Cp4.1LG05g04470.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGTTCTTAACAATGAGGCAGCAGGGGCAATATTCTGATTCAGGACTAAACTCATATTCTGGTTCTCAAATGCATCACGTTCCTAGTCAAAGGGTGGAACAAAGCCACCCTGATCCTTTTGAAGGACGGTTGGAAGCCTTCACTCCCGAAAGAGAGAATTCATTTGTAGCTTCAAAAAATGAGGATCAATGGAGATGGGAAAGAGATGAGTCGAAGATGCCAAACTCTATGGCCTCTCACATGTTCAATGAAGGCAAGCATTAATAGTGTGTGTATTGTTACTCCTGTCACTAATAGTTTGCTTGCACTTGTTTTCTTCAGAAATCGTTTTTTGCACTTATACATTACAATATCCTTCTTCAAGAGAATGGAAAACAAACAATCCTACGTGCTTGTTTATTGAAATCAATTTCAACATTCTTTGATTCCCACCTGTGCTTGCTATTCTATGTTGAGTTTTTTCCTTGGGAAAATGAAAAGTGAAGTTAACAACATGACTAACTACCTTATAGCTTATATACTTATAAAGTTTACTTTTAAATGATATAATTCGTGGATATAAGATGAATTATCAGATTGTTATTGAATAAGAAATGTAACCTCTAATGTTTTTAGATTCATCATTCTCTTCTCAAAAACTATCAAGAATTGTTTTTCATTTTCAAACCCGTGCATTGAATGCTTTTAATGTTTGTCAGCTATACTTGGAGAGCATATGAATTTGATCTGTTGTTTCATTTCCTCCCCTTTTTCCAATGTTAGCTTGAAAGGAAAATCTTAGACTCCAAGTATTGTGGGGCTTATCCAAAAAATACATTTATAGCCAATGTCAGATGATAGTATGTAGATAATTCAATTAGCTAGGGTTCCATACATGTGTAACAGTAATAAAATGATTCATTGATGCCAAATCAATGTACCTACCTTTCATAATGGTTGAATGGTGTGATATTCCTCATAGTATCAGGCTGTTAACTGTTTATTGGTAGAGCTGATTTTTGGTCATTGTTTATCCTAAATTCTTTACTACCTTACCCCCACTCAGATATTTTCGTTTTCATTGCTAAATTCGTCATTATATCATTTAGATGGTTGTATCAATTCTCCATGGCATGGGAAGGATTTTGCCTTTTCTTGTCAAACAAAGTTTTTGGAATTCCTGTAGTGAGAAATATGTTTGTTTAACATAGGTCAAGGGGGTGATGCCACAAGATCATACTTTCAAGGACAGAGACCTAATTCAAAATTGGTTCTTGAGAAAGGAAGCAATAGCGACCCCAGATCTCAATCCCATGGAAAAAACATGGAAAATAGGTTTGGGGATGGTCTGCTGCCACAGAATTTTGACGGTCTTGAGCAGAAATTTATCGATGACATAATCAAATTGGCCAAGGAACAAAATGATGCAGAGGATGAGGAAAATGCTCGACATAGAGAGGTATATTTGTATATTCCCATTTCACTTTCGTTATTATGAGCTGCATTCTTGTTTTTTCTTATCGTCTTTATCTAACATACTTCATTTTGATGCACATCTTCAGAGAATTATGGCAATCAATGCTCAGTATGAGGAACAATTGGCAGCACTTCGAGCTCGGCATGCTGGTCGTCGGGACGAGTTGCTTCAAAGGGAATCAAGTGCACGACAACATCAGTACCAGAAAGGAATAATGGATCATTACATGAATGGGGGCATTGGCCCCGGTGATCCTCGTGGCAATAGTGGAGTTACAAACTTACCTGCGGCTGGACAAGCACATCAAAATTATGAATCTGAACATTTCGATTCCTTCAGAGAACGAGCTCGGTTTCTTGGGAATTCTGGATGGGATCCTAATTTGGATGCTAGAGGGGCATATCCCGGGGGACGAGTTTATGACACTGGCTCA GTGTTCTTAACAATGAGGCAGCAGGGGCAATATTCTGATTCAGGACTAAACTCATATTCTGGTTCTCAAATGCATCACGTTCCTAGTCAAAGGGTGGAACAAAGCCACCCTGATCCTTTTGAAGGACGGTTGGAAGCCTTCACTCCCGAAAGAGAGAATTCATTTGTAGCTTCAAAAAATGAGGATCAATGGAGATGGGAAAGAGATGAGTCGAAGATGCCAAACTCTATGGCCTCTCACATATCATACTTTCAAGGACAGAGACCTAATTCAAAATTGGTTCTTGAGAAAGGAAGCAATAGCGACCCCAGATCTCAATCCCATGGAAAAAACATGGAAAATAGGTTTGGGGATGGTCTGCTGCCACAGAATTTTGACGGTCTTGAGCAGAAATTTATCGATGACATAATCAAATTGGCCAAGGAACAAAATGATGCAGAGGATGAGGAAAATGCTCGACATAGAGAGAGAATTATGGCAATCAATGCTCAGTATGAGGAACAATTGGCAGCACTTCGAGCTCGGCATGCTGGTCGTCGGGACGAGTTGCTTCAAAGGGAATCAAGTGCACGACAACATCAGTACCAGAAAGGAATAATGGATCATTACATGAATGGGGGCATTGGCCCCGGTGATCCTCGTGGCAATAGTGGAGTTACAAACTTACCTGCGGCTGGACAAGCACATCAAAATTATGAATCTGAACATTTCGATTCCTTCAGAGAACGAGCTCGGTTTCTTGGGAATTCTGGATGGGATCCTAATTTGGATGCTAGAGGGGCATATCCCGGGGGACGAGTTTATGACACTGGCTCA GTGTTCTTAACAATGAGGCAGCAGGGGCAATATTCTGATTCAGGACTAAACTCATATTCTGGTTCTCAAATGCATCACGTTCCTAGTCAAAGGGTGGAACAAAGCCACCCTGATCCTTTTGAAGGACGGTTGGAAGCCTTCACTCCCGAAAGAGAGAATTCATTTGTAGCTTCAAAAAATGAGGATCAATGGAGATGGGAAAGAGATGAGTCGAAGATGCCAAACTCTATGGCCTCTCACATATCATACTTTCAAGGACAGAGACCTAATTCAAAATTGGTTCTTGAGAAAGGAAGCAATAGCGACCCCAGATCTCAATCCCATGGAAAAAACATGGAAAATAGGTTTGGGGATGGTCTGCTGCCACAGAATTTTGACGGTCTTGAGCAGAAATTTATCGATGACATAATCAAATTGGCCAAGGAACAAAATGATGCAGAGGATGAGGAAAATGCTCGACATAGAGAGAGAATTATGGCAATCAATGCTCAGTATGAGGAACAATTGGCAGCACTTCGAGCTCGGCATGCTGGTCGTCGGGACGAGTTGCTTCAAAGGGAATCAAGTGCACGACAACATCAGTACCAGAAAGGAATAATGGATCATTACATGAATGGGGGCATTGGCCCCGGTGATCCTCGTGGCAATAGTGGAGTTACAAACTTACCTGCGGCTGGACAAGCACATCAAAATTATGAATCTGAACATTTCGATTCCTTCAGAGAACGAGCTCGGTTTCTTGGGAATTCTGGATGGGATCCTAATTTGGATGCTAGAGGGGCATATCCCGGGGGACGAGTTTATGACACTGGCTCA VFLTMRQQGQYSDSGLNSYSGSQMHHVPSQRVEQSHPDPFEGRLEAFTPERENSFVASKNEDQWRWERDESKMPNSMASHISYFQGQRPNSKLVLEKGSNSDPRSQSHGKNMENRFGDGLLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHAGRRDELLQRESSARQHQYQKGIMDHYMNGGIGPGDPRGNSGVTNLPAAGQAHQNYESEHFDSFRERARFLGNSGWDPNLDARGAYPGGRVYDTGS
BLAST of Cp4.1LG05g04470.1 vs. TrEMBL
Match: A0A0A0KI70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G426920 PE=4 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 3.7e-131 Identity = 242/281 (86.12%), Postives = 253/281 (90.04%), Query Frame = 1
BLAST of Cp4.1LG05g04470.1 vs. TrEMBL
Match: V4UDC9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028962mg PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 2.6e-84 Identity = 167/279 (59.86%), Postives = 210/279 (75.27%), Query Frame = 1
BLAST of Cp4.1LG05g04470.1 vs. TrEMBL
Match: A0A067E146_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023948mg PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.4e-80 Identity = 164/279 (58.78%), Postives = 208/279 (74.55%), Query Frame = 1
BLAST of Cp4.1LG05g04470.1 vs. TrEMBL
