Cp4.1LG05g10490.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGTTATTCCCAAAAAGAAAAAAGAGCGAGAAACCCCAATAGTCAATCAAAATTGTATTTGGATCCTCCGATCATTGCAGAGCAAAGCTCATTCGGCGGATTTAAAGACGAAGGCGTCTCTTGAGAGTTCGAGAATCGAAAATGGAGATTGGAGATTTTGCAGCCATTTTTGGGGAACCCAAGGTGGAGTGGATAAACAGGGGTTCGCTTACTTCGCACCCATTTTTGTTCCATGTTCATACTCCTAATCCCTCGCATCTTAGATTTTGTGTTACTGATTTCCATTCAAACACTTGGGAATCCACCAAATCGATTCTCCAGCTTCACGACATGGTGGGCTTCTTTAATTCTCTCTGTACGTTCTCTCTTTCTTACTTCCTTCTTTGATTTCTACTCATTTTTTGTTGTGGTTTCTTAGAATTGATTGGTGATCAGAACCCTAGTTTATGTTAATTTGTGTTTGTTCAGAGGGATGAGATTGGAATCGGAGGGGCTATGTCAGAATTTGTTGATTATATCATTACTTCCCTGAAATTTGGAGATGTAAGGCTTAGGTTGGAAGAACAATCGGTGGATGATGGTACTCTTCTTAGAATTATGATTGCTTCAAGTATTCTTAACCATTCAAATATGTTTTGAAAGTTGAAACCCCTTTTTTTCCATTTTGTTTTGCTTCGTCAGGTGCTGCATTTGCCAAATTATTTGCTCAGAAATCTAAAGGAATGCCTGTTTTTTCCCTTTCTCTCACGAAACTCTTTGATTGTGCTGCTTCCGAAGCTATAGCTACTCTGTCCTTGGGGCTCTTTAACTCATTAAAAGCCAAGGAATGTTCACTTCTAAAAGGTTTTCATCGCTTATCTATAGACTGCCTATACTATAATCATATATGTATATATAACAATGAATTTCTTTAATGTGATGGTATCTGGAAAAAAGTTAGAAGGTTGTTATAAAAATATTGTGAGATCCCACGTTAGATGGGGAGAAGAACGATGAATTCTTTATAAGGGTGTGGAAACCTCTCCCTAACATACATGCTTTCTAAAAACCTTGAGGGGAAGTCCGAAAGGGAAAGCTCAAAGAGAAGAATACCTGCTAGTGGTGGGCTTGAGCTGTTACAAATGGTATTAGGGCCAGACATGAGGCGATATGCCAGCGAGGAGGCTAAGTACCGAAGGGGGTGGACACGAGGCGGTGTGCCAGTAAGGGTGCCGGGCCTCGAAAGGGGGTGCATTAGGGGGTCTCACAAGAAGGGAACGAGTGTCAGCGAGGACGCTGGGCTCTGAAGGGGGGTGGATTGTGAGATCCCACCGATTGGGGAGGGGAACGGAACATTCTTTATAAGGGTAGGCTTGGGCTGTTACAAATATATGTTTAAGCTTTTGGTATCCGACTTGCATTACCCTCAAAACTTGTCACAACGTTCTTGAAAATAGTTTGGTATTTGAATCTCATTTTTTTGACTTTCATTGGTGATATTGAACTGGCTCAAATGCTACCATCAGAGAATTTCTTGGAAGACATTTAACTTGGAGATTACATTGTTTATATTCATATTCTACACCAAACTATATAGTTTACACTGTTCTGTTTCTTCTTTGTTTTTCCTTTTTGGTTATGAATCTGTATCTCTCACTTGTCTTGATAACTTTGGTAACATAGTTTGATGTCATTGACTTTCCTTTTGTACTAATTTTTTAGAACAAGAGCGCTCCCTTCAGTTGACGACCATGATATCAGCCGAAAAGGTATATCCATCAACTTCTCACACTGTAAATAGACATTATATCATGATGGGCACTTTTACTCTCGTAGGTACCTTTCTATTGTCTTGAAATACCAATGATCCCTCTTCAAATCATAATTGAAACGGTTTACTCTGGTCGGTATTGTTGTTGTTGCCTGTTTATTTGTTTCGATGTGTTGCGTTATTTCTCTGACTTTGCATTTGAAACTTCATTGAATGAAGAATTTGGATGCCCTTTTATCTGATTCAAGTCAGTAGGTAATTTATAGAATTAATTCTTATTGATACCAGAGGGGTACATGCCAAGGGAGGATTTGAGAGCTCTTATCTCTTCTAAAGCTTAAAGGACGCTTAAGCCGAAAAGCTACCCCTCTACGATCTATGTATATATATTCATGAAATGACTAGAACATCAATTGTAGAGCTCCAATAATAGAGATTCTTCTCGTTTCCTGCTGCTCTTGTTCTCGTCCTACCGACATTAGTGGAGATGATGGCATTTCAACTTTTGAAGATAATGCTATAACTTAGCCATATTTCTGTTGAAAAGGCCATCATAATGTCAATATATTCCTTATCCACAACGAATTCCAAGTCGTCGGTCTCTCTATCTGGTACCGAACGTTCTTGTTTATATTTATTTTTACTTTGTTCATGTCAGGAGAAGTACGAAAGTATTCAAAGCCAACTCGGGCAATATACAAAGAAACAGAAGTTACAAAATATGAACGCCTCAAATTCTCCAGGTTTGTTCCTATGAAGAACCATCAAATTTATTTCATTATATATTTTCTACATGAACACTAATTGAATTTTCTTATGCTTCATAGACAAATCTATTGGTCATTATATTGGCTCGTCAAAAACCACCAATCGTGCAGTGCCAGCACATCGCAGGTCGGTATCTCAAAGCTACATTTATCACATAACATATTAATTTATTTCCATTAGAAGTAGTTGTATTTAGCATTGTATTTGGGCAGGGCGAAAACAAGAGGTGCCCTTTTGCAAGACTCTGAAGATGACAATGGTAGGTACTTTGAGAAGTTGAATGTCTTTGTTCCACTGTGCATAGTTTGAGTCCTAGAAAGCTGCTCTAGCCAATCACTCGCGGTGTCGAGTCCCTGCAAAAGGCTTAAAATGGGTCGAGGATTCCATGTTTAAACCGGGGTCAGGGTCGAGAGGCTCGTAGTTTTCCGAAATTGACAAACTTTTATGTCTTCCCAGGAAGATTTTTGTTTTTGTATTCTTTTCTTACAAATATATTTCTCTGTTTCTTATCGATTCTTTTTTCCATTTTTACTTTCAGAACAAGAACATTCCCTTCGATCGACATCGGAGGATAAGGTAGATAAATAAGTCGTTGATTACTGTCACGTTATGCTCTTATAGACAGGTTTTTATCTTGTAGTACCTCGAAATTAGTAGCTTCGGGTTCTTTAGAGCGTATTTTTTACTTATTAATTCTGCTCATACTTTATAAATCTTGAATTTATTTTCGAAAATGTCAGGAAAAGAAAAAAGAGTTACAAAATACAAATGCATCAGCCAATGTAGATGGGTTTCAAAAATCTCCTGGTATGCTTTTTATTAGATTCATTGATGTTGTTTGAGTGTACAAAAGGTTCTAAATTTTGAGCTTATTTTTTAACGTAATCGACTATTAAAATGTGTCGATCTTAGCAGACAAACCTGTTATTCATGATATAGGCTCGACAAAAATCACCAATCGTGTCGTGCCAGCGCATCGCAGGTCAGTTTCTACACTAAAATTGACCCGAGTTTATTCGTTATTGTTTGTCAAAACTAGTAAACATACTCTAGTTTTGTGTACTTGGGCAGGGGACGAACAAGAGGTGCCCTTCTGCAAGATGATGAAAATGACAATGACAGGTAAAACCCGACATTTGTGATGACGAATAACCAATCGTAGTTTCAATATCGAGGAGACAACGAAGTAATACCGATGAGCGATCGGTTTCATCTTTCCCAGTAAGGTTTAATTTTCCTGCCTATACCTATGACGAAAGAGCTTGTGCAACCAGATATTTGTTTCTTGTACATATTTATTTGCATTCGTACTAATCATATCGTGGAAATATCTTGATGCACGTGACATACAAAATACATGAGTAACATAAAAAAATACATGAGTTCTCTATAGCTTTAAATTATGACATTTATTTATGGTGTACATATCTCCATTCTTTTCATGACATAGCGTTCTTATGAGACATACAT AATGTTATTCCCAAAAAGAAAAAAGAGCGAGAAACCCCAATAGTCAATCAAAATTGTATTTGGATCCTCCGATCATTGCAGAGCAAAGCTCATTCGGCGGATTTAAAGACGAAGGCGTCTCTTGAGAGTTCGAGAATCGAAAATGGAGATTGGAGATTTTGCAGCCATTTTTGGGGAACCCAAGGTGGAGTGGATAAACAGGGGTTCGCTTACTTCGCACCCATTTTTGTTCCATGTTCATACTCCTAATCCCTCGCATCTTAGATTTTGTGTTACTGATTTCCATTCAAACACTTGGGAATCCACCAAATCGATTCTCCAGCTTCACGACATGAGGGATGAGATTGGAATCGGAGGGGCTATGTCAGAATTTGTTGATTATATCATTACTTCCCTGAAATTTGGAGATGTAAGGCTTAGGTTGGAAGAACAATCGGTGGATGATGGTGCTGCATTTGCCAAATTATTTGCTCAGAAATCTAAAGGAATGCCTGTTTTTTCCCTTTCTCTCACGAAACTCTTTGATTGTGCTGCTTCCGAAGCTATAGCTACTCTGTCCTTGGGGCTCTTTAACTCATTAAAAGCCAAGGAATGTTCACTTCTAAAAGAACAAGAGCGCTCCCTTCAGTTGACGACCATGATATCAGCCGAAAAGGAGAAGTACGAAAGTATTCAAAGCCAACTCGGGCAATATACAAAGAAACAGAAGTTACAAAATATGAACGCCTCAAATTCTCCAGACAAATCTATTGGTCATTATATTGGCTCGTCAAAAACCACCAATCGTGCAGTGCCAGCACATCGCAGGGCGAAAACAAGAGGTGCCCTTTTGCAAGACTCTGAAGATGACAATGAACAAGAACATTCCCTTCGATCGACATCGGAGGATAAGGAAAAGAAAAAAGAGTTACAAAATACAAATGCATCAGCCAATGTAGATGGGTTTCAAAAATCTCCTGACAAACCTGTTATTCATGATATAGGCTCGACAAAAATCACCAATCGTGTCGTGCCAGCGCATCGCAGGGGACGAACAAGAGGTGCCCTTCTGCAAGATGATGAAAATGACAATGACAGGTAAAACCCGACATTTGTGATGACGAATAACCAATCGTAGTTTCAATATCGAGGAGACAACGAAGTAATACCGATGAGCGATCGGTTTCATCTTTCCCAGTAAGGTTTAATTTTCCTGCCTATACCTATGACGAAAGAGCTTGTGCAACCAGATATTTGTTTCTTGTACATATTTATTTGCATTCGTACTAATCATATCGTGGAAATATCTTGATGCACGTGACATACAAAATACATGAGTAACATAAAAAAATACATGAGTTCTCTATAGCTTTAAATTATGACATTTATTTATGGTGTACATATCTCCATTCTTTTCATGACATAGCGTTCTTATGAGACATACAT ATGGAGATTGGAGATTTTGCAGCCATTTTTGGGGAACCCAAGGTGGAGTGGATAAACAGGGGTTCGCTTACTTCGCACCCATTTTTGTTCCATGTTCATACTCCTAATCCCTCGCATCTTAGATTTTGTGTTACTGATTTCCATTCAAACACTTGGGAATCCACCAAATCGATTCTCCAGCTTCACGACATGAGGGATGAGATTGGAATCGGAGGGGCTATGTCAGAATTTGTTGATTATATCATTACTTCCCTGAAATTTGGAGATGTAAGGCTTAGGTTGGAAGAACAATCGGTGGATGATGGTGCTGCATTTGCCAAATTATTTGCTCAGAAATCTAAAGGAATGCCTGTTTTTTCCCTTTCTCTCACGAAACTCTTTGATTGTGCTGCTTCCGAAGCTATAGCTACTCTGTCCTTGGGGCTCTTTAACTCATTAAAAGCCAAGGAATGTTCACTTCTAAAAGAACAAGAGCGCTCCCTTCAGTTGACGACCATGATATCAGCCGAAAAGGAGAAGTACGAAAGTATTCAAAGCCAACTCGGGCAATATACAAAGAAACAGAAGTTACAAAATATGAACGCCTCAAATTCTCCAGACAAATCTATTGGTCATTATATTGGCTCGTCAAAAACCACCAATCGTGCAGTGCCAGCACATCGCAGGGCGAAAACAAGAGGTGCCCTTTTGCAAGACTCTGAAGATGACAATGAACAAGAACATTCCCTTCGATCGACATCGGAGGATAAGGAAAAGAAAAAAGAGTTACAAAATACAAATGCATCAGCCAATGTAGATGGGTTTCAAAAATCTCCTGACAAACCTGTTATTCATGATATAGGCTCGACAAAAATCACCAATCGTGTCGTGCCAGCGCATCGCAGGGGACGAACAAGAGGTGCCCTTCTGCAAGATGATGAAAATGACAATGACAGGTAA MEIGDFAAIFGEPKVEWINRGSLTSHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSILQLHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFSLSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQLGQYTKKQKLQNMNASNSPDKSIGHYIGSSKTTNRAVPAHRRAKTRGALLQDSEDDNEQEHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTRGALLQDDENDNDR
BLAST of Cp4.1LG05g10490.1 vs. TrEMBL
Match: A0A0A0LK82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G335570 PE=4 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 3.8e-103 Identity = 204/273 (74.73%), Postives = 228/273 (83.52%), Query Frame = 1
BLAST of Cp4.1LG05g10490.1 vs. TrEMBL
Match: V4T1Y5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002244mg PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 8.8e-60 Identity = 135/253 (53.36%), Postives = 172/253 (67.98%), Query Frame = 1
