTGAAGGTCACTCGTAGATATATGACTAGATACATATGTTGAAGGGTCACTCGTAGATACATGTATGATTAGATACATGTGTTGAAGGGTCACTAGTAGATACATGTATGAATAGATACATGTGTTGAAGGGTCACTCGTAGATACATGTATGAATAGATACACGTGTTGAAGGGTCACTAGTAGATACATGTATGAGTAGATACATGTCTGAATAGATACATGTGTTGAAGGGTCACTCGTAGATACATGTATGACTAGATACATGTGTTGAAGGGTCACTAGTACATACATGTATGACTAGATATATGTGTTGAAGGGTCACTAGTAGATACATGTATAAATAGATACATGTGTTGAAGGATCACTAGTAGATATATGTATGAATAGATACATGTGTTGAAGGGTCGCTTGTACATGTATGAATAGATATATGTAGGTTCCATTAGTTCCTAATTAAATAGATGCATGACTTTTTGGATAATGAATGGTAACCGGGAATGTCCCAAATTACCTATATGTATGTTGGTATTGGTCGAAGAAGTAGAAAATCAATCAAGCATTCCTTCGTAGTTTTATAAAGTTCTCTTCTCTCCAAGAATTCTACCAAATTTCTCTGTTGTCACCGACATTTCTATATATATATATATCAGAATTTCTAACAGAACCAGAGCTGGGGATTGAAAAAACCCAGAAAAATGCATTTTTCTTTAGGAATTTATATGGAAATGACAGTCTGAGCATTGAAGCAATCAAAAACCTTCCAATTTTGGGAACATAACAATGAATTTGTTCCTTCATTGCTATCAATCTGTACAAAACTTGTAAGAATATCTTAGAGAATTGTTTTTTAATCCAATCTGATACAAAATACTTCTCTATTTCATAGGGATTGTTAGATGATCACGACTCTTTACAATGGTATGATATTGTCCACTTTGAGTATAAGCTCTTATGACTCTGCTTTGGGCTTCCAAAAGACTTCATACCAATAGAGATAGTATTCCTTGATATTATAAACCCATGATCATTCCCTCAAACAAAGTACGCCTCCCCTTAATCGAAGCTCGACTCCTTTTTCTTTTGGAGTCTTAGTCATTTTTTACTATGCCTTCGAGGAGGCTCGACTCTTTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTTACCAATCTATTGGCACGACTAAATTTAGGGCATGGCTCTGATACCATATTAGATCAACGCGACTCTCCACAATGACATGATATTGTCCAATTTGAGCATAAGCTCTCATGACTTTGTATTAGGCTTCCCCAAAAGGCCTCGTACCAATCGAGATAGTATTCCTTGATTCTAACTCATTATCATTCCCTAAATTAGCCGATGGGTGACTATATAAGTACTTCAAATGAAATTAAATCTTTTGATTAAGAAAATTAAAAACAAACAAACAAGCTCTTCAAACATGGAGGACAACAGTCTGCAAATGAATGCTCTGAAAAAAATTTGCCAATTACCTGACTGCAGTTGAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACCGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCTGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGAGCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGAGATTGTGAAAGTGTTCTCAGATTTGGCGCCAATGTTCGTTTCTTGGTTTGCAGTTTGTTTTGTATGTAAACGACGTCGTTTCATTTTGAAAGTGTAATTTGATTT CACTGAAGGCCATCTGGAATATCCACAGAAAAACCCGGAGACAAGAATCAAGGTCGTATCCTCTCCTCTACCCTTTATAAAGAATCAAACTCCCCAACACTCAGCCACTCACCACAGCACAAATCCACCAATGGCTTCTTCTTCTTCTTCTTCTTCCTACTCTCTCTTTGGCGTTTTCGCCATTGCCTTCCTCGTCTTCGTCTCCTCCCCTGTTCTCTCCTCCAAAGTTGAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACCGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCTGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGAGCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGAGATTGTGAAAGTGTTCTCAGATTTGGCGCCAATGTTCGTTTCTTGGTTTGCAGTTTGTTTTGTATGTAAACGACGTCGTTTCATTTTGAAAGTGTAATTTGATTT ATGGCTTCTTCTTCTTCTTCTTCTTCCTACTCTCTCTTTGGCGTTTTCGCCATTGCCTTCCTCGTCTTCGTCTCCTCCCCTGTTCTCTCCTCCAAAGTTGAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACCGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCTGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGAGCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGA MASSSSSSSYSLFGVFAIAFLVFVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL
BLAST of Cp4.1LG07g09190.1 vs. Swiss-Prot
Match: UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06035 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 4.5e-26 Identity = 62/157 (39.49%), Postives = 95/157 (60.51%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. Swiss-Prot
Match: UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana GN=At5g19250 PE=1 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.0e-22 Identity = 60/183 (32.79%), Postives = 106/183 (57.92%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. Swiss-Prot
Match: UGPI2_ARATH (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana GN=At5g19240 PE=2 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 3.2e-19 Identity = 58/167 (34.73%), Postives = 96/167 (57.49%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. TrEMBL
Match: A6YTC7_CUCME (GPI-anchored protein-like protein II OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 3.0e-53 Identity = 117/197 (59.39%), Postives = 149/197 (75.63%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. TrEMBL
Match: A0A0A0LLP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021670 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 7.8e-49 Identity = 97/166 (58.43%), Postives = 125/166 (75.30%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. TrEMBL
Match: W9S359_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002452 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 3.6e-38 Identity = 86/175 (49.14%), Postives = 123/175 (70.29%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. TrEMBL
Match: R0GDT2_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021431mg PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.1e-37 Identity = 87/189 (46.03%), Postives = 129/189 (68.25%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. TrEMBL
Match: V4KF37_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10023896mg PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.5e-36 Identity = 87/192 (45.31%), Postives = 128/192 (66.67%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. TAIR10
Match: AT1G54860.1 (AT1G54860.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 158.3 bits (399), Expect = 5.0e-39 Identity = 88/191 (46.07%), Postives = 129/191 (67.54%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. TAIR10
Match: AT3G06035.1 (AT3G06035.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 119.4 bits (298), Expect = 2.6e-27 Identity = 62/157 (39.49%), Postives = 95/157 (60.51%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. TAIR10
Match: AT5G19250.1 (AT5G19250.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 106.3 bits (264), Expect = 2.2e-23 Identity = 60/183 (32.79%), Postives = 106/183 (57.92%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. TAIR10
Match: AT5G19240.1 (AT5G19240.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 96.7 bits (239), Expect = 1.8e-20 Identity = 58/167 (34.73%), Postives = 96/167 (57.49%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. NCBI nr
Match: gi|778666768|ref|XP_011648805.1| (PREDICTED: uncharacterized GPI-anchored protein At3g06035-like [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 2.0e-53 Identity = 115/197 (58.38%), Postives = 147/197 (74.62%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. NCBI nr
Match: gi|659070384|ref|XP_008454814.1| (PREDICTED: uncharacterized GPI-anchored protein At3g06035 [Cucumis melo]) HSP 1 Score: 216.5 bits (550), Expect = 4.4e-53 Identity = 117/197 (59.39%), Postives = 149/197 (75.63%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. NCBI nr
Match: gi|700205777|gb|KGN60896.1| (hypothetical protein Csa_2G021670 [Cucumis sativus]) HSP 1 Score: 201.8 bits (512), Expect = 1.1e-48 Identity = 97/166 (58.43%), Postives = 125/166 (75.30%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. NCBI nr
Match: gi|703135332|ref|XP_010105845.1| (hypothetical protein L484_002452 [Morus notabilis]) HSP 1 Score: 166.4 bits (420), Expect = 5.2e-38 Identity = 86/175 (49.14%), Postives = 123/175 (70.29%), Query Frame = 1
BLAST of Cp4.1LG07g09190.1 vs. NCBI nr
Match: gi|565486799|ref|XP_006301039.1| (hypothetical protein CARUB_v10021431mg [Capsella rubella]) HSP 1 Score: 164.9 bits (416), Expect = 1.5e-37 Identity = 87/189 (46.03%), Postives = 129/189 (68.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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