Cp4.1LG17g10340 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAACCCTACCCGAAATGCTAATTGGGTTGGGTTGATCCGGGTTGTTGGGTTTCCGGGTTGAATGTACACCATATAAGTAACCTAAACCCTTCTTTAAGCCCTCGCCGGCCTTCCACAATTTCTCCCGCGCGAAGCTGTCGCCGCCCTTCCACAATTCTCCCGCGAAGCCGTCGCCGCCCTTCCACAATTCTCCCGCGAAGCCGTCGCCGCCATAGCCAACGTTCGTCTACAACGCTTCGAAACCCGCACTTCGTCTACAACTTCCTATTTCATGGCGCCGAATAAGAGGAGGCTGCGAAACCCGCAGCCTTTTCTAACGGAAAACGAACTTGTGCCAAACAAGCATTCGAAAGCAAGAAAGCGCCATCATCAAGAGGATGAGACGCTTTTATCTTCTGGAATGAGCTCCAAGATATTTAGAGAAGCTCGTATTCAGCAGAAAGAAAATGAAATTGAAACTAGGAATCAAAACGCCAATCCTTTCTTTGAGCTTCCTGATGAAGAGGTTCCCAAGGATGATGAGGATGACATTGATGATTTTACTGGATTCTCTGAAACTCAAACTCAAATTGGTACTTATGAGGAGGTAGCGTAGCGTTCGCCAATCTAAGAATTTGATATATAACGTGCTTTACGTCTTTGTTTATCGGATTTCAATTGTTTTTTTTTTTTCCTCCAAATTATCTTCTGTATCAGGAGGACATTGCAGAGGAAGATGAGCGATTAGTGGAAGCTTTTTTATCAAAGGATGTAGGGCCACAACGTACTCTTGCTGATCTTATCGTGACGAAAATCAAAGAAAACGATGCTATCGTCTCTTCAGGTTCAGATATGTTTTAGTGAAGTTTCAGTTTGGTGATACGTTTTATAATAGTTGATTCATGTTGTGATTCCATTGCCATTGTTGTTTGCTAATGCAGATACACGGCCTCTGCCAAAATTAGATACCTCAGTCATAGACTTATACAAAGGGTATAAAATCTGTCAATTTTCTTGTTGTTATTTAGTAAAAGAAAGCTGGGATATATGTTTGAGCTAAATTGAAAAACTTCATGCAGAGTGGGAAAATCTCTCAACAAATATATGGCTGGGAAAGTACCCAAAGCTTTCAAACGCATCCCTTCCATGCCGCTCTGGGAGGAAGTTTTATATTTAACTGAGCCTGAAAATTGGTCTCCAAATGCAATGTTTCAGGCCACTAGAATTTTTGCATCCAATTTGGGAGTAAAAAAGGTGGAGAAATTCTATAAGCTTGTTTTGCTTCCAGCTGTAAGGAAAGACATTCAGAAGAATAAGCGGTTACACTTTGCCTTGTATCAAGCATTGAAAAAGTCCCTTTATAAACCCACTGCCTTCTTCAAAGGGATTTTGCTTCCTCTTTGTGAGGTATGTAATTCCTAACCATGACATCTCATGTCCATTATATTTCTTCATGAATTTTGGTTCCTACTTTCATATTCATTCTGAAGTAGCTTATGTTAGGATATTAAATTTTATCATGGGAAGGTGTGAATCAATCTAGATATGAAGGCTCTTGCCCTATTAGATATAGCTATTGCTCATGAGCTTTAGAATCTTCTGAAGTTTTGGGCACTATTAAATTATAAAAAGGGATGATCAAGAATGATGATTAATAATCGGTATGATGGGTTTTTTTTTTCCCAATTTTTCCTTTTTCTCAATGGTATTTATTGAAGTTTTTAGTAGTATATGCCATGAATTTTCAATCATTTTCTCTTTATTGTAGCAAAATATCATTTGTATTATCTACAAATTGGCGATGGGATACAAGAGCAACACCATTGCACACCAAGAAACCTTGAATATTTCCATAGGATGTTCATCTTTTAAAAATCTGCTCAATAAAAATTAGTTAAAATAGAAAGGGAGCCAATGGATCCCCTTGTCTTAATTTCATGAAGCTTTATTCTACCTCTCGGTCTTCCATTGAGGAAGATGGAAAATATTGTACCATATACGCACCCTGTGATCAATTTTATCCAAATTTAATAACTTTTTCTAGATCCAAATTTAATGCCCATCCTTTCATTCTTATAATTCATAGTCTTCCCCTTATTCTTTTTCCACAGATTATTGGGTCAATGATTTGTCTCCATTTGATACCATTTTTAATCCTTCTGTGCTTACTTTTGCTATTATTTTGTCCACACTGGCCACTGAACTTATGGGTCTACAGTCTTCATCAACTCCTTTTGCTTTCTCCACTTTACCTTCATTCTGCACTGTATAGTGTATATTGAAAGTGATACCTCAGCAATGTGTAGAGCTCTTAATTTTATTGCTTTGTTTTAATTTATGGTGCTCTAATGAAACCTTGGTTCTTTCTTTCTACAGTCTGGCACTTGTAGTCTGAGGGAGGCAGTGATAGTTGGAAGCATTATTGAAAAGGTTACGATTCCCGTGCTTCATTCAAGGCAAGTTAGTAACTTTAGTATCAATTTTTATGTTATTTTAAAATTTCATTTCTTGAGATCAGGCACACAGACAAAAACATGAAATGCTTTATACAGAGTTGTTTAATTGAAGGGTTTGGATTTGTCTTCTTTTTGCAGTGTTGCATTATTCAAGCTCGCAGAGATGGAATATTGTGGTACAACGAGGTATTAATTGTGAACTCATGCTAGTGATATTGTGCATAATTACAAATTTCAATAGCTATTTCTCTCTGAAAATCCACCATGGACTAATATCCAAAATTATTTCTACCTTCTCGAACCCCGACGTCCTCCATATATATACACCATTCACTAATCAACCTACCAAGTATTTACAATTATGCCACTAATATATCCTTGGTGGTTGTTTGGGGGGATGCGGGAAGGGTGATGGTAATATGCTGTTTTTTTTATTGGGGGAAGTGTCATGTCTTTGCCATGGTGGTTGTACATTTTGGATTACTGATAAAATTGCTTTTTTTTTTTTTGTGTGTAAATTACTGTGATCGTAATTGTTTAGCTATTGTTTTTTCCATGGTTTTCTGTATGAACTTGCTCTGTAGTACATGAATTCTCTAGAATTGGTGTGATAACATTTCCTTGTGCAGTACCTAACAAGTGTCTTCCTTTAATTTTTGAAGTTATTTTATCAAGCTTATCTTGGAGAAGAAATATGCATTGCCATACCGTGTAGTTGATGCAGTCGTCGCGCATTTTTTGAAGTTTCTAGACGAGACGCGAGTAATGCCTGTAATATGGCACCAATCACTGCTTGCATTTGTGCAGAGGTTAGCCAAAGAAAAACAAATAAATCTTGTTATCTGTGCCCATTTGATGTGGTAGATTTCATTTTCTTTAGAATAATAACTAATATTAGTTTCAACAAATAGTATATCACAAATACATTTGAATGCCTTGTTTCAAATATTGTGGTGTCACTTATGACTAGTTTTGCGTACATCTCATGCAGGTATAAAAATGAACTGCGGTTGGAAGATAAAGCAAACATTAGAATTCTTCTTCAAAGTCACAGGCACAAAGATGTAAGACTAAATTTTGTTTTGATTTGTAGCTTCACAAATCTTAATATTACTTTCCAGTATGGTGCCAATTATCTTAGAATTTGCCTTTTGGAATATAGGTTACTCCAGAAATTATGAGGGAACTAAATAATAGCCGCAGTCGTGGTGAGAAGGACACTACTACAAATATCCTTGAACATAGTAAAATTTCGTATCATTATTGTTAAATATCTTTTTGCAGGCAGGAGACTTATTTCATCTGTGTTCTTTATGCTATGATTTTTGTTGGCCAACAAAATTGTCCGTTTTCAAAACATCTTAAATAGGTTTAGATTACAAATTTCGTCCAGATAGCTTAGAAGTCGATGCGTTCTTGAAAGTTTGAACAGAGCTATTTAAACCATACCATATGGATTGATTTGAAACTGGAGTTGATCTATGCTGTTGATAGTGTTCCTTTTGTTTGGATTTTGGACTAATTAATGTGATGTTGAAGGAGTTTGTTCCTTGACTAGCTTTTACCTCCAGCTCCTGTGACTAAACCTGTGGAAGAAGACCGGTTCAATATTCCACTAGTTCCAATGGAAGAGGATTAGGATTGTTGACCTGTTCTTCTGCGGTGGCATCAGTTTCACAACATGGTTGGTTACTCCAGATTTTGTAGTGTTGAGAATTGATATGATATTGATTTCTATATATTAATTTATTTTTGCACATCGAAATCCCAGTCTGAAAACAAAAAGAGAGAAAAAGATGTGTATTTTTATATAGAAAAAGACGGGGAAAGATTTTATCTTTGACCTTAAAAATGTGTTGTGTTGCTAAGCAAGTCAATTTTAATTTCAAATCATAGTATGGATTAGTTGATAGGCAATTCTTCGTGAAAATTTGTAGTTATCCAGGAGCAGTTTTGTGGTTGAATGATATCCTTTTATTTTTTTATTTTTATTTTTGTTGGTTCTCTTTTTTAGCTTTTCCTTTCTGGTTTTCCCTCACGGTTTCTTTACCCTTATAAGCAATGTTTTGTTATCTTCTTCAACCGATGTAGGATCTCACAATCTACCCCTCTTAGAAGGTCCAGCGTCCTTGGTGGCGTTCGGTATCAGACTTTGATACTATTTGTAACCGGCCAAGCAGTTTATTGTTGTCATCTTTGGGCTTTTTTTTTTTTTTATTTATTTCCTCTCAAAGTTTTAGAACACTTCTAGTAGGAAGAGGTTTCCACTCTTAAGCAATGTTTCGTTATCTTCTCCGACCGACGTGGGATCTCACAGTCTACTCCTCTTGGGGTGCTTAGTGTCCTTGCTGACGCTCGGTATCGGACTCCGATACTATTTGTAACAGTCTAAGCTTATTATTGTCATCTTTGGCTTTTTTTTTTTTTTGCTTTCTCTCAGTTTTAACATTTCTGGTAGGAAGAGGTTTCTACTCTTATAAGCAATGTTTTCTCTTCTCTGATCGATGTGAGATTTCAGATGTTTCGTTTCTCTCCAATCGGGATTTCATGTGTATTACTATGATTTGAGCTTATTTTTTGAATCGAAGAACAGGTTTACGGAATGACAATGACATTTCCGAACCCAAGGATTTAAAACTATAGCATCCACATATGGACCTAATCTTTTAGAAAGACAAGCAGAATGGGACCAAAGGGGGAAAAGACCAAACAATTTCTATGAAATTACATAAGAAATGTTTGAGAAACTTTTGTTTGTTCCATCTCCCCCACTCAACACGCCCGCGTGAGAAACCTTTGCCAAATTTGTGGGCTACTCTTATTCTATCACTCTCTCTTTCTTTAATGCTTTTTTATGTACTATTACTTTTTTCTTTTCTTTTCTTTTTTTTTTTTGAAAAAGTTGCATTATTGTTTGGTTCTTAATTGGATGACAAAAATTTCCATGAGATTAGGTCGGATTCTCACTCGAACCAGATTTTCATGTTTCTTTGAATTATAGATAAGTTCT CAACCCTACCCGAAATGCTAATTGGGTTGGGTTGATCCGGGTTGTTGGGTTTCCGGGTTGAATGTACACCATATAAGTAACCTAAACCCTTCTTTAAGCCCTCGCCGGCCTTCCACAATTTCTCCCGCGCGAAGCTGTCGCCGCCCTTCCACAATTCTCCCGCGAAGCCGTCGCCGCCCTTCCACAATTCTCCCGCGAAGCCGTCGCCGCCATAGCCAACGTTCGTCTACAACGCTTCGAAACCCGCACTTCGTCTACAACTTCCTATTTCATGGCGCCGAATAAGAGGAGGCTGCGAAACCCGCAGCCTTTTCTAACGGAAAACGAACTTGTGCCAAACAAGCATTCGAAAGCAAGAAAGCGCCATCATCAAGAGGATGAGACGCTTTTATCTTCTGGAATGAGCTCCAAGATATTTAGAGAAGCTCGTATTCAGCAGAAAGAAAATGAAATTGAAACTAGGAATCAAAACGCCAATCCTTTCTTTGAGCTTCCTGATGAAGAGGTTCCCAAGGATGATGAGGATGACATTGATGATTTTACTGGATTCTCTGAAACTCAAACTCAAATTGGTACTTATGAGGAGGAGGACATTGCAGAGGAAGATGAGCGATTAGTGGAAGCTTTTTTATCAAAGGATGTAGGGCCACAACGTACTCTTGCTGATCTTATCGTGACGAAAATCAAAGAAAACGATGCTATCGTCTCTTCAGATACACGGCCTCTGCCAAAATTAGATACCTCAGTCATAGACTTATACAAAGGAGTGGGAAAATCTCTCAACAAATATATGGCTGGGAAAGTACCCAAAGCTTTCAAACGCATCCCTTCCATGCCGCTCTGGGAGGAAGTTTTATATTTAACTGAGCCTGAAAATTGGTCTCCAAATGCAATGTTTCAGGCCACTAGAATTTTTGCATCCAATTTGGGAGTAAAAAAGGTGGAGAAATTCTATAAGCTTGTTTTGCTTCCAGCTGTAAGGAAAGACATTCAGAAGAATAAGCGGTTACACTTTGCCTTGTATCAAGCATTGAAAAAGTCCCTTTATAAACCCACTGCCTTCTTCAAAGGGATTTTGCTTCCTCTTTGTGAGTCTGGCACTTGTAGTCTGAGGGAGGCAGTGATAGTTGGAAGCATTATTGAAAAGGTTACGATTCCCTGTTGCATTATTCAAGCTCGCAGAGATGGAATATTGTGGTACAACGAGCTTATCTTGGAGAAGAAATATGCATTGCCATACCGTGTAGTTGATGCAGTCGTCGCGCATTTTTTGAAGTTTCTAGACGAGACGCGAGTAATGCCTGTAATATGGCACCAATCACTGCTTGCATTTGTGCAGAGGTATAAAAATGAACTGCGGTTGGAAGATAAAGCAAACATTAGAATTCTTCTTCAAAGTCACAGGCACAAAGATGTTACTCCAGAAATTATGAGGGAACTAAATAATAGCCGCAGTCGTGCTCCTGTGACTAAACCTGTGGAAGAAGACCGGTTCAATATTCCACTAATAAGTTCT ATGGCGCCGAATAAGAGGAGGCTGCGAAACCCGCAGCCTTTTCTAACGGAAAACGAACTTGTGCCAAACAAGCATTCGAAAGCAAGAAAGCGCCATCATCAAGAGGATGAGACGCTTTTATCTTCTGGAATGAGCTCCAAGATATTTAGAGAAGCTCGTATTCAGCAGAAAGAAAATGAAATTGAAACTAGGAATCAAAACGCCAATCCTTTCTTTGAGCTTCCTGATGAAGAGGTTCCCAAGGATGATGAGGATGACATTGATGATTTTACTGGATTCTCTGAAACTCAAACTCAAATTGGTACTTATGAGGAGGAGGACATTGCAGAGGAAGATGAGCGATTAGTGGAAGCTTTTTTATCAAAGGATGTAGGGCCACAACGTACTCTTGCTGATCTTATCGTGACGAAAATCAAAGAAAACGATGCTATCGTCTCTTCAGATACACGGCCTCTGCCAAAATTAGATACCTCAGTCATAGACTTATACAAAGGAGTGGGAAAATCTCTCAACAAATATATGGCTGGGAAAGTACCCAAAGCTTTCAAACGCATCCCTTCCATGCCGCTCTGGGAGGAAGTTTTATATTTAACTGAGCCTGAAAATTGGTCTCCAAATGCAATGTTTCAGGCCACTAGAATTTTTGCATCCAATTTGGGAGTAAAAAAGGTGGAGAAATTCTATAAGCTTGTTTTGCTTCCAGCTGTAAGGAAAGACATTCAGAAGAATAAGCGGTTACACTTTGCCTTGTATCAAGCATTGAAAAAGTCCCTTTATAAACCCACTGCCTTCTTCAAAGGGATTTTGCTTCCTCTTTGTGAGTCTGGCACTTGTAGTCTGAGGGAGGCAGTGATAGTTGGAAGCATTATTGAAAAGGTTACGATTCCCTGTTGCATTATTCAAGCTCGCAGAGATGGAATATTGTGGTACAACGAGCTTATCTTGGAGAAGAAATATGCATTGCCATACCGTGTAGTTGATGCAGTCGTCGCGCATTTTTTGAAGTTTCTAGACGAGACGCGAGTAATGCCTGTAATATGGCACCAATCACTGCTTGCATTTGTGCAGAGGTATAAAAATGAACTGCGGTTGGAAGATAAAGCAAACATTAGAATTCTTCTTCAAAGTCACAGGCACAAAGATGTTACTCCAGAAATTATGAGGGAACTAAATAATAGCCGCAGTCGTGCTCCTGTGACTAAACCTGTGGAAGAAGACCGGTTCAATATTCCACTAATAAGTTCT MAPNKRRLRNPQPFLTENELVPNKHSKARKRHHQEDETLLSSGMSSKIFREARIQQKENEIETRNQNANPFFELPDEEVPKDDEDDIDDFTGFSETQTQIGTYEEEDIAEEDERLVEAFLSKDVGPQRTLADLIVTKIKENDAIVSSDTRPLPKLDTSVIDLYKGVGKSLNKYMAGKVPKAFKRIPSMPLWEEVLYLTEPENWSPNAMFQATRIFASNLGVKKVEKFYKLVLLPAVRKDIQKNKRLHFALYQALKKSLYKPTAFFKGILLPLCESGTCSLREAVIVGSIIEKVTIPCCIIQARRDGILWYNELILEKKYALPYRVVDAVVAHFLKFLDETRVMPVIWHQSLLAFVQRYKNELRLEDKANIRILLQSHRHKDVTPEIMRELNNSRSRAPVTKPVEEDRFNIPLISS
BLAST of Cp4.1LG17g10340 vs. Swiss-Prot
Match: BYST_NEMVE (Bystin OS=Nematostella vectensis GN=bysl PE=3 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.3e-83 Identity = 181/417 (43.41%), Postives = 258/417 (61.87%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. Swiss-Prot
Match: BYST_MONBE (Bystin OS=Monosiga brevicollis GN=bysl PE=3 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 4.6e-81 Identity = 174/397 (43.83%), Postives = 249/397 (62.72%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. Swiss-Prot
Match: BYST_HUMAN (Bystin OS=Homo sapiens GN=BYSL PE=1 SV=3) HSP 1 Score: 297.7 bits (761), Expect = 1.9e-79 Identity = 177/391 (45.27%), Postives = 248/391 (63.43%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. Swiss-Prot
Match: BYST_BOVIN (Bystin OS=Bos taurus GN=BYSL PE=2 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 4.7e-78 Identity = 177/392 (45.15%), Postives = 249/392 (63.52%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. Swiss-Prot
Match: BYST_RAT (Bystin OS=Rattus norvegicus GN=Bysl PE=1 SV=3) HSP 1 Score: 292.0 bits (746), Expect = 1.1e-77 Identity = 178/390 (45.64%), Postives = 246/390 (63.08%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. TrEMBL
Match: A0A0A0K9S2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G328290 PE=4 SV=1) HSP 1 Score: 675.2 bits (1741), Expect = 4.9e-191 Identity = 362/437 (82.84%), Postives = 390/437 (89.24%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. TrEMBL