BLAST of Cp4.1LG05g10490.1 vs. TrEMBL
Match: A0A059AK38_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00189 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.7e-58 Identity = 127/239 (53.14%), Postives = 164/239 (68.62%), Query Frame = 1
BLAST of Cp4.1LG05g10490.1 vs. TrEMBL
Match: G7LE39_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_8g093850 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54 Identity = 121/243 (49.79%), Postives = 160/243 (65.84%), Query Frame = 1
BLAST of Cp4.1LG05g10490.1 vs. TrEMBL
Match: I3T5J0_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54 Identity = 122/240 (50.83%), Postives = 154/240 (64.17%), Query Frame = 1
BLAST of Cp4.1LG05g10490.1 vs. TAIR10
Match: AT5G64010.1 (AT5G64010.1 unknown protein) HSP 1 Score: 156.8 bits (395), Expect = 2.2e-38 Identity = 95/234 (40.60%), Postives = 139/234 (59.40%), Query Frame = 1
BLAST of Cp4.1LG05g10490.1 vs. NCBI nr
Match: gi|659121917|ref|XP_008460879.1| (PREDICTED: uncharacterized protein LOC103499622 isoform X1 [Cucumis melo]) HSP 1 Score: 453.8 bits (1166), Expect = 2.5e-124 Identity = 243/313 (77.64%), Postives = 267/313 (85.30%), Query Frame = 1
BLAST of Cp4.1LG05g10490.1 vs. NCBI nr
Match: gi|778670289|ref|XP_011649429.1| (PREDICTED: uncharacterized protein LOC101217609 isoform X1 [Cucumis sativus]) HSP 1 Score: 432.6 bits (1111), Expect = 6.0e-118 Identity = 232/313 (74.12%), Postives = 260/313 (83.07%), Query Frame = 1
BLAST of Cp4.1LG05g10490.1 vs. NCBI nr
Match: gi|700207089|gb|KGN62208.1| (hypothetical protein Csa_2G335570 [Cucumis sativus]) HSP 1 Score: 382.9 bits (982), Expect = 5.4e-103 Identity = 204/273 (74.73%), Postives = 228/273 (83.52%), Query Frame = 1
BLAST of Cp4.1LG05g10490.1 vs. NCBI nr
Match: gi|778670291|ref|XP_004147362.2| (PREDICTED: uncharacterized protein LOC101217609 isoform X2 [Cucumis sativus]) HSP 1 Score: 367.5 bits (942), Expect = 2.4e-98 Identity = 201/282 (71.28%), Postives = 224/282 (79.43%), Query Frame = 1
BLAST of Cp4.1LG05g10490.1 vs. NCBI nr
Match: gi|659121919|ref|XP_008460880.1| (PREDICTED: uncharacterized protein LOC103499622 isoform X2 [Cucumis melo]) HSP 1 Score: 317.0 bits (811), Expect = 3.7e-83 Identity = 178/228 (78.07%), Postives = 194/228 (85.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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