Cp4.1LG05g12440.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGATTATTTTATTTTATTTTATCTAAAAAAAGGGAGTGAAAATGACTGCAACTGTACTGGAAAGGGACCAAGCTGGGAGGGTATACTAAAAGGAAGAAGAGCTCAATGAAAATAGGAATTCGCGTCTTCAATCTTCTAATTAAATTCAACAAGCTGTCCACGAGCTTCATCGATTTTTGAACAAACCCCATCTGCCTTTGCAAATTTCCCCTCGTTTTCCCCTTTCTTTACTGTCCTCTTCGTCAAAAGGACTCTGGTTCTCTGCATTTCCAGTCGCCCACACGCTCCATCGCCCCCTTTGGGACCTCTGGAAATGGCTGCCATGCTTCTGCTGCTCTCTGGTTTCTCCATTTTCACTCTCTGATGGCTGTTTTTGGGGCTACGAAAAGGTATGTTCATGGGTTTTGATTGTTTCTTGCTTTTGACAAATGGGTTTCTCTTAACTTTTCTGAATTTCTGGGTTTCTTCTGAATCTGATCTGGTTTTGTTTTGTGGAGTTTGTGTGTTGTGGTTTTTCCACTTGGGTTCTGCTTGTTTTCGTTTTTTTGTTGAAATGTGAAGCTTATCTAATGCACCCACCACTTGATTTCTTTGCTAATCTGTTGTTCTTGAACGGTTAGGATTCACAGATCTCTACAATTGTATGATATTATCCACTTTGGTGTATTTCTTACTTATAAACCCATGATCATTCTTTAAATGAGCCAATGTAGGACTCCCTCCTAACGACTCTCCCCTCGAACAAAGTATAATATACAGTCTCCTTGAGGTCTATGGAGCCCTTGAACAGCCTCCCCTCAATCGAGGCTCGACTACTTCTCTAGAGCTCTCGAACAAAGTACACTCAAGAGTTTGACTTCATAGCTTGGATCTTGACATAATCTGGTTGGATTTGGAATCATTATGTGGAAGTTATGATGAATTTCGTAATGAATCATTCAGCATTCTTTAGCAGTGGATTTGAGTTTGAATGTTTATGTTTCCTTTACTTTTCATTTATATGGTCTGGCTTTGCTTGTGGAACTATACAAGGAATCTTGTGTTGAAAGATCCAAAAAGGGTTGAAAGATGGAGCTGAATTTGCCACTGGAGGGGACTACTTAGATTTCCTCTAGTTTTCTTGGATCTACAGAGACCTTAGTCATGTCCTAGGTAGATAGTCGACCCGACATTGAAGTTCGAATAACCCAATTGACGGGACGGGGGCGTATAGGATCATAGAGACCTTGAGACATTATTAGATCTCAAGAAAAAGTGAATGCTATAGCCTAATTGTAATGACCCAAACCTACCGCTAGTAGATATTGTCTTCTTTGGGTTTTCCCTTTCGGGATTTCCCTCAAAGTTTTTAAAACGCCTCTACTAGGGAGAGGTTTCCATACCTTATAAAAAAAATGCTTCGTTCTCCTCCTCAACCGGGGTCATATAGGACAATGGAATGGGCAAAAGATCATAGAGAGCTTGAGACGTCATTAGATCTCAAGAAAAAGTGAATGCAATAGCCTAATTGTAATGACCCAAGCCCACCGCTAGTCGATATTGTCCTTTTTGGACTTTCCCTTTCGGGGTTTCCCTCATGGTCTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGCTCTCCTCCCCAACCGATGTGTGATCTTACACTAATTATTAAAGAAGAAAGAACAGTAGAATTATACTTTGTGGCACTAGCTTTCCCTTGAAGGAAAAGGGCTCCTTGGGGCTTGCCGAGATAGACCGAAAACGTCGGTCACGAGTCGTATGAATTAGGTTATACTACTATGTAGCCGTCTGTGGTGTCTTTTCTGTCATGATTTCATACTTTGATAAAGAAATGAACTCAATATTATAACTTAATGAAGTAAAGTGTGTGCATATGTTTCCAGAATTTACAGGCGGAGACTAAGAGCCAATTGATTCCTGGCTTCACTATCAACCATGAAAGGAGGATCAGAGAATGGATGGCATTACTTTAAGTCTCTTCATTTTAGAGGTAAACCAGCCAACAATTTGTGCTTACTTCAGACCTCTGCCAGTACTCCGGGCGAAACTCCGGTCTATCTCAACGTGTATGACTTAACACCTGCAAATGGCTACATCTACTGGGCTGGTCTCGGCATCTTTCACTCCGGCATAGAAGGTTGGTTAGTTTACTTCTCTTTCGTTCGTATATCTAAATCGTGAACGATGATTTTGTTCTCACTTTTTTGGACAAAGGATCTGTGTTGATCTTGTAGATGTTCTTAAGATTATGTTATATAAGTTGTAGCCATAAGTTATTATTTGTGTTAACAGTTTACGGGGTTGAATATGCGTTTGGAGCCCACGACTATCCTACGAGTGGTATCTTTGAGGTCGAACCTCGGACATGCCCTGGATTCAAGTTTAGGAAGTCGATTTATATCGGTACGACCTGCTTGGACCCAATCCAAGTAAGAGACTTTATGGAGTGTGAAGCTGCAAACTATCATGGCGATTCGTATCACTTGATCGTGAAGAATTGCAACCATTTCTGTGAGGATATATGCAGAAAGCTAACTGGGAAACGCATACCGAAATGGATAAATCGGCTTGCGAGATTAGGTACGTGCATCGTCGTTTCCCTTGTCCAGAATACTTACGATTTCATGCTAGATCCTATGTGATTTTAAACCAGAAACACTCTTTGCAGGTTCCAAATGCAACTGCATACTCCCGAAAGCTCTCAAGGCCACAACCGTGCAACACGACCCGGGATTTGAGGGACAGGACAGCGAAAAGAAAAGACTAAGAAGCGGTTTCGGTTGCTTATCCTCAATCTCTATGAATCAGAAGGAAGTTTCAATATCTTCACTGTTTCTACACTCTCACTATAAAGGCTGCCTACCTCCATGGGAACTGAAACGATCCAAAAGTTGGTCGTTCAAGTAAGGGGAAGATGACTTACCTCAATCCGAACTTTCTTACGAGGTTTGTTCTTCGAGTTCTCGAGATAATAGCCATGGGAGCTGACTGGTCTGAGGTTTGAGGATTGATAGCAGAGGCTTTGATTTATCTCTTTCTTTTTCTCTTCTGTTTCTTAGTCTCTTAGAGGCTTTGTTCTAATCATTGACTGTTTCTTTTAGTAGAGCTTAGGAATCTTTCAATGTATATTAGCTGTTCTTCTTCCTCTCTTTGCTAATCATTGTTTTAGCAGAAGCTTACATAGTTTTTCTTGGAACGGCTAACGTATTATGTTACAAGTCTATAAGATCCTACATCGATTGGAGAGGAGAACGAGTGCCGACAAAGACGCTGGACCCTGAAGGGAGTGGATTGTGAAATACCACATAGGTCGGGAGGAGAACGAATCATTCTTTACAAGGGTGTGGAAACCTCTTTATAGCAGACGCGTTTTAAAAACCTTGAAGGAAAACTCC CGATTATTTTATTTTATTTTATCTAAAAAAAGGGAGTGAAAATGACTGCAACTGTACTGGAAAGGGACCAAGCTGGGAGGGTATACTAAAAGGAAGAAGAGCTCAATGAAAATAGGAATTCGCGTCTTCAATCTTCTAATTAAATTCAACAAGCTGTCCACGAGCTTCATCGATTTTTGAACAAACCCCATCTGCCTTTGCAAATTTCCCCTCGTTTTCCCCTTTCTTTACTGTCCTCTTCGTCAAAAGGACTCTGGTTCTCTGCATTTCCAGTCGCCCACACGCTCCATCGCCCCCTTTGGGACCTCTGGAAATGGCTGCCATGCTTCTGCTGCTCTCTGGTTTCTCCATTTTCACTCTCTGATGGCTGTTTTTGGGGCTACGAAAAGAATTTACAGGCGGAGACTAAGAGCCAATTGATTCCTGGCTTCACTATCAACCATGAAAGGAGGATCAGAGAATGGATGGCATTACTTTAAGTCTCTTCATTTTAGAGGTAAACCAGCCAACAATTTGTGCTTACTTCAGACCTCTGCCAGTACTCCGGGCGAAACTCCGGTCTATCTCAACGTGTATGACTTAACACCTGCAAATGGCTACATCTACTGGGCTGGTCTCGGCATCTTTCACTCCGGCATAGAAGTTTACGGGGTTGAATATGCGTTTGGAGCCCACGACTATCCTACGAGTGGTATCTTTGAGGTCGAACCTCGGACATGCCCTGGATTCAAGTTTAGGAAGTCGATTTATATCGGTACGACCTGCTTGGACCCAATCCAAGTAAGAGACTTTATGGAGTGTGAAGCTGCAAACTATCATGGCGATTCGTATCACTTGATCGTGAAGAATTGCAACCATTTCTGTGAGGATATATGCAGAAAGCTAACTGGGAAACGCATACCGAAATGGATAAATCGGCTTGCGAGATTAGGTTCCAAATGCAACTGCATACTCCCGAAAGCTCTCAAGGCCACAACCGTGCAACACGACCCGGGATTTGAGGGACAGGACAGCGAAAAGAAAAGACTAAGAAGCGGTTTCGGTTGCTTATCCTCAATCTCTATGAATCAGAAGGAAGTTTCAATATCTTCACTGTTTCTACACTCTCACTATAAAGGCTGCCTACCTCCATGGGAACTGAAACGATCCAAAAGTTGGTCGTTCAAGTAAGGGGAAGATGACTTACCTCAATCCGAACTTTCTTACGAGGTTTGTTCTTCGAGTTCTCGAGATAATAGCCATGGGAGCTGACTGGTCTGAGGTTTGAGGATTGATAGCAGAGGCTTTGATTTATCTCTTTCTTTTTCTCTTCTGTTTCTTAGTCTCTTAGAGGCTTTGTTCTAATCATTGACTGTTTCTTTTAGTAGAGCTTAGGAATCTTTCAATGTATATTAGCTGTTCTTCTTCCTCTCTTTGCTAATCATTGTTTTAGCAGAAGCTTACATAGTTTTTCTTGGAACGGCTAACGTATTATGTTACAAGTCTATAAGATCCTACATCGATTGGAGAGGAGAACGAGTGCCGACAAAGACGCTGGACCCTGAAGGGAGTGGATTGTGAAATACCACATAGGTCGGGAGGAGAACGAATCATTCTTTACAAGGGTGTGGAAACCTCTTTATAGCAGACGCGTTTTAAAAACCTTGAAGGAAAACTCC ATGAAAGGAGGATCAGAGAATGGATGGCATTACTTTAAGTCTCTTCATTTTAGAGGTAAACCAGCCAACAATTTGTGCTTACTTCAGACCTCTGCCAGTACTCCGGGCGAAACTCCGGTCTATCTCAACGTGTATGACTTAACACCTGCAAATGGCTACATCTACTGGGCTGGTCTCGGCATCTTTCACTCCGGCATAGAAGTTTACGGGGTTGAATATGCGTTTGGAGCCCACGACTATCCTACGAGTGGTATCTTTGAGGTCGAACCTCGGACATGCCCTGGATTCAAGTTTAGGAAGTCGATTTATATCGGTACGACCTGCTTGGACCCAATCCAAGTAAGAGACTTTATGGAGTGTGAAGCTGCAAACTATCATGGCGATTCGTATCACTTGATCGTGAAGAATTGCAACCATTTCTGTGAGGATATATGCAGAAAGCTAACTGGGAAACGCATACCGAAATGGATAAATCGGCTTGCGAGATTAGGTTCCAAATGCAACTGCATACTCCCGAAAGCTCTCAAGGCCACAACCGTGCAACACGACCCGGGATTTGAGGGACAGGACAGCGAAAAGAAAAGACTAAGAAGCGGTTTCGGTTGCTTATCCTCAATCTCTATGAATCAGAAGGAAGTTTCAATATCTTCACTGTTTCTACACTCTCACTATAAAGGCTGCCTACCTCCATGGGAACTGAAACGATCCAAAAGTTGGTCGTTCAAGTAA MKGGSENGWHYFKSLHFRGKPANNLCLLQTSASTPGETPVYLNVYDLTPANGYIYWAGLGIFHSGIEVYGVEYAFGAHDYPTSGIFEVEPRTCPGFKFRKSIYIGTTCLDPIQVRDFMECEAANYHGDSYHLIVKNCNHFCEDICRKLTGKRIPKWINRLARLGSKCNCILPKALKATTVQHDPGFEGQDSEKKRLRSGFGCLSSISMNQKEVSISSLFLHSHYKGCLPPWELKRSKSWSFK
BLAST of Cp4.1LG05g12440.1 vs. Swiss-Prot
Match: PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.3e-56 Identity = 92/147 (62.59%), Postives = 116/147 (78.91%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. Swiss-Prot
Match: DESI2_HUMAN (Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.4e-28 Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. Swiss-Prot
Match: DESI2_MOUSE (Desumoylating isopeptidase 2 OS=Mus musculus GN=Desi2 PE=1 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.4e-28 Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. Swiss-Prot
Match: DESI2_PIG (Desumoylating isopeptidase 2 OS=Sus scrofa GN=DESI2 PE=2 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.4e-28 Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. Swiss-Prot
Match: DESI2_PONAB (Desumoylating isopeptidase 2 OS=Pongo abelii GN=DESI2 PE=2 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.4e-28 Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. TrEMBL
Match: A0A0A0LIW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G238790 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 1.0e-132 Identity = 222/245 (90.61%), Postives = 230/245 (93.88%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. TrEMBL
Match: W9R104_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026945 PE=4 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 8.8e-108 Identity = 178/245 (72.65%), Postives = 209/245 (85.31%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. TrEMBL
Match: A0A061E0R9_THECC (PPPDE thiol peptidase family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_007291 PE=4 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 2.4e-105 Identity = 174/241 (72.20%), Postives = 206/241 (85.48%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. TrEMBL
Match: B9RZB9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0937670 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 4.1e-105 Identity = 173/245 (70.61%), Postives = 203/245 (82.86%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. TrEMBL
