Cp4.1LG07g07540.1 (mRNA) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g07540.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG07 : 6493486 .. 6497601 (+)
Sequence length924
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAAAGAAGATCGAGGACATGCATGGATACAATCTCCAGATGGTGATTTATAAGAAATTAATAGATATTGATATGAACAAGAAAGATGGCCGTATGTTTTTTCAAATCAAGAATATATTTTTCGATTTCCTCACCCCAAACGAGAAGGAGATCTTGAATGATGCAAACGGAGTCATCGAAGTCAAGATTGTTGATGAGGCTCAAAGGGTGAGCCCCATGTTCTTGACCAAAGGCAAGATTAAAGAACATGATGTTTATCTTTTTACCACTCATTGGAATTCTTTTGTCGACAAAAATTGCTTGAAATTTGGCAACCTCATCCAACTTTGGAGTTTCAGAAGAGTTCGTCTCGTAGACATTGATAATGAAATATTCACCTCTGATCTTTACTTCGCGTTGAATACCATAGATGGCCGATGTATTCTTTAGAAGTGTTCTTGCGTAAATACTGGATAGGATCGGTAGTTTTCTGTAGATATTTTACAATTCGTAGATGTTTTCTTTAGATTGTTCTTGTGTAGGTACTTTTCTTTAGATATTTTATAATTTGTAGATGTTTTCTTTAGATGTGTTCTTGTGTAGGCTTCGTAGATTTTTTATAGAGTATAGGTCCGAATTCAAGAAATTATTCATTCTTAAATAAATGTCAATATCAGTAGTTTAATAGTTTTGATTATTTTGTCTCAATTATTTATATTTATAGCGATCTAAGATCAGGATTCGAAATCTGATGATCTTGACATTCTCTTATATCCCCTTCTAAGAGTGAAGATTAACAATGATGCGTTAATTATCTTGGGTAGACCATTCTTAAAAATTGCTAGAACATTTATGGATATCGTTAAGAGAACGATAATGCATAGAATGAGTGACCAACAAATAAAAGTGGAGGCATACTGGGAACTATGGGATAAGGTGTAATCTTAGGAACACGAGAATGAATGTTTGTCTCTGTTAAGGATATTTAGTAATAAATTATACTTTTCCCGTATATATTATATTTGATATTTTATTATAAGGCAAATATTAGATATGTGCCTTATTACCATAGATATCTTTCCATTTATTGTTATTTCCATTTATTACTATTTCCATATCCTTGTAATTTATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGTGGTGGATTAATCAAACATTCACAGTCTCGAATATCAACCATCGAATGCTAGGTGACTCACACCATTCTAGAACTAAGAGGATGATGAGTAAAGTTCCTAATGAAATAGTTTTATAGAGACTAAAATATGGACGAAAAAAATTAAGCTTAGGGATGTGATAACTCTCATTTGAATAGGTTTAAAACAACGAATTACAATTATTTTTATGTTAGAGTAACATAAAGGAGGGTTAGCATCTTTTGGAGAAGCGTCTTCTCTAAGGAGTTGAACGTCATCAAGAAGAATATCATGTTGCTATTGAAGAGAGGTGCATTTTGTTTTTGTAATTTATCAGTTTTTTTTTTCTTTATGCAAAAGGTTGTTGTTTTTGTAATTTAACATCCTCGAGTACTCTAGAAAGAATGAAGAACAACGTGTAATCTTGTAGTGCAATAGATGGGAGTATAACATGATAGCTATTAGAGCAAATTCTGGGTATTAGATGGAAATCAACATCCTCGATGGCTCTGGGAAGAGGAGGAGCAAAGACAAAACAAATTGTAATGATTTGTACATATTTAATGCAACATTTTAATACGGAATCGAGTTAAGTAATTTATATTAATATGCGGAATCAATAATTTACCAATTACTTGCTACTTGTGGTTATTTATACTTATCCATAATGTAAAGAAACTGAACAATATTTTAACCACATCACAAACAAAGTCAGCAGTGCCACACGTGAAACTCGACGATATAATTATCGATAATCTTCTTCCACTCCATGAGTACATATAAAAAGCATGGTGGAAGGCACGTCGACAATGGAAAACAACGACGGTTTTCACNTAAAAAAAAAAAAAAAAAAAGAAAGATCAAAGGTCAATTATCTTACGTTCGGTTGATCCATAAGTGTAATGTCCCACATTAGTTGAGAGGAGAACAAAGCACCCTTTATAAGGGTGTGGAAACCTTTTCCCAGCATATGCTTTAAAGCCCTGAGTGGAAGCTCGAAAGGGAAAGCCCAAAGAGAACAATATTTGCTAGCGGTGGATCTGGATCATTACAAATGGTATCAGAGCCAGACACTGGACGATGTGTCAGCCTTCTCGCTCTTCCTCGAAGGGGGATAGACATGAGGCGGTGTACCAGTAGCGGTGTACCAGTAAGGATACTGGCCCTAAAGGGGTAGATTTGGAGGGGTTCCACATCGATTGTAGAAACGAACGAGTGACAGCGAGGACGCTGGACCCGAAGGGGGTGGGTTGTTGGGGAGGAGAACAAAATACCATTTACAAGGGTGTGGAAATCTTTTGCGTTTTAAAGTCTCGAGGAAAACACGAGAGAGGACAATGGATCTGGGTCCTTACAATAAGACTACTTGCATGGATCTGGGTCAAGGAGGGTGTGGAAACCTTCACGGACTGGAAATTATAAACAAATCACACGACACTCCTCTGTCACGGTTAGATATACACACATATTCATCACTTACTCACCACGACACTCCTCTATCACGGTTAGATATACACACATATTCATAGCAAGGATTTCATACTTCCTAGTGGATCACCCTAAGGCACATAAATTAAGATGGATAGTTGCACCTATGTATTGATTTTCAAGAGTTAGAACAAGATGTCAATAAAAAATTCATTTTTACTTTGCCTTTCACGAAGGTTGACTCCTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTTACGAATCTATTGGCACGTCTAAGTCTAGGGCATGGCTATGATACTATATTAGATGAACCGAAAACATAGTGAATTGGCATGTCCGCCTTGAGTATGTCTAAGTCTATTGGCACGTCTAAGCCTATTGGCACATCGGCTTTGAGTATAAGCTCTCATGGCTTTGGTTTGGGCTTACCAAAAAGCCTCCTACCAATGGAGAGAGTATTATTAGATTATAAACCCATCAACATTCCCTAGATGAGCTCATGTGGTTCTTTCACCATCCAACATTCCGTTTCAATTTTTTCCTTAAAGGTTTTTAAAACCCTCTTTCTAGGGAGAGATTTCACACTCTTTTAAAAAATGTTTTCACAATCTACCCTTCTTCCGAGCCCAACGTCGTCACTGACACGCATTCCCTTCTCCAATCGATACCGGATCCCCCAATTCACCCCCTTGAGCCCCAGTACACGGTCTAATGTCTGACTCTGATACCATTTCTAACCACCGAAGCCCACTGCTAATCGATAGCGGTGGGCTTAGGCCATTACAAAAAGATTATGAGTAGAAGAACTCAACTCATAATTTGTAGTTAGAAGTTGTGGTCTTTACTTTAAAAATTTGAAGACATAAATTATATGGAGAAAAGATTCAAATCATCATAAACCATAACAAATTTGAAAGTATTACCATAGAAATTGAGTGAATCCAAGTAAACTATATATATTAGATGGTTTTTTCCATTCTCTTCTCACAATCTCTAACTTATATCAGTTTCTCCATATCCATCGATGTCAAATCGGCGTAATTCATTTTTTCTATTCACAAAGCCAGACATGCCAACTGAGATGCGAAAGCAGATCGAGGACATGCATGGATACAATCTCCAATTGGTGATTCATAAGAGATTAGTAGAATCTGATATGAACGAGAAAGGGCGTTTGTTTTTTCGAATCAAGAAAATGTTCTTCGATTTCCTCACCCCAAATGAGAAGGAGCTCTTGAATGATGCAAACGGTGTCATGGAAGTCAAGATTGTTGATGAGGCTCAAAGGGTGAGCCCCATGTTCTTGACCAAAGGCAAGATTAAAGACCAAGATGTTTATTTTTTTACCACTCATTGGAATTCTTTTGTCGAAAAAAATTGCTTGAAATTGGGCCACCTTATCCAACTTTGGAGTTTCAGAAGAGTTCGACTAGTAGACATCGAAAACGAAATATTCACCTCTGATCTTTACTTCGCTTTGAATACCGTCGATGGTCGATGTATTCTTTAG

mRNA sequence

ATGCGAAAGAAGATCGAGGACATGCATGGATACAATCTCCAGATGGTGATTTATAAGAAATTAATAGATATTGATATGAACAAGAAAGATGGCCGTATGTTTTTTCAAATCAAGAATATATTTTTCGATTTCCTCACCCCAAACGAGAAGGAGATCTTGAATGATGCAAACGGAGTCATCGAAGTCAAGATTGTTGATGAGGCTCAAAGGGTGAGCCCCATGTTCTTGACCAAAGGCAAGATTAAAGAACATGATGTTTATCTTTTTACCACTCATTGGAATTCTTTTGTCGACAAAAATTGCTTGAAATTTGGCAACCTCATCCAACTTTGGAGTTTCAGAAGAGTTCGTCTCGTAGACATTGATAATGAAATATTCACCTCTGATCTTTACTTCGCGTTGAATACCATAGATGGCCGATTTTCTCCATATCCATCGATGTCAAATCGGCGTAATTCATTTTTTCTATTCACAAAGCCAGACATGCCAACTGAGATGCGAAAGCAGATCGAGGACATGCATGGATACAATCTCCAATTGGTGATTCATAAGAGATTAGTAGAATCTGATATGAACGAGAAAGGGCGTTTGTTTTTTCGAATCAAGAAAATGTTCTTCGATTTCCTCACCCCAAATGAGAAGGAGCTCTTGAATGATGCAAACGGTGTCATGGAAGTCAAGATTGTTGATGAGGCTCAAAGGGTGAGCCCCATGTTCTTGACCAAAGGCAAGATTAAAGACCAAGATGTTTATTTTTTTACCACTCATTGGAATTCTTTTGTCGAAAAAAATTGCTTGAAATTGGGCCACCTTATCCAACTTTGGAGTTTCAGAAGAGTTCGACTAGTAGACATCGAAAACGAAATATTCACCTCTGATCTTTACTTCGCTTTGAATACCGTCGATGGTCGATGTATTCTTTAG

Coding sequence (CDS)

ATGCGAAAGAAGATCGAGGACATGCATGGATACAATCTCCAGATGGTGATTTATAAGAAATTAATAGATATTGATATGAACAAGAAAGATGGCCGTATGTTTTTTCAAATCAAGAATATATTTTTCGATTTCCTCACCCCAAACGAGAAGGAGATCTTGAATGATGCAAACGGAGTCATCGAAGTCAAGATTGTTGATGAGGCTCAAAGGGTGAGCCCCATGTTCTTGACCAAAGGCAAGATTAAAGAACATGATGTTTATCTTTTTACCACTCATTGGAATTCTTTTGTCGACAAAAATTGCTTGAAATTTGGCAACCTCATCCAACTTTGGAGTTTCAGAAGAGTTCGTCTCGTAGACATTGATAATGAAATATTCACCTCTGATCTTTACTTCGCGTTGAATACCATAGATGGCCGATTTTCTCCATATCCATCGATGTCAAATCGGCGTAATTCATTTTTTCTATTCACAAAGCCAGACATGCCAACTGAGATGCGAAAGCAGATCGAGGACATGCATGGATACAATCTCCAATTGGTGATTCATAAGAGATTAGTAGAATCTGATATGAACGAGAAAGGGCGTTTGTTTTTTCGAATCAAGAAAATGTTCTTCGATTTCCTCACCCCAAATGAGAAGGAGCTCTTGAATGATGCAAACGGTGTCATGGAAGTCAAGATTGTTGATGAGGCTCAAAGGGTGAGCCCCATGTTCTTGACCAAAGGCAAGATTAAAGACCAAGATGTTTATTTTTTTACCACTCATTGGAATTCTTTTGTCGAAAAAAATTGCTTGAAATTGGGCCACCTTATCCAACTTTGGAGTTTCAGAAGAGTTCGACTAGTAGACATCGAAAACGAAATATTCACCTCTGATCTTTACTTCGCTTTGAATACCGTCGATGGTCGATGTATTCTTTAG

