Cp4.1LG02g04620.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGATTTAGAGTTAGCTTCCGGTTCGGTGGGTATTTATTGAGTCCAACTGTGTAAACGAGTCTAGTTGCAAGTTCAGGTGGCAAAGGTCGGGCCGACGGCAGCCATGGCGGGTCCTCCCAGTCTCAGTGGCCCCATTAAGATGAAACTCGCCATCGGAAGAAGCTCCGGAAGAGGTCCAGCAGGTCTACGCCACAAACTGAGTAGATTGACTCAATCGGTCAGCTTTGAAATTGAAGTTTCAATCGTCGGTAGATATATTAGGTCTTCCTTTGTCCATTAATTACAAAGATTATTCATGTTGTCCGTCCCTGTCTTGGTTTGAAATCATTGAATGAGATGTGGAAATATTGGCGAGAAATCCGAGCTTTAAATTTCTGTAGGATTTGACTCTGTGAACAGCGACTGTGACGGGATAAGCCATGGCCTTGGGAATGGATCTTCTTCGAAATGTCGTTCCCCTTTTATTACTTTATCTAAGAAAAATACTCTCGAATTGTAGGAGATGGTAAGGCGAAAGAAGAAAAACATAGGAGGAAGAAGCTGCTGTACATGAACAAGATTTAACATTCATCTGATTTTACTACCAAGTAAGTGTAACTCTCTTGATAGCCAACCGAATTTCTTTTGAGCAATATGACTGGATTTGTTTGCTTTCACTGTAATGGCTTTGTTTTTCTTCACAAAATTTGATCAAATTAGTTGTTATTTGCGGCATAACGTTCAGTTGATCAACAATTCAAATTGATAAGTAAGAAAATCAGTGAGGAGTTGTGATTGGAATGGAATACTGAAGAATCAGTGGGAGATATTTAATCCTTTAGTTTCTGGTTCCTTTCAGATAGGTATGTTAAGAGCCAACAAACTTTAGAACAATTAGTGGGAGAGATCTGATTGTTGATTGCACGTAGAAAAAGAGATTAATGTCTGTTCAGACAAGAGAGATGTTCAAGCATAGGTTGATGTTTTGCATTTCAGCTAGCAGTATTCAGTTTGCAGATACCAGATATTTTCCTCTGTATTTATTCGATCTGATTGTTGATTGCGCGTTTGGTAATTTGAAACAAATATGAACACGAAGAACTGCAGATGTCCAATAGTTTGTTGTCCTAGATTAATTTTGTTGTCAAATGTTTTTATGTTGTAAGGTAACGATCAACTTGTCTCCTCATAATGTCGTCGGTCGTTTACTCACCAGATACGAATAGCAGCAGCAATTTTATCACAACTGCTATCTGTGAGTACCTCCTTATCACTGTTTTTTGTGAAAATATACGAAACATTATACTTGACACGAGTTAGACTTCTATTCATCACCACCTTAAACAAAAACATTGGCTTGCAGCTGTAGTAGTAACCTTGGTGATTTTTATTGTCATTGGTGCAATCTCTTGCTGCTTTGCTAGGAAAGCTAAGCAATGTATTGTCACAGAGTTGCGAAATGCAGTTGCTTCATCTGCATCAAATGTGGCACATTCATCTGCCCCAAATGCAGTTCCGGTTTGGGAAATCGATCAACCGACAATGGAAAAGTTCATCAAAGAAATGGCGGAACAGAGGCCTATAAGGTTCACTGCTCATCAACTATACTATTTCACAGGCAATTATTCGACACCACTCGGTTCGGGAGGATTCGGTACGGTCTATAAAGGAGAGTTCCCAAATGGAGTGAAGATTGCGGCGAAGGTTTTGAAGAGGAACTCGGACAAGCAGGCGGAGGAGCAATTTATGAATGAGGTAGGAACGATCGGGAAAACTTACCATATAAACTTGGTTAGGCTTAATGGGTTTTGTTATGACCATTATATGTGTGCACTGGTATTTGAGTACATGGAAAATCGATCTCTGGATAAGTATTTGTTTGGCAAAAATGAAGAACTTGATTGGGGGAAGTTACGTGATGTAGCCATTGGGACTGCTAAAGGTCTTGCTTACTTGCATGAGGAATGCCAACAGAAAATCATCCATTACGACATAAAGCCTGCAAACATTCTGTTGGATGAAAACTTCACTCCCAAAGTTGGTGATTTTGGCCTTGCCAAGCTTTGCAACCGGGACAGCACACATATGTCGCTCACTGGCTATCGTGGCACGCCTGGATATTCAGCACCGGAGTTCTTACTAAAGAACTATCCAATAACCCACAAGTGCGACGTGTATAGCTTCGGAATGGTATTGTTTGAGATCATTGGAAGAAAAAGGAATGGCGGTGTTACTGATTCTGGGAACCCAGATTGGTTTCCACAACATGTGTGGGAGGCTCAGGAAAAGGGTGAATTAGTTGAATTTGTTAGAAGATGTGGGTATGCTGAGGATGATAAAGAGGGAGTGATTTGGACGTGCGAGGTGGCTCTGTGGTGCATTCAGGACTGCCCCGACGAACGACCACCGATGAGTGCGGTGGTGAAGATGCTTGAAGGAGGTGTAGAAATAATGCCACCATCAAAGCCATTTCTGTACTTGGATCCAACTCCAAAAAGGAACAGTAGAGTATCGAATCTACAACAAACAAGCAGCAGTTCAGATTATTCAACCTCAAATGAAGACAGTGCCTCATATTGGTACAAGAAGACTACTCCAATAATGAAGAAGTACGAAATACAGATAGCAAGTTCTTAG