Match: A0A0D2QPM4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G124600 PE=4 SV=1) HSP 1 Score: 521.5 bits (1342), Expect = 9.1e-145 Identity = 284/438 (64.84%), Postives = 344/438 (78.54%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. TrEMBL
Match: D7TP85_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g00820 PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 4.5e-144 Identity = 269/425 (63.29%), Postives = 329/425 (77.41%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. TrEMBL
Match: A0A061GU04_THECC (Bystin, putative isoform 1 OS=Theobroma cacao GN=TCM_041279 PE=4 SV=1) HSP 1 Score: 516.5 bits (1329), Expect = 2.9e-143 Identity = 283/438 (64.61%), Postives = 345/438 (78.77%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. TrEMBL
Match: A0A0D2PXY9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G124600 PE=4 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 3.2e-142 Identity = 276/409 (67.48%), Postives = 333/409 (81.42%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. TAIR10
Match: AT1G31660.1 (AT1G31660.1 Bystin (InterPro:IPR007955)) HSP 1 Score: 412.9 bits (1060), Expect = 2.3e-115 Identity = 225/441 (51.02%), Postives = 316/441 (71.66%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. NCBI nr
Match: gi|449443768|ref|XP_004139649.1| (PREDICTED: bystin [Cucumis sativus]) HSP 1 Score: 675.2 bits (1741), Expect = 7.1e-191 Identity = 362/437 (82.84%), Postives = 390/437 (89.24%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. NCBI nr
Match: gi|659124070|ref|XP_008461974.1| (PREDICTED: bystin [Cucumis melo]) HSP 1 Score: 675.2 bits (1741), Expect = 7.1e-191 Identity = 363/437 (83.07%), Postives = 389/437 (89.02%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. NCBI nr
Match: gi|823123762|ref|XP_012477310.1| (PREDICTED: bystin [Gossypium raimondii]) HSP 1 Score: 521.5 bits (1342), Expect = 1.3e-144 Identity = 284/438 (64.84%), Postives = 344/438 (78.54%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. NCBI nr
Match: gi|296086673|emb|CBI32308.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 519.2 bits (1336), Expect = 6.5e-144 Identity = 269/425 (63.29%), Postives = 329/425 (77.41%), Query Frame = 1
BLAST of Cp4.1LG17g10340 vs. NCBI nr
Match: gi|225436863|ref|XP_002272540.1| (PREDICTED: bystin-like [Vitis vinifera]) HSP 1 Score: 517.3 bits (1331), Expect = 2.5e-143 Identity = 269/434 (61.98%), Postives = 330/434 (76.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |