Cp4.1LG04g03500.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g03500.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transmembrane protein 97, predicted
Location	Cp4.1LG04 : 7201518 .. 7203710 (+)
Sequence length	989

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGACTCAACCATGGTTAACCTCAATAAATAAAATAAAATAAAAGCCATTTACATTTAAAAAATAAAAAATAAAACTCAGCTATAAGAATAGCCTTGAGAATTGAGCAGCCCAGCCCAAGATCCGATCAATTGCTCTGCTCAGAGACTCTGAGAAGAAAGCTCTGTGGAACCATGGGCGCTCTTCTCAAGCTCGTTGACGCTCTATTGTTCCTCGCATTTCTCGTACTTGCCGTCGTTGTGCCTTTAATCGATTTCCAGGAGGTATTGCCTAAAAGCCTTTACCCTGATTCTGTAATCGATCTCAAGAGGTGGTACGTCGCCCGATCGGGGGATTATTTAATGGCCGAGGCTCCTCATTTCGTCGTTGGCCTTATTTGGTTCGAGCTTCTTTTTCAATGGCCTCTTTTGTTTCTCAATCTCTATGCCTTCTTCAGCTCCAAGGCTTGGTACAGGACCACTTGCTTGATCTATGGCGTTTCTCTCGTGTCTTCCATGGTATTTTTCTGTTCCTGTTCGGATTAATTTGGTTTTTGATTGATGGAATTTGTTCATAGCCTGTTGATTTTATCTTTGTTTGATTGAATGTATCTATTTTAGGTTAGGATTGAGTAGGGAGATGATTTTGGATATGTTTAAGCATTTGGCGGAGTGGACGATGAATTTGAAGTTAGTAGAATTTATTCCAGTCTTGTAGAGATTCAATAGACATAACTTGGTTGTTATTCAGCTTTTCTAGACCATTTTTAGAAGAATGTCATTTCTAGATTCTTGATATATGTAGTTGATGATGCTGATAGAAGTTTTGGTTTCTTTTTTGATTTTAAGTTCAATAATATGGAGACCAGGATTCAATCCTGTAATCTCTTGGTTGATGGTATGTGTTAGGAATTACAAATCTCCACAATAGTATGATATTGTACACTTTGAGCATAAACTCTCATGGTTTTGTTTTTGGTCGTTGTATTCCTTATTTATAAACTCATGATCAGCTCCTTAATTAGTCGATGTGGGGCTCATCTCCCAACAATCTCTCTCATCGAACAAAGTACACCATAGAGCCTCCTCGGAGGCCTATGGAGCCTTCGAACAACCTCCCCTTAATCGAGACTCGACTCCTTCTCTAGAGCCTCAAACAAAATACACCCTTTGTTCGACACTTGAATCACTTTTGACTACACCTTAGAGACTCAACTTCTTTGTTCAACATTTGAGGAAACCACGAACCTCCACAATGGTATGATATTGTCCACATTGAGAACAAACTCTCGTGGTTTTGCTTTTAATTTTTCCAAAAGGGCTCATACCAATGGAGATGTATTCTTTACTTATAAACCCATGATCAATCTCTTAATTAGTCGATGTGGACTCTTGTACCAACAGTATGTGCTTTAACTAGCTGAATAATGCTCGGGTTGACCTAATCGAAATAATAGTTAGGTGGGATAGCTTTGTATGATGTTTTTAATTTCATAAGCTAGTATTGAACTAGCTTGGGAACTGCATTCTTGTCAATAAACTAAGGATTCAACATCAGACTTTTGGCTTTAAATGGTGCATTTGAGATAGCTAACTGCAAGATAAAAAGGATTTTTCTGCTTCGTTTGTTAACCTTCTTGTAGGGATACGCTAGTTTCTATATCATTTCCTTCAGAGAAATTTTACTTGTATTGAATCACATTATCTGGCTGTGTGATTTCAGTCTGCTGTGATGGGTGAAGTGGTTGGATCAAACCGGGCATCTAATACTCTGTTGACAATCTACTGGCCCTTCATGGGTTTGGGGGTGTTGGCCGTGCTACGCGGGCTCGTGCCATGCTCGAGCAAGGCTACGATCAACGGACCCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGAAGTGCCATCCTAGATCGCCAACGGTCTGTCTGTCCCGACCGAGCATATCACATTGTCGGACTGAGGATGTTGGTTCTTTAGGTAATGGTGCAACTCTCTCTTTTAACCTTCTAGCAGTCTTTCATTGTATGAGTGGTAATGGTTCGAATGAGCTTGATTTTTTAGTTTGATCCAATTCTTAGAGGCTCATTTGGTTGAAATATTTGATCGTTTTAAGAATAAAATTGAGTTAAGCCGAATCGAATTACATGAATGGTATTAATCCTTTTTTTAGCATTCGTATCACGATTTTACCATGGCTAAATTTTAGAGAC