Protein sequence

MRKKIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPNEKEILNDANGVIEVKIVDEAQRVSPMFLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLVDIDNEIFTSDLYFALNTIDGRFSPYPSMSNRRNSFFLFTKPDMPTEMRKQIEDMHGYNLQLVIHKRLVESDMNEKGRLFFRIKKMFFDFLTPNEKELLNDANGVMEVKIVDEAQRVSPMFLTKGKIKDQDVYFFTTHWNSFVEKNCLKLGHLIQLWSFRRVRLVDIENEIFTSDLYFALNTVDGRCIL
Homology
[Close]
BLAST of Cp4.1LG07g07540.1 vs. TrEMBL
Match: A0A0A0LRL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = 1 

Query: 160 PDMPTEMRKQIEDMHGYNLQLVIHKRLVESDMNEK-GRLFFRIKKMFFDFLTPNEKELLN 219
           P+MP  MR ++    GY +QLVI K+L ESD++   GRL    KK+  +F+   E+ +L 
Sbjct: 103 PEMPASMRDRVVGKGGYEIQLVIQKQLEESDVSRNHGRLCLPAKKVKTEFVREEERNILE 162

Query: 220 DANGV-------MEVKIVDEAQRVSPMFLTKGKIKDQDVYFFTTHWNSFVEKNCLKLGHL 279
           + N         +EV ++D++ R S M L K KI     Y    +WN FVE+N L+ G  
Sbjct: 163 EENDGKKKNKKGLEVGVMDDSLRESSMCLKKWKIGSGKFYCLMKNWNCFVEENGLRSGDY 222

[Close]
BLAST of Cp4.1LG07g07540.1 vs. TrEMBL
Match: A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.9e-14
Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 1 

Query: 159 KPDMPTEMRKQIEDMHGYNLQLVIHKRLVESDMNEK-GRLFFRIKKMFFDFLTPNEKELL 218
           +P MP  MR +I +M GY + LVI K+L ++D+N+  GRL    K++ FDF T  E +LL
Sbjct: 121 RPSMPVAMRDRILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLL 180

Query: 219 NDANGV----MEVKIVDEAQRVSPMFLTKGKIKDQDVYFFTTHWNSFVEKNCLKLGHLIQ 278
           ++        + V I+D+      + L K KI    VY   T WN  VE+  LK G  IQ
Sbjct: 181 SEQENKNKMGINVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQ 240

Query: 279 LWSFRR 280
           +WSFR+
Sbjct: 241 VWSFRK 246

[Close]
BLAST of Cp4.1LG07g07540.1 vs. TrEMBL
Match: A0A0A0KSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14
Identity = 53/138 (38.41%), Postives = 73/138 (52.90%), Query Frame = 1 

Query: 1   MRKKIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPNEKEILNDANGV- 60
           MR +I +M GY +++VI K+L D D+NK  GR     K + FDF T  E ++L++     
Sbjct: 131 MRDRILEMGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFATEEESKLLSEQENKN 190

Query: 61  ---IEVKIVDEAQRVSPMFLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRV 120
              I V I+D+A     + L K KI   +VY   T WN  V+K   K G  IQ+WSFR+ 
Sbjct: 191 KKGINVMILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGFKSGEEIQVWSFRK- 250

Query: 121 RLVDIDNEIFTSDLYFAL 135
                D+E     L FAL
Sbjct: 251 -----DDEYEAHRLCFAL 262

[Close]
BLAST of Cp4.1LG07g07540.1 vs. TrEMBL
Match: A0A0A0KUX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.2e-14
Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 1 

Query: 159 KPDMPTEMRKQIEDMHGYNLQLVIHKRLVESDMNEK-GRLFFRIKKMFFDFLTPNEKELL 218
           +P MP  MR +I +M GY + LVI K+L ++D+N+  GRL    K++ FDF T  E +LL
Sbjct: 105 RPSMPVAMRDRILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLL 164

Query: 219 NDANGV----MEVKIVDEAQRVSPMFLTKGKIKDQDVYFFTTHWNSFVEKNCLKLGHLIQ 278
           ++        + V  +D+      + L K KI    VY   T WN  VE+  LK G  IQ
Sbjct: 165 SEQENKNKMGINVMTLDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQ 224

Query: 279 LWSFRR 280
           +WSFR+
Sbjct: 225 VWSFRK 230

[Close]
BLAST of Cp4.1LG07g07540.1 vs. TrEMBL
Match: A0A0A0KPD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.0e-12
Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 1 

Query: 7   DMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPNEKEILNDANGV----IEV 66
           +M GY + +VI K+L D D+NK  GR+    K + FDF T  E ++L++        I V
Sbjct: 4   EMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGINV 63

Query: 67  KIVDEAQRVSPMFLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRR 116
            ++D+      + L K KI   +VY   T WN  V++  LK G  IQ+WSFR+
Sbjct: 64  MLLDDVLEERMLCLKKWKIGSGEVYCLMTKWNLMVEERGLKSGEEIQVWSFRK 116

[Close]
BLAST of Cp4.1LG07g07540.1 vs. NCBI nr
Match: gi|659072764|ref|XP_008467039.1| (PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 1.9e-15
Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 1 

Query: 160 PDMPTEMRKQIEDMHGYNLQLVIHKRLVESDMNE-KGRLFFRIKKMFFDFLTPNEKELLN 219
           P+MPT MR +IE+M GY + LVI K+L ++D+N+ +GRL    KK+ FDF T  E+ LL+
Sbjct: 103 PEMPTTMRDRIEEMGGYEINLVIQKQLTDTDLNKNEGRLSMPKKKLAFDFTTEEERNLLS 162

Query: 220 -----DANGVMEVKIVDEAQRVSPMFLTKGKI--KDQDVYFFTTHWNSFVEKNCLKLGHL 279
                +  G+  + + +  + +  + L K KI   + DVY   T WN+FVE+  LK G  
Sbjct: 163 QQENKNKKGINVMIMNNMVEDIRSICLKKWKIGSGNGDVYCLMTQWNAFVEETGLKSGQH 222

[Close]
BLAST of Cp4.1LG07g07540.1 vs. NCBI nr
Match: gi|700207532|gb|KGN62651.1| (hypothetical protein Csa_2G365090 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-14
Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = 1 

Query: 160 PDMPTEMRKQIEDMHGYNLQLVIHKRLVESDMNEK-GRLFFRIKKMFFDFLTPNEKELLN 219
           P+MP  MR ++    GY +QLVI K+L ESD++   GRL    KK+  +F+   E+ +L 
Sbjct: 103 PEMPASMRDRVVGKGGYEIQLVIQKQLEESDVSRNHGRLCLPAKKVKTEFVREEERNILE 162

Query: 220 DANGV-------MEVKIVDEAQRVSPMFLTKGKIKDQDVYFFTTHWNSFVEKNCLKLGHL 279
           + N         +EV ++D++ R S M L K KI     Y    +WN FVE+N L+ G  
Sbjct: 163 EENDGKKKNKKGLEVGVMDDSLRESSMCLKKWKIGSGKFYCLMKNWNCFVEENGLRSGDY 222

[Close]
BLAST of Cp4.1LG07g07540.1 vs. NCBI nr
Match: gi|659089541|ref|XP_008445565.1| (PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo])

HSP 1 Score: 88.2 bits (217), Expect = 2.7e-14
Identity = 53/149 (35.57%), Postives = 84/149 (56.38%), Query Frame = 1 

Query: 1   MRKKIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPNEKEILN------ 60
           +R +I+++ G+++Q V  K+L D DMNK  GR+    K +  DF +  EK++L       
Sbjct: 97  LRDRIDELDGFDIQYVTQKRLQDTDMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQED 156

Query: 61  --DANGVIEVKIVDEAQRVSPMFLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWS 120
             + NG+  V I+D   R   + L   K+ +HD Y   + WNSFV +N L+ G+ IQLWS
Sbjct: 157 LKNKNGMT-VLIIDPQLRNRHIELKMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWS 216