Match: M5VZJ7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009697mg PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79 Identity = 165/280 (58.93%), Postives = 204/280 (72.86%), Query Frame = 1
BLAST of Cp4.1LG05g04470.1 vs. TrEMBL
Match: W9QL24_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017136 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.2e-76 Identity = 162/285 (56.84%), Postives = 201/285 (70.53%), Query Frame = 1
BLAST of Cp4.1LG05g04470.1 vs. TAIR10
Match: AT5G22040.1 (AT5G22040.1 unknown protein) HSP 1 Score: 187.6 bits (475), Expect = 1.0e-47 Identity = 126/292 (43.15%), Postives = 177/292 (60.62%), Query Frame = 1
BLAST of Cp4.1LG05g04470.1 vs. TAIR10
Match: AT3G62330.1 (AT3G62330.1 Zinc knuckle (CCHC-type) family protein) HSP 1 Score: 50.1 bits (118), Expect = 2.6e-06 Identity = 32/93 (34.41%), Postives = 53/93 (56.99%), Query Frame = 1
BLAST of Cp4.1LG05g04470.1 vs. NCBI nr
Match: gi|700192853|gb|KGN48057.1| (hypothetical protein Csa_6G426920 [Cucumis sativus]) HSP 1 Score: 475.7 bits (1223), Expect = 5.4e-131 Identity = 242/281 (86.12%), Postives = 253/281 (90.04%), Query Frame = 1
BLAST of Cp4.1LG05g04470.1 vs. NCBI nr
Match: gi|778716776|ref|XP_004140174.2| (PREDICTED: uncharacterized protein LOC101221687 [Cucumis sativus]) HSP 1 Score: 475.7 bits (1223), Expect = 5.4e-131 Identity = 242/281 (86.12%), Postives = 253/281 (90.04%), Query Frame = 1
BLAST of Cp4.1LG05g04470.1 vs. NCBI nr
Match: gi|659097398|ref|XP_008449603.1| (PREDICTED: uncharacterized protein LOC103491440 [Cucumis melo]) HSP 1 Score: 475.7 bits (1223), Expect = 5.4e-131 Identity = 243/281 (86.48%), Postives = 253/281 (90.04%), Query Frame = 1
BLAST of Cp4.1LG05g04470.1 vs. NCBI nr
Match: gi|567862820|ref|XP_006424064.1| (hypothetical protein CICLE_v10028962mg [Citrus clementina]) HSP 1 Score: 320.1 bits (819), Expect = 3.8e-84 Identity = 167/279 (59.86%), Postives = 210/279 (75.27%), Query Frame = 1
BLAST of Cp4.1LG05g04470.1 vs. NCBI nr
Match: gi|568869240|ref|XP_006487836.1| (PREDICTED: uncharacterized protein LOC102625293 isoform X1 [Citrus sinensis]) HSP 1 Score: 320.1 bits (819), Expect = 3.8e-84 Identity = 167/279 (59.86%), Postives = 210/279 (75.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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