Cp4.1LG07g07900.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAGCTTATTTTGTTGTAATTGCAATGTCGTCCTTAAAGAATGCGGTTCCTAAACGGCCTTACAAGGAGAGAGCTCAGCCGTAAGTGATAAGGCTTTTCATGTTACTGTTTTTATTGTGTGTGTGTGTGTGTGTTTTTTTTTTTTCACCTTTTATGGATGACGGATTTGTGTAATTGTTTAGGAATTTTCGGAAGAAATTTGGGCTTCTTGAGAAGCATAAAGACTATGTCGAGCGTGCTAAGGCTTATCATAAGAAGGAAGATACTTTACGGGTAATGTTTGAAATGCCTTTACCACGGAATTTACACAATATTCAGTTATTTATCGAATTCTGTCGACGTGTCCTTGATTTGGTTGTTTTGTATTTTTTGTGTTGATCAATTTTCAGAAACTTAAAGAGAAAGCAGCATTCAAGAATCCAGATGAGTTTTACTTTAAGATGATTAAGACGAGAACAGTTGACGGAGTCCATAGACCAGAGTAATCACTGTAGATGATTTCGAACAACGATTGATTTTGGTGCTTCTTTCTGTTTTCTTATGCCTCTTAATCCTTAAATATGTTGTAGGAGTCAAGTAAATAAGTATACTGCAGAGCAACTCATGTTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAGTGCAGAGTGAGAAAAGGGTGGGTTCTTAGCGAGGTTTTGTTTCTTTTATTGACTAGGATTCCTTTGAAGAACTTGTTGATTTATTAATTTATCTAATCTATCAACTCTGACTCTTCTTTACAGAAAATCGAAAAACTGACAGCCACGTTGCATTCGCTTGATAATCAGCCATCAAATAAGCATATTTACTTTGCTGAAGACAGGTTTGAGCACAACTTGAATCTTTTTCCACTTATCGTTCTTGGTCTGCAAATGGGCAAGACTAAGAGTTATTTGATAAACGCATCAAATAGTTATTGGTCTTCAAATGGGATAGACTAAGAGTTATTTGATAAACGCCTCAATTTTTCATAGTTATCTCTTACCATTTATCTTGTTACTTCAGTTTTCTTGAGGCTATAGTCATTATGGTTGTGACTTAGTGTAAATGCATCCTACCCTTCCATCACTATAGCTATGCCACTCTTTTAATCAATTGGAGAGCTCTTTGTAAATATCCTTTTGGGTTCTCCTCGTCTCTTGTAACTTCATTTGATCGGTGAAATTGTTTTTTATTCAATACTCTTCTTTTGGTTTCAAAGAAGAGCCTCAGGAATGCATTAACTTAAGATAAATATATACAAAAGAACATTTGATACTGTTGCCTAATGCATTCAACCTACTTATTTTGGATAAACTGGTAGACCTGACTCATTAGCTTCATGCTTATTCTAATGCAGTTAAGTTTTATTTTATTTTATTTTATTTTATTTATGTTTAATTGCTTATAAATCATTGTTGATTACTTGCAGGGAGGAGGCCAATGAAATTCAATCTCGCTCTTCCAAAGGTAGATCAGTGGCATCTTCTGAGGCAGTTCCGGACAGTATTAAAAGGTAGCATTATTACTGAGGATGCAGACAGCTGCATGTAAATCTTTTTTTTAGGATACTTTTAATTGTTTTGAAAAGATTAATCAAGCTTATGCAAAGGAGGCACCCCCCTAGGAGTTGACATAAATCCTCTTCGATTATGGTTGATTACAATGGTCAAATGAATTTCACAGGAAGCCTCAACGGGAACAAAATAATTTAGCTAACAAATAAACCTTTTCCCACTTACCCTCCATTGAATATTTTTTCCGCTCTTTGATGATCCCCTGTAGTATAGTTTTGGTTGCTTAATTGCAAGTGAACCATTGTGTTTCAACCTATGCAGTTATGATGAATTTACGTATGTTTGATTGAAAAGGAATGGCCATGGGTTTTAAAATTTTATGATGCAGCTGCGTACACTTGTTAATTTTAAGCAATTGGACAATTGGTATAGAATCATTAGCAACATCATGTGCATCGTTCAAATTGAAGTAATGTCAAAATTCTTGACATTGGATTTTTTCAGTTTGTGTGAGAATATTACTTAGAACTTCATGTTGGATGTCCGCAACTTATAAGCCTCACAATATTATTTAGGGCTGGAGTGTTGAATGGACGGTGTAAACAAAGATGTTTTATCACTTCCAGATTCTCCCATTATGAGTGTAATTGCGGGAATATATTTAGTTATGAGGCTTGAACACATACTTTATTCTGCACTGACGGTAAAGATTCTGCATGTTGAAGCATAGGTTTATTCCTCTCCTGTCCTCCAAAAAGTTCGTTCCTTTCTAGCCAAGTATTCCAAAGGAATTTCGGATAAGATCGAGCCAAATGATTTTAGGGCTAAACTTAATCTTCTATCAATTATCAGGTTCTATAACCGGTCATACATAATAATTATGATTTGAATCTTTAGAGGTTCAATTTCTTACTTGGCATATTTTACTCAGTAGACTGACAGTCTTTTTCAATGCATAAGATGTTACCTGATTTGTGTGTGGTTTCCTTCTTTTCTGAACACAGGAAAACCATTTCGTCTTACAAAGAACTGGAGGCAAGGAGGAGTAGAGTCAGTGAATTGGAGAAACTTTATATGGATATGACACTGCAACAGGAATTAATGGTACTTTTCTAATGTGATCGTAGCTGTGTCAGTTTCGTGGACGGGTAGATAGTGTATTAAAATGATTATTGAAACTGAAATGTGATACATGCTTATAACAGAAAAAGGGTCGCAAACGTAAACTCCGGGAAGATGAGCTCGCCAATCCAACTTCAAAACCTGTATACAAGTGGAGGGCAGAACGAAAGCGATAACAAAGGTCTAATGCTTTACAGTTTTGCTCGCTCTATATATGTTAGTGTTTTGTTTTCTAAAAAATTTTCTACATTAGCATCATCGGGTTTCCTAAGATTGTAGAAGTTCTTGATGTTGCATTGCAATGGGGCGCTGCTGGCACAATATCATTGTCAGTGGTGTGTTATTGCAATTTCTCTTAGTTTTTTTTTTCTTTTTTTTTTCTTTTTTGAATCTTTTGAACACTGTTTATCAATCAATTGATTGTTTTTCCTGATTGGGTTGTGTACTTAGACCATAACTATCAAGAATTGATTAATTTGAAAGGCTCAAAATCATCAAAATTGAAAAGGAAAATTACATTTGGAGTCCCATAGGTTAGATTGCATTTGATTCCCTGATTGTTTTTGAACTCAACAAGGAGATTTCTCATTTGTTTTGGGTTGAAGCGAAAGGGGAATTCCCCTTTGATTTCGTCTTTGTTTTAATGTGATTTCCTCCTCAATTTATCTTATTTATTTTATTTATTTTTATTTTATTTTATTGGAAGTGTGGGAAAGAATGTGAGAAGGGAAGTTAATTTAAGAATTAATAAATATTAAATCTGTTTTTATATTATCATTAAATTTTATTTGAAAATTTAGTAACAAAATTTCTTTCTAGACCCGTNGAAGACCTCCCTCGTTCTAGATCTAGAATGAAGTTTAGAATGAAGGAGGGAACTGTAGCAGCCCAAGCCCACCACTAATAGATCTTGTCCTCTTTGGGCTTTCCCCTCAAAGTTTTAGAACGCGTCTGCTGGAAGATTCCACACCCTTATAAGGAACGCTTCGTATGTGGGATCTCACAATCCGCTCCCCTTTGGGGGCCTAGCGTCCATGCTTGCACACCACCCTGTGTTTGTCTCTGATACCAATTGGAACGAAGCATTCTTTATATGGGCGTGGAAACCTCTCCCAACCAGACGCGTTTTAAAACCTTGAGGGAAGTCCAAAAGAGAAAAAACCCACAGAAGATAACATCGGCTAGCGGTGGACTTGGGTTGTTACATGAACTCTCCTCGAAGAAAAAGAAATAATATATTTTTTTAAATAAAAACCATTATTAACTGGAAAATTAACACTAAAATGAATAGAGGGAACAAAATGAAACCAAATTTAATATTCAGGAGTATACTTGTTGGGTTTGAAAACTCAGGAATACAAATGCAACCAAATCCAAGCCATGTTACTACTGAATACGTTTGTTTTCATTTCTCATTGCCTTTGTACTCCGGTGGTTGATTCTAGGATTTGGCTTTTTGTTTACAGTTCCTAGCCCAGGCAGATTTTGAAGAAGATGATGTAGTCAGTTATATATAAGTTCACAACTCGCAATATCCAAGGAGATGGATAATCACCTGTTGAATCGCTGTTTTCCCTGCTAAGTCCTTTGAGAAAACTAGGCTGAGATCACTGAGGAGACCAACATTCTGGTTCCTTGTGTTAGTTTTTGTCAAATTTTGTCTTCACAGCTTAATTAATTAAACATTCTACATTTCTTCTGGGGTATGAAGAATGTAATCTAATTATTGTTATATCGTTAATTTACTGAGTAATATAGTTTTGTTCATGAATTCTACTTTGCTGAGGGCTTGGCAGCCTCTTCTGTTTTACTTTGTTTATTCAAGATTTTGTTTATAGTTTATTTTATAGAATAAATAGTTGGCCTATGAACGTTTTTTAGGATGAAATATATACTTTTGCTCCG GGAAGCTTATTTTGTTGTAATTGCAATGTCGTCCTTAAAGAATGCGGTTCCTAAACGGCCTTACAAGGAGAGAGCTCAGCCGAATTTTCGGAAGAAATTTGGGCTTCTTGAGAAGCATAAAGACTATGTCGAGCGTGCTAAGGCTTATCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCATTCAAGAATCCAGATGAGTTTTACTTTAAGATGATTAAGACGAGAACAGTTGACGGAGTCCATAGACCAGAGAGTCAAGTAAATAAGTATACTGCAGAGCAACTCATGTTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAGTGCAGAGTGAGAAAAGGAAAATCGAAAAACTGACAGCCACGTTGCATTCGCTTGATAATCAGCCATCAAATAAGCATATTTACTTTGCTGAAGACAGGGAGGAGGCCAATGAAATTCAATCTCGCTCTTCCAAAGGTAGATCAGTGGCATCTTCTGAGGCAGTTCCGGACAGTATTAAAAGGAAAACCATTTCGTCTTACAAAGAACTGGAGGCAAGGAGGAGTAGAGTCAGTGAATTGGAGAAACTTTATATGGATATGACACTGCAACAGGAATTAATGAAAAAGGGTCGCAAACGTAAACTCCGGGAAGATGAGCTCGCCAATCCAACTTCAAAACCTGTATACAAGTGGAGGGCAGAACGAAAGCGATAACAAAGTTCCTAGCCCAGGCAGATTTTGAAGAAGATGATGTAGTCAGTTATATATAAGTTCACAACTCGCAATATCCAAGGAGATGGATAATCACCTGTTGAATCGCTGTTTTCCCTGCTAAGTCCTTTGAGAAAACTAGGCTGAGATCACTGAGGAGACCAACATTCTGGTTCCTTGTGTTAGTTTTTGTCAAATTTTGTCTTCACAGCTTAATTAATTAAACATTCTACATTTCTTCTGGGGTATGAAGAATGTAATCTAATTATTGTTATATCGTTAATTTACTGAGTAATATAGTTTTGTTCATGAATTCTACTTTGCTGAGGGCTTGGCAGCCTCTTCTGTTTTACTTTGTTTATTCAAGATTTTGTTTATAGTTTATTTTATAGAATAAATAGTTGGCCTATGAACGTTTTTTAGGATGAAATATATACTTTTGCTCCG