Match: B9H0M9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s15840g PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 4.1e-105 Identity = 174/240 (72.50%), Postives = 202/240 (84.17%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. TAIR10
Match: AT1G47740.1 (AT1G47740.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 341.7 bits (875), Expect = 3.8e-94 Identity = 158/243 (65.02%), Postives = 190/243 (78.19%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. TAIR10
Match: AT5G25170.1 (AT5G25170.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 233.0 bits (593), Expect = 1.9e-61 Identity = 116/205 (56.59%), Postives = 135/205 (65.85%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. TAIR10
Match: AT1G80690.1 (AT1G80690.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 226.1 bits (575), Expect = 2.3e-59 Identity = 104/179 (58.10%), Postives = 127/179 (70.95%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. TAIR10
Match: AT5G47310.1 (AT5G47310.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 224.2 bits (570), Expect = 8.8e-59 Identity = 94/153 (61.44%), Postives = 119/153 (77.78%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. TAIR10
Match: AT4G17486.1 (AT4G17486.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 221.1 bits (562), Expect = 7.5e-58 Identity = 92/147 (62.59%), Postives = 116/147 (78.91%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. NCBI nr
Match: gi|449455202|ref|XP_004145342.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis sativus]) HSP 1 Score: 480.7 bits (1236), Expect = 1.5e-132 Identity = 222/245 (90.61%), Postives = 230/245 (93.88%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. NCBI nr
Match: gi|659118686|ref|XP_008459251.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis melo]) HSP 1 Score: 479.2 bits (1232), Expect = 4.3e-132 Identity = 221/245 (90.20%), Postives = 229/245 (93.47%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. NCBI nr
Match: gi|703097794|ref|XP_010096210.1| (hypothetical protein L484_026945 [Morus notabilis]) HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-107 Identity = 178/245 (72.65%), Postives = 209/245 (85.31%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. NCBI nr
Match: gi|694430497|ref|XP_009342724.1| (PREDICTED: deSI-like protein At4g17486 [Pyrus x bretschneideri]) HSP 1 Score: 391.3 bits (1004), Expect = 1.2e-105 Identity = 177/245 (72.24%), Postives = 205/245 (83.67%), Query Frame = 1
BLAST of Cp4.1LG05g12440.1 vs. NCBI nr
Match: gi|694444013|ref|XP_009348550.1| (PREDICTED: deSI-like protein At4g17486, partial [Pyrus x bretschneideri]) HSP 1 Score: 391.3 bits (1004), Expect = 1.2e-105 Identity = 177/245 (72.24%), Postives = 205/245 (83.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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