Cp4.1LG07g00890.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCGCATCAACCAAACCACCACTCCCAAACGAATCCAACGGTTCAGATTCAGTTTAGTTTCTGCCCATTCCCTCTTGCTTTCTATATTCGCTTATTCTTCTTTCCTTTTCCTCTGGTTGTCTCTGTCTTTTTCGCATTTCTGCTCCATTTTTGCAGCTTTCTGAAACCATGTCTTCGTCCGAGAAGGAGAGAGAGACACAGGTCTACTTGGCCAAGCTCGCCGAGCAGGCCGAGCGCTATGACGGTATGGTCGCTATTCGCTTTTCTACTTCTCCTGCATTGTTTTTCTAATTTGTTTTGTGTTCTTTCCGATTTTTTATTCTGTTTGTTTTTCCGTGTTGTGTTGTGTTCCTTTTTTCTTTTGAGGTGCGATTTGATGAATATGTAGGGAATGATCTGTTGTTTTATTCTGGATTGTGATTTGTGTTCGTAAATGTGGACGGGAAATTGTTGATGTTGGTTTCTAGGTTCTTTGTTTCCTGTACGATTATCTTAGCGTTCGGCATTGCTTCTGATACCGAATTTTTGTTGTTGAAATGATAATTGATTTCGACCTCTTACTTCGCTTTTGTGTTTGAGAAAAGTTATCAATTATTGGATCTTCTGCATGATCGCTGTGTTAGATGCTCAATATTTATCTGATGCCTCGTTGATTTCTTTGAGTAATTTGAGGATGTTTCATATCTGTGAGGTGGAATTTTTTTTTCTTTATGGAGTTGATTCATTCATCCAATGATGCAGAAATGGTTGAGTGTATGAAGAATATTGCAAAGCTTGATCTCGAACTAACTGTGGAGGAGAGGAACCTTCTTTCTGTCGGGTACAAAAATGTCATAGGTGCACGACGAGCCTCTTGGCGCATCATGTCTTCAATTGAGCAGAAAGAGGAGTCCAAGGGAAATGAAAGCATTGTAAAATTGATAAAGGGTTACCGCCAGAAAGTAGAGGAGGAACTTTCAAAGATTTGTGGTGATATTCTCTGTATCATAGACAAGCATCTAATCCCCCATTCGTCCTCTGCAGAAGCCACTGTCTTCTACTACAAGATGTGAGTTGTTTCGTTACTATTAATTTCAAATTTGATCCTCAGCATATTTTTCTTCATTGGGTGAGTAATTTATATGTTTGGAACCTAGAAAGAAACAAAAAAACGGCTTGTTATACTCCGAATCCAAATGATACAGATTTAATACTAATGGAATTCTGTTGTCCTGTATTTCTTTTTGGGATATCAGTGGCTTTTGATCATACCCTGTACACCACGAGGAGACTTTACACACCCTAATGTTGGGGATATATGTTTTTATTCATTCTTAAAATCTGTGAGATAGGCCATAGATAGGTTGATGGTGAATACTGCTTGATGTTTCTATTATCTTGTCCGTCCTTTTCTGTAATAGTATATGTAATGTGTACAAATATGATCATAATGTGTTGTTTTAACAAATATTAGTATGCTGTTTGTAGTTACATGTCATAGCATGCATGATTTCAGGAAAGGTGACTACTTTCGCTATCTTGCTGAGTTCAAGACAGATCAAGATAGAAAAGAAGCTGCTGATCAGTCATTGAAGGGATATGAGGCATTTATTTTCTCTATAACATTCAAGCTCACATTAGAAATACAAAACATTAACTGTTTGCTTTTTCTAGATTAAAACATTGCCTCCTCTGCAATTATTTGAGGTGCTCTATTGCCATTTTTGTAACAGGCTGCCTCAAGTACTGCGAATACTGAACTCCCATCAACCCACCCCATCCGGCTTGGCCTTGCTCTCAATTTTTCTGTCTTCTACTACGAGATTATGAATTCTCCTGAGAGGTATTATTAAGCCTAGTTTTCAGTTATTGTATTAAGATTGAAAACCTTTACCCTCGTAATGTAATGAGATTCTTCTTGCAGAGCTTGCCATTTAGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGAGGAATCATACAAGGACAGCACTCTAATCATGCAACTGTTGAGAGACAACCTCACCCTCTGGACCTCAGATTTGCCTGAAGACGGCGGTATATGTCATAATTGATTCTAGAATAATGTCTTATTGTTTGTCCATATACATAGCATATCGTTCAGGATCTGCCATCCACAGTTTTTCGTTGATTCTCATATAACACTTAAATGCTGAATTTAACCATTATTGGTTGGCCTAGTCGTTAACAACCGGAGAATGGGTCAAGCTGTCAATCGACCTAGAATTTAAGATCATACCAATTATCTTGGCAACTAATAGGGTTAGATGATTATCTCATGAGAATAGTCAAGGTGCAAAAAAAAATCTACCCATGGATATTGAAAGAACATGTAGTTATCTTGGCAACTAAATATAGTAGGGTTAGATGATTTTCTCATTTGAGAATTTCTCGTACTGTCTCTATCTGATAAAAATTTCATCTGTTGTTGCACATCTACTAATTTATGAACGACATCAGGTGAAGAGAACGTCAAAGCTGAGGATTCCAAGCCTGTTGAACCTGAGGTAAGTCATTTGAAGTCCTTTCCTGTTTCAATCTTATAAATTCAGTTTCTACTTTCTATTACTCTTGATGACTTGAAACTGATTCATTACTTAGCCCCAGCAAGCGAAATGAGAGAGCCCCTCTACACATCATCTAGAGACGGATTTCTTTCCAAAGAGAATTTAAAGAATAGCTCTACGGTGTGGGATTGGACTGCACTATCAGATTTCTTGCGGCGTTTTTTTATTCATTTGGTCCAACTGAAGCTGGAGTTTTTTTTTTTTTTTTTCCAAGCTTTTGTTTCAAGTTCAAATTCAAATTCACCTCTTCTTTCATGTTGTTGATTCGTAAAACTAAGTGGATAATTGAATCATAACTATCATAGGTGCATATCTCTATTATTGTAATATGATAGTATCTATTATTGTAATATGATAGTATCGAATATATCCACATAAGATATGATCTATTAGACATTATCAAGCTAATTAGACATAAAATTAAAAGTTTAAAACCTATTGGACACCATTAAAAGTTTTAAGAATAACGATAGACCTTAATGAAGGGCCTAATTGAAATTGCCTAACTTATTAGGGGTGAAATTGACATT CGCGCATCAACCAAACCACCACTCCCAAACGAATCCAACGGTTCAGATTCAGTTTAGTTTCTGCCCATTCCCTCTTGCTTTCTATATTCGCTTATTCTTCTTTCCTTTTCCTCTGGTTGTCTCTGTCTTTTTCGCATTTCTGCTCCATTTTTGCAGCTTTCTGAAACCATGTCTTCGTCCGAGAAGGAGAGAGAGACACAGGTCTACTTGGCCAAGCTCGCCGAGCAGGCCGAGCGCTATGACGAAATGGTTGAGTGTATGAAGAATATTGCAAAGCTTGATCTCGAACTAACTGTGGAGGAGAGGAACCTTCTTTCTGTCGGGTACAAAAATGTCATAGGTGCACGACGAGCCTCTTGGCGCATCATGTCTTCAATTGAGCAGAAAGAGGAGTCCAAGGGAAATGAAAGCATTGTAAAATTGATAAAGGGTTACCGCCAGAAAGTAGAGGAGGAACTTTCAAAGATTTGTGGTGATATTCTCTGTATCATAGACAAGCATCTAATCCCCCATTCGTCCTCTGCAGAAGCCACTGTCTTCTACTACAAGATGAAAGGTGACTACTTTCGCTATCTTGCTGAGTTCAAGACAGATCAAGATAGAAAAGAAGCTGCTGATCAGTCATTGAAGGGATATGAGGCTGCCTCAAGTACTGCGAATACTGAACTCCCATCAACCCACCCCATCCGGCTTGGCCTTGCTCTCAATTTTTCTGTCTTCTACTACGAGATTATGAATTCTCCTGAGAGAGCTTGCCATTTAGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGAGGAATCATACAAGGACAGCACTCTAATCATGCAACTGTTGAGAGACAACCTCACCCTCTGGACCTCAGATTTGCCTGAAGACGGCGGTGAAGAGAACGTCAAAGCTGAGGATTCCAAGCCTGTTGAACCTGAGCCCCAGCAAGCGAAATGAGAGAGCCCCTCTACACATCATCTAGAGACGGATTTCTTTCCAAAGAGAATTTAAAGAATAGCTCTACGGTGTGGGATTGGACTGCACTATCAGATTTCTTGCGGCGTTTTTTTATTCATTTGGTCCAACTGAAGCTGGAGTTTTTTTTTTTTTTTTTCCAAGCTTTTGTTTCAAGTTCAAATTCAAATTCACCTCTTCTTTCATGTTGTTGATTCGTAAAACTAAGTGGATAATTGAATCATAACTATCATAGGTGCATATCTCTATTATTGTAATATGATAGTATCTATTATTGTAATATGATAGTATCGAATATATCCACATAAGATATGATCTATTAGACATTATCAAGCTAATTAGACATAAAATTAAAAGTTTAAAACCTATTGGACACCATTAAAAGTTTTAAGAATAACGATAGACCTTAATGAAGGGCCTAATTGAAATTGCCTAACTTATTAGGGGTGAAATTGACATT ATGTCTTCGTCCGAGAAGGAGAGAGAGACACAGGTCTACTTGGCCAAGCTCGCCGAGCAGGCCGAGCGCTATGACGAAATGGTTGAGTGTATGAAGAATATTGCAAAGCTTGATCTCGAACTAACTGTGGAGGAGAGGAACCTTCTTTCTGTCGGGTACAAAAATGTCATAGGTGCACGACGAGCCTCTTGGCGCATCATGTCTTCAATTGAGCAGAAAGAGGAGTCCAAGGGAAATGAAAGCATTGTAAAATTGATAAAGGGTTACCGCCAGAAAGTAGAGGAGGAACTTTCAAAGATTTGTGGTGATATTCTCTGTATCATAGACAAGCATCTAATCCCCCATTCGTCCTCTGCAGAAGCCACTGTCTTCTACTACAAGATGAAAGGTGACTACTTTCGCTATCTTGCTGAGTTCAAGACAGATCAAGATAGAAAAGAAGCTGCTGATCAGTCATTGAAGGGATATGAGGCTGCCTCAAGTACTGCGAATACTGAACTCCCATCAACCCACCCCATCCGGCTTGGCCTTGCTCTCAATTTTTCTGTCTTCTACTACGAGATTATGAATTCTCCTGAGAGAGCTTGCCATTTAGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGAGGAATCATACAAGGACAGCACTCTAATCATGCAACTGTTGAGAGACAACCTCACCCTCTGGACCTCAGATTTGCCTGAAGACGGCGGTGAAGAGAACGTCAAAGCTGAGGATTCCAAGCCTGTTGAACCTGAGCCCCAGCAAGCGAAATGA