Cp4.1LG04g01000.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAAGTGTATTTTTGAGGGAGGAGGGACGGCCGGCCGCCGCTTTATCGGGAGTCTTTCTACTGTCGTCTCGTTCTCTTCTGGTCACAGCAAGCAATCTCTCTTCGAGTCAAATTTTTTAGGGTTTCAATTATATGAGGTTGGTTCTCCGATCCCTTTCCTTTTATCTCTCTTTCTCTATCCACACGTTACTGTCATGATTGATTCATTTACAGTTCATCTATCTCGTTCACGCCATCTGTGGATTATTTGTTGGATTTTACAGTCACTTGCTAGTTTCTTATGTTAATTTTACGAGAATTCATTGTATTTTTGAAATTTTAAGAAGTCGGAAGTATAACTATGTGATTTGCTGCGTTGATTTCAGTTCATAGAAACGTTTGTGATTTTTTTCTTTGTTCGAGGCTTACAGTATTCAGATTAAAAATAAAGAGGAGAGGATAAGGACTGAGGTTGGTTGATGAAATTGAAATTGACAGACATGGAGACCGTAGGGCATATATTAATCATTTGGAGGAAGACAAGAGTGATGTAGTTAAGTTTTGAATGGGGTTGTGTCGGGAGAGGAGTTAAGGGAAGATCAGGGGTTCATAAGTAAGGAACATTGTCTCCATTGGTATGATGTCTTTTGGAGAAACCAAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATTATGCCATTGTGGAGGTTCATGATTTCATACCATAGGCTTTGAGTCATGCCCTTAACTTAACCATGTCAATAGAATCCTTAAGTGTTGAACAAAGAAGTTGTGAGCCTCGAAGGTGTAATAAAAAATGACTCAAATGTCGAACAAAGAGTGTACTTTGTTCGAGGGCTCCAGAGAAGGAGTCGAGTCTCGACTGAGGGGAGGTTGTTTGAGGGCTCCATAGGCCTCAGGGGAGGTTTTATGGCTTAATTTGTTCAAGGGGAGGATTTTTTAGGATTTTTGGGAGAGGAGTTAAGGGGAAGATCATAAGTTTATAAGTAAGGAACACTATCTCCATTGGTATGAGGTATTTTGGGGAAACCCAAAGTAAAACCATGAGATATTACGCTCAAAGTGGACAATATTATACCACTGTGGAGGTTCGTGATTCCATAACAATAACAGGTAGGGTTCTTAGAATAATCTTTGTAATCATAGGACATTTTGTGTGGAATTAAGTCTTTCTGTTCTTGTGTTGATCCTCTTTATTTTCCTTTTCACTTAAAAATTATGATCATTAATTAACCTATCATTAAAGCTTCCTTGCACTGTTTTTATGCTTGTTCTTACAGTTTGGGCTCTACCAACTCCCTCTCCCTTCCCCTTATTATGCCTTTATTTCCTTTGTTTTGGTTTGACTGTGAATGGAATAATTTGACAGCCAGTAAGAAAATTGGGATAAACCATAGTTTTGGATCTATACTAACCCATTGGGCAACAGAGCCTCCATATACTGACCTAAAATACTAGGATCTAGCTCGTTTTTGTGAACTGAAACTGGTAGAATTACTTTTAGTTGAAAATAATGGTTTGAGTAATTTATTTCCAGTCATTAAAGGTTAAAGCATTTCTGATAAATGTATACATACCCATGGGGATATCGCTTAAGCTTGTGGAATTGGTCCTTCTTTCTTGTTTTGATTCATTTTCTGCCTCTTCACCTAGAGAAGCTGATCATTAATGAACCTGTTCTTCATGTTTCCCCTATAATTTTGAATTCTACTTCTTGTTATTTAGGCCCTACCTTCTTCCTCCCCCTCGCCCTTATCATGTCTGTACTTACTTGATGCACTCGGAATGGAATATATGTTGAGGATTATTGGGAGTGAGTCCCACCGTGGTTAATTTAGTGGAAGATCATGTGTTTATAAGTGAGGAATACTATCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGTTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGATTTCTAACAATATATTCACACCCTTTCATGAACCATTCTTTATCTACTGACTGTGCAGCAGGACCATCATTAAATGTTTTGTAGTTAAAAGAGATGGTCTGTGAGATTTTTTTCATCCTTTCTGATAAATGTAGTTTGTATGGAACAGCATGTTAGAAGGATCTGATTCTTCTCATCTTGAAAGTGGACAAGAATCTAAGGAGCAAATCGATGATCTTACTCCTGAAGACATTGCTTGGGCTGATTCTTGTCTGATTAAAGAGATACCAGATATTTTAGATGGCAATTGGAACCATATAAAGGATGCCTTGTTAGAAGTCCTCGATCTGTATCCTCAAGGTTTCGAATCTCCTCTTGCTGTTAGTGATACTGTTCCAGGAGGTATTAACGATTACATCGACGTTGACATGCTTCGGTTTAAGAATGTGAAGAAGCCAACAGAAAGAGATAGCGATGATCCTATGAACGATGTCGATTCTTCTCTTTCGTTGTCTTTTAGCACGAATCCACTTTTACCCATTTACAAAGAGGAGGATAATGTTCCAGGAGGTACTAGTGATGACATCGACATCGACATCGACATGCTTCTTTCTAATAATGTGAAGAAGCCTACATTTTTTGCGAAAGATAGCGATGATCGTATGAATGAAACAGGAATGGCTTCAGAAGATCAACAACACCACGACGACATCGATACTTCTCTATCGTTATCTTTTAACAAGAATCCATTTCTACCTACATACAAAGAGGAGGTAGATGAAAAGGAGAGTATTCAAACTGAATCTAGCCATGATTTACCAGAAATTGGATTTGAGCCTCCAATCAATGACATTTTCCAGGTCTGGGATTTGAACCTTCCTCCGATCGAAAACGATCTCGTCGAGCAGCTGAACAAAGCTCTTTCTGAAAATTCTACTGAATCAGTCCGTTTACAGGATAGTAATTTCAGAGTGGTGAAAGATTTCAATGACGATTTACTTGATAGCTTAATCGACAGCATATCTGACCTGTCTTTAGAACCGAAGAAATACTAGAAACATAGTATGGAGCTATTGATTTCTGAAATTCCGTGCGGCCGACACATGGCGCTCTGTTATTTGATAACTTCTCTCACATTCAAATAGAGGGTGCTTCCAACGAGGCTACTTGGAGGCTTAGATGATATAGTTTAGTGTGAATACATTTTTTTCTCAAGTGTTATGCCTTAGTGAAAATGATCTGATGTCTTTGATTCTTATCCTTGCAATTATCCTACGATTCTTCATTTTGCATTTTCTTATCTATTATTCTTATTTT ATAAAGTGTATTTTTGAGGGAGGAGGGACGGCCGGCCGCCGCTTTATCGGGAGTCTTTCTACTGTCGTCTCGTTCTCTTCTGGTCACAGCAAGCAATCTCTCTTCGAGTCAAATTTTTTAGGGTTTCAATTATATGAGCATGTTAGAAGGATCTGATTCTTCTCATCTTGAAAGTGGACAAGAATCTAAGGAGCAAATCGATGATCTTACTCCTGAAGACATTGCTTGGGCTGATTCTTGTCTGATTAAAGAGATACCAGATATTTTAGATGGCAATTGGAACCATATAAAGGATGCCTTGTTAGAAGTCCTCGATCTGTATCCTCAAGGTTTCGAATCTCCTCTTGCTGTTAGTGATACTGTTCCAGGAGGTATTAACGATTACATCGACGTTGACATGCTTCGGTTTAAGAATGTGAAGAAGCCAACAGAAAGAGATAGCGATGATCCTATGAACGATGTCGATTCTTCTCTTTCGTTGTCTTTTAGCACGAATCCACTTTTACCCATTTACAAAGAGGAGGATAATGTTCCAGGAGGTACTAGTGATGACATCGACATCGACATCGACATGCTTCTTTCTAATAATGTGAAGAAGCCTACATTTTTTGCGAAAGATAGCGATGATCGTATGAATGAAACAGGAATGGCTTCAGAAGATCAACAACACCACGACGACATCGATACTTCTCTATCGTTATCTTTTAACAAGAATCCATTTCTACCTACATACAAAGAGGAGGTAGATGAAAAGGAGAGTATTCAAACTGAATCTAGCCATGATTTACCAGAAATTGGATTTGAGCCTCCAATCAATGACATTTTCCAGGTCTGGGATTTGAACCTTCCTCCGATCGAAAACGATCTCGTCGAGCAGCTGAACAAAGCTCTTTCTGAAAATTCTACTGAATCAGTCCGTTTACAGGATAGTAATTTCAGAGTGGTGAAAGATTTCAATGACGATTTACTTGATAGCTTAATCGACAGCATATCTGACCTGTCTTTAGAACCGAAGAAATACTAGAAACATAGTATGGAGCTATTGATTTCTGAAATTCCGTGCGGCCGACACATGGCGCTCTGTTATTTGATAACTTCTCTCACATTCAAATAGAGGGTGCTTCCAACGAGGCTACTTGGAGGCTTAGATGATATAGTTTAGTGTGAATACATTTTTTTCTCAAGTGTTATGCCTTAGTGAAAATGATCTGATGTCTTTGATTCTTATCCTTGCAATTATCCTACGATTCTTCATTTTGCATTTTCTTATCTATTATTCTTATTTT