ATGTCGTCCTTAAAGAATGCGGTTCCTAAACGGCCTTACAAGGAGAGAGCTCAGCCGAATTTTCGGAAGAAATTTGGGCTTCTTGAGAAGCATAAAGACTATGTCGAGCGTGCTAAGGCTTATCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCATTCAAGAATCCAGATGAGTTTTACTTTAAGATGATTAAGACGAGAACAGTTGACGGAGTCCATAGACCAGAGAGTCAAGTAAATAAGTATACTGCAGAGCAACTCATGTTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAGTGCAGAGTGAGAAAAGGAAAATCGAAAAACTGACAGCCACGTTGCATTCGCTTGATAATCAGCCATCAAATAAGCATATTTACTTTGCTGAAGACAGGGAGGAGGCCAATGAAATTCAATCTCGCTCTTCCAAAGGTAGATCAGTGGCATCTTCTGAGGCAGTTCCGGACAGTATTAAAAGGAAAACCATTTCGTCTTACAAAGAACTGGAGGCAAGGAGGAGTAGAGTCAGTGAATTGGAGAAACTTTATATGGATATGACACTGCAACAGGAATTAATGAAAAAGGGTCGCAAACGTAAACTCCGGGAAGATGAGCTCGCCAATCCAACTTCAAAACCTGTATACAAGTGGAGGGCAGAACGAAAGCGATAA MSSLKNAVPKRPYKERAQPNFRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMKKGRKRKLREDELANPTSKPVYKWRAERKR
BLAST of Cp4.1LG07g07900.1 vs. Swiss-Prot
Match: UTP11_ORYSJ (Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0810000 PE=2 SV=2) HSP 1 Score: 307.8 bits (787), Expect = 1.0e-82 Identity = 155/229 (67.69%), Postives = 191/229 (83.41%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. Swiss-Prot
Match: UTP11_ARATH (Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana GN=At3g60360 PE=1 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 6.6e-74 Identity = 141/229 (61.57%), Postives = 185/229 (80.79%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. Swiss-Prot
Match: UTP11_DICDI (Probable U3 small nucleolar RNA-associated protein 11 OS=Dictyostelium discoideum GN=utp11 PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 2.7e-27 Identity = 86/227 (37.89%), Postives = 132/227 (58.15%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. Swiss-Prot
Match: UTP11_MOUSE (Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus GN=Utp11 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 7.4e-25 Identity = 85/245 (34.69%), Postives = 134/245 (54.69%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. Swiss-Prot
Match: UTP11_RAT (Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus GN=Utp11 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.3e-24 Identity = 81/244 (33.20%), Postives = 133/244 (54.51%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. TrEMBL
Match: A0A0A0LKH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074140 PE=4 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 5.4e-107 Identity = 208/229 (90.83%), Postives = 221/229 (96.51%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. TrEMBL