AGAAGATTTAGAGTTAGCTTCCGGTTCGGTGGGTATTTATTGAGTCCAACTGTGTAAACGAGTCTAGTTGCAAGTTCAGGTGGCAAAGGTCGGGCCGACGGCAGCCATGGCGGGTCCTCCCAGTCTCAGTGGCCCCATTAAGATGAAACTCGCCATCGGAAGAAGCTCCGGAAGAGGTCCAGCAGGTCTACGCCACAAACTGAGTAGATTGACTCAATCGGTCAGCTTTGAAATTGAAGTTTCAATCGTCGGTAGATATATTAGGAGATGGTAAGGCGAAAGAAGAAAAACATAGGAGGAAGAAGCTGCTGTACATGAACAAGATTTAACATTCATCTGATTTTACTACCAAGTAACGATCAACTTGTCTCCTCATAATGTCGTCGGTCGTTTACTCACCAGATACGAATAGCAGCAGCAATTTTATCACAACTGCTATCTCTGTAGTAGTAACCTTGGTGATTTTTATTGTCATTGGTGCAATCTCTTGCTGCTTTGCTAGGAAAGCTAAGCAATGTATTGTCACAGAGTTGCGAAATGCAGTTGCTTCATCTGCATCAAATGTGGCACATTCATCTGCCCCAAATGCAGTTCCGGTTTGGGAAATCGATCAACCGACAATGGAAAAGTTCATCAAAGAAATGGCGGAACAGAGGCCTATAAGGTTCACTGCTCATCAACTATACTATTTCACAGGCAATTATTCGACACCACTCGGTTCGGGAGGATTCGGTACGGTCTATAAAGGAGAGTTCCCAAATGGAGTGAAGATTGCGGCGAAGGTTTTGAAGAGGAACTCGGACAAGCAGGCGGAGGAGCAATTTATGAATGAGGAAAAGGGTGAATTAGTTGAATTTGTTAGAAGATGTGGGTATGCTGAGGATGATAAAGAGGGAGTGATTTGGACGTGCGAGGTGGCTCTGTGGTGCATTCAGGACTGCCCCGACGAACGACCACCGATGAGTGCGGTGGTGAAGATGCTTGAAGGAGGTGTAGAAATAATGCCACCATCAAAGCCATTTCTGTACTTGGATCCAACTCCAAAAAGGAACAGTAGAGTATCGAATCTACAACAAACAAGCAGCAGTTCAGATTATTCAACCTCAAATGAAGACAGTGCCTCATATTGGTACAAGAAGACTACTCCAATAATGAAGAAGTACGAAATACAGATAGCAAGTTCTTAG ATGTCGTCGGTCGTTTACTCACCAGATACGAATAGCAGCAGCAATTTTATCACAACTGCTATCTCTGTAGTAGTAACCTTGGTGATTTTTATTGTCATTGGTGCAATCTCTTGCTGCTTTGCTAGGAAAGCTAAGCAATGTATTGTCACAGAGTTGCGAAATGCAGTTGCTTCATCTGCATCAAATGTGGCACATTCATCTGCCCCAAATGCAGTTCCGGTTTGGGAAATCGATCAACCGACAATGGAAAAGTTCATCAAAGAAATGGCGGAACAGAGGCCTATAAGGTTCACTGCTCATCAACTATACTATTTCACAGGCAATTATTCGACACCACTCGGTTCGGGAGGATTCGGTACGGTCTATAAAGGAGAGTTCCCAAATGGAGTGAAGATTGCGGCGAAGGTTTTGAAGAGGAACTCGGACAAGCAGGCGGAGGAGCAATTTATGAATGAGGAAAAGGGTGAATTAGTTGAATTTGTTAGAAGATGTGGGTATGCTGAGGATGATAAAGAGGGAGTGATTTGGACGTGCGAGGTGGCTCTGTGGTGCATTCAGGACTGCCCCGACGAACGACCACCGATGAGTGCGGTGGTGAAGATGCTTGAAGGAGGTGTAGAAATAATGCCACCATCAAAGCCATTTCTGTACTTGGATCCAACTCCAAAAAGGAACAGTAGAGTATCGAATCTACAACAAACAAGCAGCAGTTCAGATTATTCAACCTCAAATGAAGACAGTGCCTCATATTGGTACAAGAAGACTACTCCAATAATGAAGAAGTACGAAATACAGATAGCAAGTTCTTAG MSSVVYSPDTNSSSNFITTAISVVVTLVIFIVIGAISCCFARKAKQCIVTELRNAVASSASNVAHSSAPNAVPVWEIDQPTMEKFIKEMAEQRPIRFTAHQLYYFTGNYSTPLGSGGFGTVYKGEFPNGVKIAAKVLKRNSDKQAEEQFMNEEKGELVEFVRRCGYAEDDKEGVIWTCEVALWCIQDCPDERPPMSAVVKMLEGGVEIMPPSKPFLYLDPTPKRNSRVSNLQQTSSSSDYSTSNEDSASYWYKKTTPIMKKYEIQIASS
BLAST of Cp4.1LG02g04620.1 vs. Swiss-Prot
Match: LRK10_WHEAT (Rust resistance kinase Lr10 OS=Triticum aestivum GN=LRK10 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.8e-07 Identity = 27/71 (38.03%), Postives = 43/71 (60.56%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.4e-06 Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. Swiss-Prot
Match: Y5248_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.3e-06 Identity = 33/86 (38.37%), Postives = 44/86 (51.16%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. TrEMBL
Match: A0A0A0LHF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881750 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.1e-45 Identity = 101/174 (58.05%), Postives = 126/174 (72.41%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. TrEMBL
Match: A0A0A0LJF6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881740 PE=3 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.6e-36 Identity = 87/144 (60.42%), Postives = 105/144 (72.92%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. TrEMBL
Match: F6H3B1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g02510 PE=3 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.7e-33 Identity = 86/152 (56.58%), Postives = 107/152 (70.39%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. TrEMBL
Match: A0A0A0LEH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881760 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29 Identity = 71/117 (60.68%), Postives = 86/117 (73.50%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. TrEMBL
Match: A5ASM5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027110 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.4e-24 Identity = 66/117 (56.41%), Postives = 78/117 (66.67%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. TAIR10
Match: AT1G70250.1 (AT1G70250.1 receptor serine/threonine kinase, putative) HSP 1 Score: 57.0 bits (136), Expect = 2.1e-08 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. TAIR10
Match: AT4G23290.2 (AT4G23290.2 cysteine-rich RLK (RECEPTOR-like protein kinase) 21) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-07 Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. TAIR10
Match: AT5G24080.1 (AT5G24080.1 Protein kinase superfamily protein) HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07 Identity = 33/86 (38.37%), Postives = 44/86 (51.16%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. TAIR10
Match: AT1G11340.1 (AT1G11340.1 S-locus lectin protein kinase family protein) HSP 1 Score: 52.0 bits (123), Expect = 6.7e-07 Identity = 43/111 (38.74%), Postives = 57/111 (51.35%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. TAIR10
Match: AT5G39020.1 (AT5G39020.1 Malectin/receptor-like protein kinase family protein) HSP 1 Score: 52.0 bits (123), Expect = 6.7e-07 Identity = 28/72 (38.89%), Postives = 42/72 (58.33%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. NCBI nr
Match: gi|659132660|ref|XP_008466316.1| (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Cucumis melo]) HSP 1 Score: 196.1 bits (497), Expect = 8.1e-47 Identity = 106/177 (59.89%), Postives = 129/177 (72.88%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. NCBI nr
Match: gi|778687202|ref|XP_004136314.2| (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucumis sativus]) HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45 Identity = 101/174 (58.05%), Postives = 126/174 (72.41%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. NCBI nr
Match: gi|659132662|ref|XP_008466317.1| (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Cucumis melo]) HSP 1 Score: 167.5 bits (423), Expect = 3.1e-38 Identity = 90/143 (62.94%), Postives = 108/143 (75.52%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. NCBI nr
Match: gi|778687199|ref|XP_011652524.1| (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucumis sativus]) HSP 1 Score: 162.9 bits (411), Expect = 7.6e-37 Identity = 88/141 (62.41%), Postives = 106/141 (75.18%), Query Frame = 1
BLAST of Cp4.1LG02g04620.1 vs. NCBI nr
Match: gi|700205028|gb|KGN60161.1| (hypothetical protein Csa_3G881740 [Cucumis sativus]) HSP 1 Score: 160.6 bits (405), Expect = 3.8e-36 Identity = 87/144 (60.42%), Postives = 105/144 (72.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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