ATGAGCATGTTAGAAGGATCTGATTCTTCTCATCTTGAAAGTGGACAAGAATCTAAGGAGCAAATCGATGATCTTACTCCTGAAGACATTGCTTGGGCTGATTCTTGTCTGATTAAAGAGATACCAGATATTTTAGATGGCAATTGGAACCATATAAAGGATGCCTTGTTAGAAGTCCTCGATCTGTATCCTCAAGGTTTCGAATCTCCTCTTGCTGTTAGTGATACTGTTCCAGGAGGTATTAACGATTACATCGACGTTGACATGCTTCGGTTTAAGAATGTGAAGAAGCCAACAGAAAGAGATAGCGATGATCCTATGAACGATGTCGATTCTTCTCTTTCGTTGTCTTTTAGCACGAATCCACTTTTACCCATTTACAAAGAGGAGGATAATGTTCCAGGAGGTACTAGTGATGACATCGACATCGACATCGACATGCTTCTTTCTAATAATGTGAAGAAGCCTACATTTTTTGCGAAAGATAGCGATGATCGTATGAATGAAACAGGAATGGCTTCAGAAGATCAACAACACCACGACGACATCGATACTTCTCTATCGTTATCTTTTAACAAGAATCCATTTCTACCTACATACAAAGAGGAGGTAGATGAAAAGGAGAGTATTCAAACTGAATCTAGCCATGATTTACCAGAAATTGGATTTGAGCCTCCAATCAATGACATTTTCCAGGTCTGGGATTTGAACCTTCCTCCGATCGAAAACGATCTCGTCGAGCAGCTGAACAAAGCTCTTTCTGAAAATTCTACTGAATCAGTCCGTTTACAGGATAGTAATTTCAGAGTGGTGAAAGATTTCAATGACGATTTACTTGATAGCTTAATCGACAGCATATCTGACCTGTCTTTAGAACCGAAGAAATACTAG MSMLEGSDSSHLESGQESKEQIDDLTPEDIAWADSCLIKEIPDILDGNWNHIKDALLEVLDLYPQGFESPLAVSDTVPGGINDYIDVDMLRFKNVKKPTERDSDDPMNDVDSSLSLSFSTNPLLPIYKEEDNVPGGTSDDIDIDIDMLLSNNVKKPTFFAKDSDDRMNETGMASEDQQHHDDIDTSLSLSFNKNPFLPTYKEEVDEKESIQTESSHDLPEIGFEPPINDIFQVWDLNLPPIENDLVEQLNKALSENSTESVRLQDSNFRVVKDFNDDLLDSLIDSISDLSLEPKKY
BLAST of Cp4.1LG04g01000.1 vs. TrEMBL
Match: A0A0A0K2C8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G006240 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 2.6e-45 Identity = 109/180 (60.56%), Postives = 128/180 (71.11%), Query Frame = 1
BLAST of Cp4.1LG04g01000.1 vs. TrEMBL
Match: B9RHD3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1450310 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.6e-18 Identity = 93/290 (32.07%), Postives = 132/290 (45.52%), Query Frame = 1
BLAST of Cp4.1LG04g01000.1 vs. TrEMBL
Match: A0A0B0PUE9_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_02755 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 6.1e-18 Identity = 87/326 (26.69%), Postives = 139/326 (42.64%), Query Frame = 1