Match: M5VL75_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010969mg PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 1.3e-92 Identity = 180/229 (78.60%), Postives = 208/229 (90.83%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. TrEMBL
Match: M5WIT3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010965mg PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 2.2e-92 Identity = 179/229 (78.17%), Postives = 207/229 (90.39%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. TrEMBL
Match: C5DB53_VITVI (U3 small nucleolar RNA-associated protein 11 OS=Vitis vinifera GN=VIT_08s0056g00160 PE=3 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 2.9e-92 Identity = 175/229 (76.42%), Postives = 208/229 (90.83%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. TrEMBL
Match: A5B5S2_VITVI (U3 small nucleolar RNA-associated protein 11 OS=Vitis vinifera GN=VITISV_023155 PE=3 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 3.8e-92 Identity = 175/229 (76.42%), Postives = 207/229 (90.39%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. TAIR10
Match: AT3G60360.1 (AT3G60360.1 embryo sac development arrest 14) HSP 1 Score: 278.5 bits (711), Expect = 3.7e-75 Identity = 141/229 (61.57%), Postives = 185/229 (80.79%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. NCBI nr
Match: gi|659082535|ref|XP_008441892.1| (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo]) HSP 1 Score: 398.7 bits (1023), Expect = 7.0e-108 Identity = 209/229 (91.27%), Postives = 223/229 (97.38%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. NCBI nr
Match: gi|449470253|ref|XP_004152832.1| (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativus]) HSP 1 Score: 395.2 bits (1014), Expect = 7.8e-107 Identity = 208/229 (90.83%), Postives = 221/229 (96.51%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. NCBI nr
Match: gi|659123034|ref|XP_008461455.1| (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo]) HSP 1 Score: 355.9 bits (912), Expect = 5.2e-95 Identity = 190/229 (82.97%), Postives = 206/229 (89.96%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. NCBI nr
Match: gi|595793327|ref|XP_007200412.1| (hypothetical protein PRUPE_ppa010969mg [Prunus persica]) HSP 1 Score: 347.4 bits (890), Expect = 1.9e-92 Identity = 180/229 (78.60%), Postives = 208/229 (90.83%), Query Frame = 1
BLAST of Cp4.1LG07g07900.1 vs. NCBI nr
Match: gi|595868212|ref|XP_007211987.1| (hypothetical protein PRUPE_ppa010965mg [Prunus persica]) HSP 1 Score: 346.7 bits (888), Expect = 3.2e-92 Identity = 179/229 (78.17%), Postives = 207/229 (90.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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