Cp4.1LG05g13970.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTATTTTTCAATCGCCAAAACAAATTCATTTCCAATTGAGAAATTCATCGAAGAAGAAAAAAAAGAAGTGACTTTTGTCTCTGATCGGAGATCCTCGCCGACGGCCGGCGGTTTACTGCCGGAGAGTGAATGTGCCGACGATAATTTCACAACCACCGATGACTCCGAAGTGGGGTGGGGGGCTTTCGACCGGTTTATGGCGAAAACCCTAGACCAGTCCGATGAGGGTTCGATTTCCGACGAGGAAAGTTTGATTGAGATCTCTCTCCCGACCGGTCATTACGTCAGCCACGAGTTCGAGGACGAGGAAGAGGAAGAAGAGGACGACATGTCGTCTTGTTACCGGGAGCTACCGGAATTTGAGAAGCAGAGGAAGAATCTTATGGAGCTGTTGGCTGAAATTAACGACATCAATGAGGAGGAGAATTTGATCGAGATCGACATATCTATGGGCTCCATTAAGTATTCAAGGTTTGAAATTGAAGCAAGGAAGTAA ATGCTTTATTTTTCAATCGCCAAAACAAATTCATTTCCAATTGAGAAATTCATCGAAGAAGAAAAAAAAGAAGTGACTTTTGTCTCTGATCGGAGATCCTCGCCGACGGCCGGCGGTTTACTGCCGGAGAGTGAATGTGCCGACGATAATTTCACAACCACCGATGACTCCGAAGTGGGGTGGGGGGCTTTCGACCGGTTTATGGCGAAAACCCTAGACCAGTCCGATGAGGGTTCGATTTCCGACGAGGAAAGTTTGATTGAGATCTCTCTCCCGACCGGTCATTACGTCAGCCACGAGTTCGAGGACGAGGAAGAGGAAGAAGAGGACGACATGTCGTCTTGTTACCGGGAGCTACCGGAATTTGAGAAGCAGAGGAAGAATCTTATGGAGCTGTTGGCTGAAATTAACGACATCAATGAGGAGGAGAATTTGATCGAGATCGACATATCTATGGGCTCCATTAAGTATTCAAGGTTTGAAATTGAAGCAAGGAAGTAA ATGCTTTATTTTTCAATCGCCAAAACAAATTCATTTCCAATTGAGAAATTCATCGAAGAAGAAAAAAAAGAAGTGACTTTTGTCTCTGATCGGAGATCCTCGCCGACGGCCGGCGGTTTACTGCCGGAGAGTGAATGTGCCGACGATAATTTCACAACCACCGATGACTCCGAAGTGGGGTGGGGGGCTTTCGACCGGTTTATGGCGAAAACCCTAGACCAGTCCGATGAGGGTTCGATTTCCGACGAGGAAAGTTTGATTGAGATCTCTCTCCCGACCGGTCATTACGTCAGCCACGAGTTCGAGGACGAGGAAGAGGAAGAAGAGGACGACATGTCGTCTTGTTACCGGGAGCTACCGGAATTTGAGAAGCAGAGGAAGAATCTTATGGAGCTGTTGGCTGAAATTAACGACATCAATGAGGAGGAGAATTTGATCGAGATCGACATATCTATGGGCTCCATTAAGTATTCAAGGTTTGAAATTGAAGCAAGGAAGTAA MLYFSIAKTNSFPIEKFIEEEKKEVTFVSDRRSSPTAGGLLPESECADDNFTTTDDSEVGWGAFDRFMAKTLDQSDEGSISDEESLIEISLPTGHYVSHEFEDEEEEEEDDMSSCYRELPEFEKQRKNLMELLAEINDINEEENLIEIDISMGSIKYSRFEIEARK
BLAST of Cp4.1LG05g13970.1 vs. TrEMBL
Match: A0A0A0KCP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G112470 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47 Identity = 115/176 (65.34%), Postives = 138/176 (78.41%), Query Frame = 1
BLAST of Cp4.1LG05g13970.1 vs. TrEMBL
Match: A0A061DM67_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002409 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.0e-22 Identity = 73/129 (56.59%), Postives = 91/129 (70.54%), Query Frame = 1
BLAST of Cp4.1LG05g13970.1 vs. TrEMBL
Match: B9SW40_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0346450 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 6.6e-22 Identity = 72/127 (56.69%), Postives = 92/127 (72.44%), Query Frame = 1
BLAST of Cp4.1LG05g13970.1 vs. TrEMBL
Match: A0A067K124_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18500 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.1e-21 Identity = 81/174 (46.55%), Postives = 106/174 (60.92%), Query Frame = 1
BLAST of Cp4.1LG05g13970.1 vs. TrEMBL
Match: W9RVQ6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014260 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 6.2e-20 Identity = 76/157 (48.41%), Postives = 96/157 (61.15%), Query Frame = 1
BLAST of Cp4.1LG05g13970.1 vs. TAIR10
Match: AT2G04480.1 (AT2G04480.1 unknown protein) HSP 1 Score: 84.7 bits (208), Expect = 5.7e-17 Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 1
BLAST of Cp4.1LG05g13970.1 vs. TAIR10
Match: AT5G35870.1 (AT5G35870.1 unknown protein) HSP 1 Score: 70.9 bits (172), Expect = 8.6e-13 Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 1
BLAST of Cp4.1LG05g13970.1 vs. NCBI nr
Match: gi|778712376|ref|XP_011656887.1| (PREDICTED: uncharacterized protein LOC105435780 [Cucumis sativus]) HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47 Identity = 115/176 (65.34%), Postives = 138/176 (78.41%), Query Frame = 1
BLAST of Cp4.1LG05g13970.1 vs. NCBI nr
Match: gi|700191405|gb|KGN46609.1| (hypothetical protein Csa_6G112470 [Cucumis sativus]) HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47 Identity = 115/176 (65.34%), Postives = 138/176 (78.41%), Query Frame = 1
BLAST of Cp4.1LG05g13970.1 vs. NCBI nr
Match: gi|659128354|ref|XP_008464163.1| (PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo]) HSP 1 Score: 196.8 bits (499), Expect = 2.9e-47 Identity = 113/179 (63.13%), Postives = 140/179 (78.21%), Query Frame = 1
BLAST of Cp4.1LG05g13970.1 vs. NCBI nr
Match: gi|1000944822|ref|XP_015581495.1| (PREDICTED: uncharacterized protein LOC8264016 [Ricinus communis]) HSP 1 Score: 116.3 bits (290), Expect = 5.1e-23 Identity = 79/153 (51.63%), Postives = 107/153 (69.93%), Query Frame = 1
BLAST of Cp4.1LG05g13970.1 vs. NCBI nr
Match: gi|590712352|ref|XP_007049365.1| (Uncharacterized protein TCM_002409 [Theobroma cacao]) HSP 1 Score: 113.2 bits (282), Expect = 4.3e-22 Identity = 73/129 (56.59%), Postives = 91/129 (70.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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