MSSSEKERETQVYLAKLAEQAERYDEMVECMKNIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESIVKLIKGYRQKVEEELSKICGDILCIIDKHLIPHSSSAEATVFYYKMKGDYFRYLAEFKTDQDRKEAADQSLKGYEAASSTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENVKAEDSKPVEPEPQQAK
BLAST of Cp4.1LG07g00890.1 vs. Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 1.2e-119 Identity = 220/262 (83.97%), Postives = 243/262 (92.75%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2) HSP 1 Score: 386.7 bits (992), Expect = 2.0e-106 Identity = 197/243 (81.07%), Postives = 224/243 (92.18%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=2) HSP 1 Score: 383.3 bits (983), Expect = 2.2e-105 Identity = 197/243 (81.07%), Postives = 220/243 (90.53%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 1.1e-104 Identity = 193/246 (78.46%), Postives = 219/246 (89.02%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 4.2e-104 Identity = 188/241 (78.01%), Postives = 218/241 (90.46%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. TrEMBL
Match: A0A0A0KD78_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366480 PE=3 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 1.6e-134 Identity = 250/264 (94.70%), Postives = 258/264 (97.73%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. TrEMBL
Match: M5Y8N0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020788mg PE=3 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 2.1e-126 Identity = 235/258 (91.09%), Postives = 247/258 (95.74%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. TrEMBL
Match: A0A0S3T2T3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G050800 PE=3 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 7.8e-126 Identity = 232/257 (90.27%), Postives = 249/257 (96.89%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. TrEMBL
Match: A0A0A0KU77_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606630 PE=3 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 7.8e-126 Identity = 236/263 (89.73%), Postives = 249/263 (94.68%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. TrEMBL
Match: A0A0L9VDM4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g176700 PE=3 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 7.8e-126 Identity = 232/257 (90.27%), Postives = 249/257 (96.89%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. TAIR10
Match: AT1G26480.1 (AT1G26480.1 general regulatory factor 12) HSP 1 Score: 430.6 bits (1106), Expect = 6.8e-121 Identity = 220/262 (83.97%), Postives = 243/262 (92.75%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. TAIR10
Match: AT1G34760.1 (AT1G34760.1 general regulatory factor 11) HSP 1 Score: 383.3 bits (983), Expect = 1.2e-106 Identity = 197/243 (81.07%), Postives = 220/243 (90.53%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. TAIR10
Match: AT1G22300.1 (AT1G22300.1 general regulatory factor 10) HSP 1 Score: 366.3 bits (939), Expect = 1.6e-101 Identity = 184/248 (74.19%), Postives = 216/248 (87.10%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. TAIR10
Match: AT2G42590.3 (AT2G42590.3 general regulatory factor 9) HSP 1 Score: 363.6 bits (932), Expect = 1.0e-100 Identity = 186/250 (74.40%), Postives = 217/250 (86.80%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. TAIR10
Match: AT5G38480.1 (AT5G38480.1 general regulatory factor 3) HSP 1 Score: 335.9 bits (860), Expect = 2.3e-92 Identity = 181/250 (72.40%), Postives = 209/250 (83.60%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. NCBI nr
Match: gi|449452855|ref|XP_004144174.1| (PREDICTED: 14-3-3-like protein GF14 iota isoform X2 [Cucumis sativus]) HSP 1 Score: 486.9 bits (1252), Expect = 2.3e-134 Identity = 250/264 (94.70%), Postives = 258/264 (97.73%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. NCBI nr
Match: gi|659089336|ref|XP_008445452.1| (PREDICTED: 14-3-3-like protein GF14 iota [Cucumis melo]) HSP 1 Score: 484.6 bits (1246), Expect = 1.1e-133 Identity = 250/264 (94.70%), Postives = 257/264 (97.35%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. NCBI nr
Match: gi|778715446|ref|XP_011657402.1| (PREDICTED: 14-3-3-like protein GF14 iota isoform X1 [Cucumis sativus]) HSP 1 Score: 483.0 bits (1242), Expect = 3.3e-133 Identity = 248/262 (94.66%), Postives = 256/262 (97.71%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. NCBI nr
Match: gi|645229510|ref|XP_008221499.1| (PREDICTED: 14-3-3-like protein GF14 iota [Prunus mume]) HSP 1 Score: 459.9 bits (1182), Expect = 3.0e-126 Identity = 235/258 (91.09%), Postives = 247/258 (95.74%), Query Frame = 1
BLAST of Cp4.1LG07g00890.1 vs. NCBI nr
Match: gi|596296462|ref|XP_007227176.1| (hypothetical protein PRUPE_ppa020788mg, partial [Prunus persica]) HSP 1 Score: 459.9 bits (1182), Expect = 3.0e-126 Identity = 235/258 (91.09%), Postives = 247/258 (95.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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