Query: 121 FR--RVRLVDIDNEI-FTSDLYFALNTID 139
           FR   + +V   +++   S+L FAL  +D
Sbjct: 217 FRSNNIFIVGHQSQVPVNSNLCFALVKLD 244

[Close]
BLAST of Cp4.1LG07g07540.1 vs. NCBI nr
Match: gi|778703844|ref|XP_011655441.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 2.7e-14
Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 1 

Query: 159 KPDMPTEMRKQIEDMHGYNLQLVIHKRLVESDMNEK-GRLFFRIKKMFFDFLTPNEKELL 218
           +P MP  MR +I +M GY + LVI K+L ++D+N+  GRL    K++ FDF T  E +LL
Sbjct: 121 RPSMPVAMRDRILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLL 180

Query: 219 NDANGV----MEVKIVDEAQRVSPMFLTKGKIKDQDVYFFTTHWNSFVEKNCLKLGHLIQ 278
           ++        + V I+D+      + L K KI    VY   T WN  VE+  LK G  IQ
Sbjct: 181 SEQENKNKMGINVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQ 240

Query: 279 LWSFRR 280
           +WSFR+
Sbjct: 241 VWSFRK 246

[Close]
BLAST of Cp4.1LG07g07540.1 vs. NCBI nr
Match: gi|700196320|gb|KGN51497.1| (hypothetical protein Csa_5G570420 [Cucumis sativus])

HSP 1 Score: 87.8 bits (216), Expect = 3.6e-14
Identity = 53/138 (38.41%), Postives = 73/138 (52.90%), Query Frame = 1 

Query: 1   MRKKIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPNEKEILNDANGV- 60
           MR +I +M GY +++VI K+L D D+NK  GR     K + FDF T  E ++L++     
Sbjct: 131 MRDRILEMGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFATEEESKLLSEQENKN 190

Query: 61  ---IEVKIVDEAQRVSPMFLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRV 120
              I V I+D+A     + L K KI   +VY   T WN  V+K   K G  IQ+WSFR+ 
Sbjct: 191 KKGINVMILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGFKSGEEIQVWSFRK- 250

Query: 121 RLVDIDNEIFTSDLYFAL 135
                D+E     L FAL
Sbjct: 251 -----DDEYEAHRLCFAL 262

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g07540.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG07g07540.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRL4_CUCSA1.5e-1440.16Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1[more]
A0A0A0KP87_CUCSA1.9e-1439.68Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1[more]
A0A0A0KSY8_CUCSA2.5e-1438.41Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1[more]
A0A0A0KUX9_CUCSA7.2e-1438.89Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1[more]
A0A0A0KPD7_CUCSA4.0e-1237.17Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1[more]
BLAST of Cp4.1LG07g07540.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG07g07540.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072764|ref|XP_008467039.1|1.9e-1541.41PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo][more]
gi|700207532|gb|KGN62651.1|2.1e-1440.16hypothetical protein Csa_2G365090 [Cucumis sativus][more]
gi|659089541|ref|XP_008445565.1|2.7e-1435.57PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo][more]
gi|778703844|ref|XP_011655441.1|2.7e-1439.68PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus][more]
gi|700196320|gb|KGN51497.1|3.6e-1438.41hypothetical protein Csa_5G570420 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR015300DNA-bd_pseudobarrel_sf
IPR005508DUF313
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG07g07540Cp4.1LG07g07540gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG07g07540.1:cds:001Cp4.1LG07g07540.1:cds:001CDS
Cp4.1LG07g07540.1:cds:002Cp4.1LG07g07540.1:cds:002CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG07g07540.1Cp4.1LG07g07540.1-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005508B3 domain-containing proteinPFAMPF03754DUF313coord: 3..99
score: 2.3E-7coord: 162..263
score: 3.
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 178..278
score: 9.
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 181..278
score: 9.42E-9coord: 53..114
score: 2.3
NoneNo IPR availablePANTHERPTHR31541FAMILY NOT NAMEDcoord: 146..302
score: 5.3
NoneNo IPR availablePANTHERPTHR31541:SF22SUBFAMILY NOT NAMEDcoord: 146..302
score: 5.3