BLAST of Cp4.1LG04g01000.1 vs. TrEMBL
Match: A0A0D2SZL2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G031900 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.0e-17 Identity = 83/326 (25.46%), Postives = 141/326 (43.25%), Query Frame = 1
BLAST of Cp4.1LG04g01000.1 vs. TrEMBL
Match: I1KDY2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G246300 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.3e-16 Identity = 85/279 (30.47%), Postives = 131/279 (46.95%), Query Frame = 1
BLAST of Cp4.1LG04g01000.1 vs. TAIR10
Match: AT4G38980.1 (AT4G38980.1 unknown protein) HSP 1 Score: 68.2 bits (165), Expect = 9.9e-12 Identity = 83/305 (27.21%), Postives = 135/305 (44.26%), Query Frame = 1
BLAST of Cp4.1LG04g01000.1 vs. NCBI nr
Match: gi|659068534|ref|XP_008444927.1| (PREDICTED: uncharacterized protein LOC103488123 [Cucumis melo]) HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48 Identity = 112/179 (62.57%), Postives = 131/179 (73.18%), Query Frame = 1
BLAST of Cp4.1LG04g01000.1 vs. NCBI nr
Match: gi|449461617|ref|XP_004148538.1| (PREDICTED: uncharacterized protein LOC101213547 [Cucumis sativus]) HSP 1 Score: 190.7 bits (483), Expect = 3.8e-45 Identity = 109/180 (60.56%), Postives = 128/180 (71.11%), Query Frame = 1
BLAST of Cp4.1LG04g01000.1 vs. NCBI nr
Match: gi|802708127|ref|XP_012084446.1| (PREDICTED: uncharacterized protein LOC105643839 isoform X2 [Jatropha curcas]) HSP 1 Score: 117.5 bits (293), Expect = 4.0e-23 Identity = 102/316 (32.28%), Postives = 164/316 (51.90%), Query Frame = 1
BLAST of Cp4.1LG04g01000.1 vs. NCBI nr
Match: gi|255543859|ref|XP_002512992.1| (PREDICTED: uncharacterized protein LOC8284369 [Ricinus communis]) HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18 Identity = 93/290 (32.07%), Postives = 132/290 (45.52%), Query Frame = 1
BLAST of Cp4.1LG04g01000.1 vs. NCBI nr
Match: gi|728849009|gb|KHG28452.1| (hypothetical protein F383_02755 [Gossypium arboreum]) HSP 1 Score: 99.8 bits (247), Expect = 8.7e-18 Identity = 87/326 (26.69%), Postives = 139/326 (42.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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