mRNA sequence

TTTTGACTCAACCATGGTTAACCTCAATAAATAAAATAAAATAAAAGCCATTTACATTTAAAAAATAAAAAATAAAACTCAGCTATAAGAATAGCCTTGAGAATTGAGCAGCCCAGCCCAAGATCCGATCAATTGCTCTGCTCAGAGACTCTGAGAAGAAAGCTCTGTGGAACCATGGGCGCTCTTCTCAAGCTCGTTGACGCTCTATTGTTCCTCGCATTTCTCGTACTTGCCGTCGTTGTGCCTTTAATCGATTTCCAGGAGGTATTGCCTAAAAGCCTTTACCCTGATTCTGTAATCGATCTCAAGAGGTGGTACGTCGCCCGATCGGGGGATTATTTAATGGCCGAGGCTCCTCATTTCGTCGTTGGCCTTATTTGGTTCGAGCTTCTTTTTCAATGGCCTCTTTTGTTTCTCAATCTCTATGCCTTCTTCAGCTCCAAGGCTTGGTACAGGACCACTTGCTTGATCTATGGCGTTTCTCTCGTGTCTTCCATGTCTGCTGTGATGGGTGAAGTGGTTGGATCAAACCGGGCATCTAATACTCTGTTGACAATCTACTGGCCCTTCATGGGTTTGGGGGTGTTGGCCGTGCTACGCGGGCTCGTGCCATGCTCGAGCAAGGCTACGATCAACGGACCCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGAAGTGCCATCCTAGATCGCCAACGGTCTGTCTGTCCCGACCGAGCATATCACATTGTCGGACTGAGGATGTTGGTTCTTTAGGTAATGGTGCAACTCTCTCTTTTAACCTTCTAGCAGTCTTTCATTGTATGAGTGGTAATGGTTCGAATGAGCTTGATTTTTTAGTTTGATCCAATTCTTAGAGGCTCATTTGGTTGAAATATTTGATCGTTTTAAGAATAAAATTGAGTTAAGCCGAATCGAATTACATGAATGGTATTAATCCTTTTTTTAGCATTCGTATCACGATTTTACCATGGCTAAATTTTAGAGAC

Coding sequence (CDS)

ATGGGCGCTCTTCTCAAGCTCGTTGACGCTCTATTGTTCCTCGCATTTCTCGTACTTGCCGTCGTTGTGCCTTTAATCGATTTCCAGGAGGTATTGCCTAAAAGCCTTTACCCTGATTCTGTAATCGATCTCAAGAGGTGGTACGTCGCCCGATCGGGGGATTATTTAATGGCCGAGGCTCCTCATTTCGTCGTTGGCCTTATTTGGTTCGAGCTTCTTTTTCAATGGCCTCTTTTGTTTCTCAATCTCTATGCCTTCTTCAGCTCCAAGGCTTGGTACAGGACCACTTGCTTGATCTATGGCGTTTCTCTCGTGTCTTCCATGTCTGCTGTGATGGGTGAAGTGGTTGGATCAAACCGGGCATCTAATACTCTGTTGACAATCTACTGGCCCTTCATGGGTTTGGGGGTGTTGGCCGTGCTACGCGGGCTCGTGCCATGCTCGAGCAAGGCTACGATCAACGGACCCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGA

Protein sequence

MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNRASNTLLTIYWPFMGLGVLAVLRGLVPCSSKATINGPRPSNGRKKRA

Homology

[Close]

BLAST of Cp4.1LG04g03500.1 vs. Swiss-Prot
Match: TMM97_XENTR (Transmembrane protein 97 OS=Xenopus tropicalis GN=tmem97 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10
Identity = 43/154 (27.92%), Postives = 76/154 (49.35%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           M    +L++ + F  F     +  L+D Q VLP SLYP  ++DL +WY     D+LMA  
Sbjct: 1   MAVCARLLEWIFFFYFFSHIPITLLVDLQAVLPPSLYPQELLDLMKWYTVAFKDHLMANP 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKA-WYRTTCLIYGVSLVSSMSAVMGEVVG-- 120
           P +    ++ E + Q P   +  YAFF     W R   ++Y   + +++ A++G ++   
Sbjct: 61  PPWFKSFVYCEAILQLPFFPVAAYAFFKGGCKWIRIPAIVYSAHVATTVIAIIGHILFGE 120

Query: 121 ----------SNRASNTLLTIYWPFMGLGVLAVL 142
                     + +   TL++IY P++ + VL +L
Sbjct: 121 FPKSDVIAPLTQKDRLTLVSIYAPYLLVPVLLLL 154

[Close]

BLAST of Cp4.1LG04g03500.1 vs. Swiss-Prot
Match: TMM97_BOVIN (Transmembrane protein 97 OS=Bos taurus GN=TMEM97 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.1e-07
Identity = 34/107 (31.78%), Postives = 58/107 (54.21%), Query Frame = 1


Query: 13  FLAFLVLA--VVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEAPHFVVGLIWF 72
           FL F  L+   +  L+D Q VLP+ LYP  + +L++WY+    D L+   P +    ++ 
Sbjct: 13  FLGFYFLSHIPITLLMDLQGVLPRDLYPVELRNLQQWYIEEFKDPLLQTPPAWFKSFLFC 72

Query: 73  ELLFQWPLLFLNLYAFFSSKA-WYRTTCLIYGVSLVSSMSAVMGEVV 117
           EL+FQ P   +  YAFF     W RT  +IY V  ++++  ++  ++
Sbjct: 73  ELVFQLPFFPIAAYAFFKGGCKWIRTPAIIYSVHTMTTLIPILSTLL 119

[Close]

BLAST of Cp4.1LG04g03500.1 vs. Swiss-Prot
Match: TMM97_RAT (Transmembrane protein 97 OS=Rattus norvegicus GN=Tmem97 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.7e-07
Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = 1


Query: 1   MGALL--KLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMA 60
           MGA+   + V+ LL L F+    +   ID Q +LP  LYP    +L RWY     D LM 
Sbjct: 1   MGAVTARRCVEWLLGLYFVSHIPITMFIDLQALLPPELYPQEFSNLLRWYSKEFKDPLMQ 60

Query: 61  EAPHFVVGLIWFELLFQWPLLFLNLYAFF-SSKAWYRTTCLIYGVSLVSSMSAVM 113
           E P +    ++ EL+FQ P   +  YAFF  S  W R   +IY V  ++++  ++
Sbjct: 61  EPPVWFKSFLFCELVFQLPFFPIAAYAFFKGSCRWIRIPAIIYAVHTITTLIPIL 115

[Close]

BLAST of Cp4.1LG04g03500.1 vs. Swiss-Prot
Match: TMM97_MOUSE (Transmembrane protein 97 OS=Mus musculus GN=Tmem97 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06
Identity = 41/115 (35.65%), Postives = 57/115 (49.57%), Query Frame = 1


Query: 1   MGALL--KLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMA 60
           MGAL   + V+ LL L F+    +   ID Q VLP  LYP    +L RWY     D LM 
Sbjct: 1   MGALAARRCVEWLLGLYFVSHIPITLFIDLQAVLPPELYPQEFSNLLRWYSKEFKDPLMQ 60

Query: 61  EAPHFVVGLIWFELLFQWPLLFLNLYAFF-SSKAWYRTTCLIYGVSLVSSMSAVM 113
           E P +    +  EL+FQ P   +  YAFF  S  W R   +IY    ++++  ++
Sbjct: 61  EPPVWFKSFLLCELVFQLPFFPIAAYAFFKGSCRWIRIPAIIYAAHTITTLIPIL 115

[Close]

BLAST of Cp4.1LG04g03500.1 vs. TrEMBL
Match: A0A0A0K5K2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044230 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.5e-61
Identity = 121/166 (72.89%), Postives = 142/166 (85.54%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           MGA LKL+D LLFL FL+LA++ PLIDFQ + P +L+PD +IDLK  Y  + GDYLMAE+
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120
           P F+VGL+W EL FQWP++ LNLYAF +SK WY TTCLIYGVS+VSSMSAV+GE+VGSNR
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSKATINGPRPSNGRKKRA 167
           AS TLLTIY+PF+GLGVLA+LRGLVPCSSKA I G RPSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAITGTRPSNGRKKRA 166

[Close]

BLAST of Cp4.1LG04g03500.1 vs. TrEMBL
Match: A0A059DG37_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01714 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.3e-46
Identity = 98/167 (58.68%), Postives = 129/167 (77.25%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           MGAL+KLVDA+LFL FL++AV VPL D Q  LP+SL+PD+++DLKR Y  R GDYL+AE 
Sbjct: 1   MGALVKLVDAVLFLFFLLMAVCVPLFDAQACLPESLFPDALLDLKRGYSGRVGDYLVAEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120
           P F VGL+W E+LF WPL  LNLY   +++ W+RTTCLIYGVS+ +SM A++ E+ GS +
Sbjct: 61  PLFFVGLVWLEILFLWPLSILNLYGILAARPWFRTTCLIYGVSVATSMVAILSELTGSGK 120

Query: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSKATIN-GPRPSNGRKKRA 167
           AS+ LL +Y+PF+GL +LA LRGL+PCS+K T     +P+  RKKRA
Sbjct: 121 ASDDLLMVYFPFLGLSLLAFLRGLLPCSTKTTSTISKKPALARKKRA 167

[Close]

BLAST of Cp4.1LG04g03500.1 vs. TrEMBL
Match: V7AG62_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G104500g PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.3e-46
Identity = 101/167 (60.48%), Postives = 126/167 (75.45%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           MG +LKLVDA+LFL FL++AVV PLID Q  LP S +P+ ++ LK  Y    GDYL+AE 
Sbjct: 1   MGVVLKLVDAILFLFFLLIAVVAPLIDAQTCLPLSYFPEFLVQLKEHYTQDYGDYLLAEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120
           PHF VGL+W ELLFQWPL  LNLYA  +SK W+ TTCL+YGVS  +SM A++ E++ SNR
Sbjct: 61  PHFFVGLVWLELLFQWPLALLNLYAILTSKPWFNTTCLMYGVSTSTSMVAILSEMMNSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSKATIN-GPRPSNGRKKRA 167
           AS  L+T+Y  FMGLG LA+LRGL+ CSSK+T + G RP+  RKKRA
Sbjct: 121 ASEKLITVYASFMGLGALALLRGLLTCSSKSTSSLGKRPALTRKKRA 167

[Close]

BLAST of Cp4.1LG04g03500.1 vs. TrEMBL
Match: B9SDV6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0486820 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-45
Identity = 95/167 (56.89%), Postives = 125/167 (74.85%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           MGA+ KL+DA+LFL F+V+AV  PLID Q  LP +L+PD +IDLK+WY    GDYL++E 
Sbjct: 1   MGAITKLIDAILFLFFVVIAVAAPLIDAQTCLPLNLFPDMLIDLKKWYSNEYGDYLVSEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120
           PHF VG++W ELLFQWPL   NLY   +SK W+ TTCLIYG S+ +SM A+M E++GS +
Sbjct: 61  PHFFVGVVWIELLFQWPLALFNLYGILASKPWFNTTCLIYGASVFTSMGAIMAELMGSGK 120

Query: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSKATINGPRPSN-GRKKRA 167
           A+  L+ +Y PFMGLG+LA+LRGL+P SS + + G R +   RKKRA
Sbjct: 121 ATERLMMVYAPFMGLGILAILRGLMPNSSASIVLGKRATPLPRKKRA 167

[Close]

BLAST of Cp4.1LG04g03500.1 vs. TrEMBL
Match: A0A0L9V5M3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g118700 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.5e-45
Identity = 102/167 (61.08%), Postives = 125/167 (74.85%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           MG +LKLVDA+LFL FLV+AV  PLID Q  LP S +P+ ++ LK  Y    GDYL+AE 
Sbjct: 1   MGVVLKLVDAILFLFFLVIAVAAPLIDAQTCLPLSYFPEILVQLKDHYTHDYGDYLVAEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120
           PHF VGL+W ELLFQWPL  LNLYA  +SK W+ TTCL+YGVS  +SM A++ E++ SNR
Sbjct: 61  PHFFVGLVWLELLFQWPLALLNLYAILTSKPWFNTTCLMYGVSTSTSMVAILSEMMNSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSKAT-INGPRPSNGRKKRA 167
           AS+ LLT+Y  FMGLG LA+LRGL+ CSSK+T   G RP+  RKKRA
Sbjct: 121 ASDKLLTLYASFMGLGALALLRGLLTCSSKSTSALGKRPALMRKKRA 167

[Close]

BLAST of Cp4.1LG04g03500.1 vs. TAIR10
Match: AT2G32380.1 (AT2G32380.1 Transmembrane protein 97, predicted)

HSP 1 Score: 172.2 bits (435), Expect = 2.7e-43
Identity = 87/168 (51.79%), Postives = 124/168 (73.81%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           MGA  KL+DA+LFL F ++AV+ PLID Q  LP  ++P  ++DL RWY+   GDYL+ E 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120
           PHF+VGL+W ELL  WPL  +N+YA  + K+W+ TT ++YG S+V+SM+A++GE++GS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSKA-TINGPRPS-NGRKKRA 167
           AS  LL +Y PFMG+G+LA+LRGL+  S+K+    G RP+   R+KRA
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLLSQSNKSGGAVGKRPAILARRKRA 168

[Close]

BLAST of Cp4.1LG04g03500.1 vs. TAIR10
Match: AT1G05210.1 (AT1G05210.1 Transmembrane protein 97, predicted)

HSP 1 Score: 171.8 bits (434), Expect = 3.6e-43
Identity = 85/152 (55.92%), Postives = 114/152 (75.00%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           MGAL KL+D  LF+ F+ +A++ PLID Q  LP  +YP  + DLK  Y+A  GDYL+ E 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120
           PHF+VGL+W ELLF WPL   N+YA  + K+W+ TTCL+YG SLV+SM+A++G+++GS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSKAT 153
           AS+ LL +Y PFMG G+LAVLRGLV  S+K T
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTKNT 152

[Close]

BLAST of Cp4.1LG04g03500.1 vs. TAIR10
Match: AT1G05220.1 (AT1G05220.1 Transmembrane protein 97, predicted)

HSP 1 Score: 143.7 bits (361), Expect = 1.0e-34
Identity = 72/150 (48.00%), Postives = 106/150 (70.67%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           MGAL KL++  LF  F ++A+ VPL++ Q + P  +YP  + DLK WY +   DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120
           P F VGL+W E++F  PL  +N+YA  +SK+W+ TT L+YG S ++SM+A++G+++GS +
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSK 151
            +N LL  Y PF+GL +LA+LRGLV CS+K
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTK 149

[Close]

BLAST of Cp4.1LG04g03500.1 vs. NCBI nr
Match: gi|449453494|ref|XP_004144492.1| (PREDICTED: transmembrane protein 97-like [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 3.6e-61
Identity = 121/166 (72.89%), Postives = 142/166 (85.54%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           MGA LKL+D LLFL FL+LA++ PLIDFQ + P +L+PD +IDLK  Y  + GDYLMAE+
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120
           P F+VGL+W EL FQWP++ LNLYAF +SK WY TTCLIYGVS+VSSMSAV+GE+VGSNR
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSKATINGPRPSNGRKKRA 167
           AS TLLTIY+PF+GLGVLA+LRGLVPCSSKA I G RPSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAITGTRPSNGRKKRA 166

[Close]

BLAST of Cp4.1LG04g03500.1 vs. NCBI nr
Match: gi|659111037|ref|XP_008455545.1| (PREDICTED: uncharacterized protein LOC103495696, partial [Cucumis melo])

HSP 1 Score: 233.0 bits (593), Expect = 3.7e-58
Identity = 117/163 (71.78%), Postives = 141/163 (86.50%), Query Frame = 1


Query: 5   LKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEAPHFV 64
           LKL+DALLFL FL+LA++ P IDFQ + P++L+PD +IDLK  YV + GDY+MAE+P F+
Sbjct: 2   LKLIDALLFLIFLILAIISPPIDFQLIFPQTLFPDFLIDLKASYVRQYGDYIMAESPPFL 61

Query: 65  VGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNRASNT 124
           VGL+W EL FQWPL+ LNLYAF +SK WY+TTCLIYGVS+V+SMSAV+GE+VGSNRAS T
Sbjct: 62  VGLVWLELFFQWPLMLLNLYAFLASKPWYKTTCLIYGVSVVTSMSAVLGEMVGSNRASTT 121

Query: 125 LLTIYWPFMGLGVLAVLRGLVPCSSKATING-PRPSNGRKKRA 167
           LL +Y+PFMGLGVLA+LRGLVPCSSKA I G  RPSNGRKKRA
Sbjct: 122 LLAMYYPFMGLGVLAMLRGLVPCSSKAAITGTTRPSNGRKKRA 164

[Close]

BLAST of Cp4.1LG04g03500.1 vs. NCBI nr
Match: gi|702244222|ref|XP_010051049.1| (PREDICTED: transmembrane protein 97-like [Eucalyptus grandis])

HSP 1 Score: 193.4 bits (490), Expect = 3.3e-46
Identity = 98/167 (58.68%), Postives = 129/167 (77.25%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           MGAL+KLVDA+LFL FL++AV VPL D Q  LP+SL+PD+++DLKR Y  R GDYL+AE 
Sbjct: 1   MGALVKLVDAVLFLFFLLMAVCVPLFDAQACLPESLFPDALLDLKRGYSGRVGDYLVAEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120
           P F VGL+W E+LF WPL  LNLY   +++ W+RTTCLIYGVS+ +SM A++ E+ GS +
Sbjct: 61  PLFFVGLVWLEILFLWPLSILNLYGILAARPWFRTTCLIYGVSVATSMVAILSELTGSGK 120

Query: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSKATIN-GPRPSNGRKKRA 167
           AS+ LL +Y+PF+GL +LA LRGL+PCS+K T     +P+  RKKRA
Sbjct: 121 ASDDLLMVYFPFLGLSLLAFLRGLLPCSTKTTSTISKKPALARKKRA 167

[Close]

BLAST of Cp4.1LG04g03500.1 vs. NCBI nr
Match: gi|593214827|ref|XP_007132555.1| (hypothetical protein PHAVU_011G104500g [Phaseolus vulgaris])

HSP 1 Score: 193.4 bits (490), Expect = 3.3e-46
Identity = 101/167 (60.48%), Postives = 126/167 (75.45%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           MG +LKLVDA+LFL FL++AVV PLID Q  LP S +P+ ++ LK  Y    GDYL+AE 
Sbjct: 1   MGVVLKLVDAILFLFFLLIAVVAPLIDAQTCLPLSYFPEFLVQLKEHYTQDYGDYLLAEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120
           PHF VGL+W ELLFQWPL  LNLYA  +SK W+ TTCL+YGVS  +SM A++ E++ SNR
Sbjct: 61  PHFFVGLVWLELLFQWPLALLNLYAILTSKPWFNTTCLMYGVSTSTSMVAILSEMMNSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSKATIN-GPRPSNGRKKRA 167
           AS  L+T+Y  FMGLG LA+LRGL+ CSSK+T + G RP+  RKKRA
Sbjct: 121 ASEKLITVYASFMGLGALALLRGLLTCSSKSTSSLGKRPALTRKKRA 167

[Close]

BLAST of Cp4.1LG04g03500.1 vs. NCBI nr
Match: gi|502171632|ref|XP_004515073.1| (PREDICTED: transmembrane protein 97-like [Cicer arietinum])

HSP 1 Score: 193.4 bits (490), Expect = 3.3e-46
Identity = 103/167 (61.68%), Postives = 125/167 (74.85%), Query Frame = 1


Query: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60
           MG LLKLVDA+LFL FL++A+V PLID Q  LP S +PD +I++K WY    GDYL+A+ 
Sbjct: 1   MGVLLKLVDAILFLFFLLIAIVAPLIDAQTCLPLSYFPDFLINIKTWYTNEYGDYLVADK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120
           PHF VGL+W ELLFQWPL  LNLYA  SSK W+ TTCLIYGVSL +SM AV+ E+ GS +
Sbjct: 61  PHFFVGLVWLELLFQWPLSLLNLYAMLSSKHWFNTTCLIYGVSLSTSMVAVLSELTGSKK 120

Query: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSK-ATINGPRPSNGRKKRA 167
           AS  LLT+Y+PFM LG+LA LRGL+  SSK  +  G R +  RKKRA
Sbjct: 121 ASEKLLTMYFPFMCLGILATLRGLLSNSSKTGSAFGKRSALARKKRA 167

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g03500.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TMM97_XENTR	1.7e-10	27.92	Transmembrane protein 97 OS=Xenopus tropicalis GN=tmem97 PE=2 SV=1	[more]
TMM97_BOVIN	5.1e-07	31.78	Transmembrane protein 97 OS=Bos taurus GN=TMEM97 PE=2 SV=1	[more]
TMM97_RAT	8.7e-07	34.78	Transmembrane protein 97 OS=Rattus norvegicus GN=Tmem97 PE=2 SV=1	[more]
TMM97_MOUSE	1.5e-06	35.65	Transmembrane protein 97 OS=Mus musculus GN=Tmem97 PE=1 SV=1	[more]

BLAST of Cp4.1LG04g03500.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5K2_CUCSA	2.5e-61	72.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044230 PE=4 SV=1	[more]
A0A059DG37_EUCGR	2.3e-46	58.68	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01714 PE=4 SV=1	[more]
V7AG62_PHAVU	2.3e-46	60.48	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G104500g PE=4 SV=1	[more]
B9SDV6_RICCO	1.1e-45	56.89	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0486820 PE=4 SV=1	[more]
A0A0L9V5M3_PHAAN	1.5e-45	61.08	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g118700 PE=4 SV=1	[more]

BLAST of Cp4.1LG04g03500.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32380.1	2.7e-43	51.79	Transmembrane protein 97, predicted	[more]
AT1G05210.1	3.6e-43	55.92	Transmembrane protein 97, predicted	[more]
AT1G05220.1	1.0e-34	48.00	Transmembrane protein 97, predicted	[more]

BLAST of Cp4.1LG04g03500.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453494\|ref\|XP_004144492.1\|	3.6e-61	72.89	PREDICTED: transmembrane protein 97-like [Cucumis sativus]	[more]
gi\|659111037\|ref\|XP_008455545.1\|	3.7e-58	71.78	PREDICTED: uncharacterized protein LOC103495696, partial [Cucumis melo]	[more]
gi\|702244222\|ref\|XP_010051049.1\|	3.3e-46	58.68	PREDICTED: transmembrane protein 97-like [Eucalyptus grandis]	[more]
gi\|593214827\|ref\|XP_007132555.1\|	3.3e-46	60.48	hypothetical protein PHAVU_011G104500g [Phaseolus vulgaris]	[more]
gi\|502171632\|ref\|XP_004515073.1\|	3.3e-46	61.68	PREDICTED: transmembrane protein 97-like [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR016964	Sigma2_recept

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG04g03500	Cp4.1LG04g03500	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g03500.1:five_prime_utr:001	Cp4.1LG04g03500.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g03500.1:cds:002	Cp4.1LG04g03500.1:cds:002	CDS
Cp4.1LG04g03500.1:cds:001	Cp4.1LG04g03500.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g03500.1:three_prime_utr:001	Cp4.1LG04g03500.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g03500.1	Cp4.1LG04g03500.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016964	Transmembrane protein 97	PIR	PIRSF031032	TMP_97	coord: 1..157 score: 5.1
None	No IPR available	PANTHER	PTHR31204	FAMILY NOT NAMED	coord: 1..166 score: 2.1
None	No IPR available	PFAM	PF10914	DUF2781	coord: 9..143 score: 2.9