Cp4.1LG17g07220 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTCGCTAAAGCTCCAGAAGCGGCTCGCCGCCAGTGTCCTCAAGTGCGGGAAAGGCAAGGTCTGGCTCGATCCCAATGAGGTCAACGAAATCTCCATGGCGAACTCTCGTACGCTTTCTCCATCTATGTTCACTTAGATTCTATCTATGTTCAATCTCCATGTTGTTGCTTGAAGTTTTCTGTTCTTTTGATTTCACGATCTGAAGATTTTTCTGTGTCCCTTAGGTTTTCTAGATGAAATACGTTTTCGGATCTGAAAATTTTGCTCTAGGTTAAGTCTGGAACTGTGATTCCTTGTTGTTTTTCTTGGTTATGGTAATTATACTATGTTGTTTCCGTCGTCGTTAGTTGAAACGCTAGTTAATCCCTTGGCTGAATGATTTGCAGTAGATTGCTAGGAGATGATATCATTGAGTTGCATAGGAAATTGCTGTTATTGAACAAAATTTTTGTGATTTGTTTACGTTTTAAAAAACTATTTCCTCTCAGATTCTTCGCATAGCGAGGAAGGCACTTTCGCCATGGAGTTTGTATCGCTTTTACGCCTTGTTACACTTCCAAATTCCACAAGCTCTATCTTCTGTCGGGAGCAATGTTTATTTTTAATATGTTATTACTGATATGTAACTACTGATTTTTAGCAAAAATGTTGTCATTTTGTGATCTTTCGTACCTGATTTACAAATAATACTGTTTGTGACTCAGTTGCTAATTAATGTCTGGATTGTTGAGTACAGGCCAAAATATTAGGAAGTTGGTCAAGGATGGTTTCGTCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGCCGTATGAAAGAGGCTAAGAGAAAGGGTCGACACTCTGGATATGGTACTTTTCTTCTGAAGCCTTGATTTATGTATATATTATAGAGAAGCTTTATGGTGTTTAATCTTATTTTAGTACTCCCTGTGCATTTATCACTGTTTTTTGCCCTTTTAGACACAAAGTCAAGAACTTGATGAGCACTATTCTGTTTTTGTACTAAAATTCACAGTTTAAACCTTATTCAGGTAAGAGAAAGGGTACCAGGGAGGCAAGGTTGCCGACCAAGATCCTCTGGATGCGGAGAATGCGTGTTCTCAGGAGATTGCTCCGCAAATATAGAGAATCCAAGAAGATCGACAAGCATATGTATCATGACATGTACATGAAAGTTAAGGGTAATGTCTTTAAGAACAAGCGTGTGTTGATGGAGAGCATCCACAAGTCGAAGGCCGAGAAGGCAAGAGAGAAGACATTGTCAGACCAATTCGAGGCTAAGAGGGCCAAGAACAAAGCCAGCAGGGAAAGGAAGTTTGCTCGTAGGGAGGAACGATTGGCACAGGTTTCTAACTCTTGACTATTACCAACGTAATGTTTGTACCTTCTATGCTGTTGTAATTCGTGTTTGTTCGATGTTATAGGGACCTGGGGAGAAACAACCACCCGCGACATCGGCAGCCCAACCTGCTGCTCAATCTACTCAGTAAGCATCAATCGTGATAATCTATGTAAATCTATCTTCATTTTGCGAGATACTAAGTATCGGTTCATTATGTGCAGGCCATCGAAGAAATCGAAGAAGTGAGAATTTTACAAAGGAGCATCATAGGGGAAGGTTTACTTCTGATGGCACCATTATTCTAGAGTAGTAGTGTTTTGAGGAGGGCTTTTGCAGCTTTTTTGTTCAGTTTGGACCTTGTTACTTCATCATGTCGAAGACACCAAGGATTTTAAGCCTGGTAATTTTGTTAGTTTATGTTCATTGTTTTTTGTCAACCGTGTTTGNGCTGTTATTGAACAAAATTTTTGTGATTTGTTTACGTTTTAAAAAACTATTTCCTCTCAGATTCTTCGCATAGCGAGGAAGGCACTTTCGCCATGGAGTTTGTATCGCTTTTACGCCTTGTTACACTTCCAAATTCCACAAGCTCTATCTTCTGTCGGGAGCAATGTTTATTTTTAATATGTTATTACTGATATGTAACTACTGATTTTTAGCAAAAATGTTGTCATTTTGTGATCTTTCGTACCTGATTTACAAATAATACTGTTTGTGACTCAGTTGCTAATTAATGTCTGGATTGTTGAGTACAGGCCAAAATATTAGGAAGTTGGTCAAGGATGGTTTCGTCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGCCGTATGAAAGAGGCTAAGAGAAAGGGTCGACACTCTGGATATGGTACTTTTCTTCTGAAGCCTTGATTTATGTATATATTATAGAGAAGCTTTATGGTGTTTAATCTTATTTTAGTACTCCCTGTGCATTTATCACTGTTTTTTGCCCTTTTAGACACAAAGTCAAGAACTTGATGAGCACTATTCTGTTTTTGTACTAAAATTCACAGTTTAAACCTTATTCAGGTAAGAGAAAGGGTACCAGGGAGGCAAGGTTGCCGACCAAGATCCTCTGGATGCGGAGAATGCGTGTTCTCAGGAGATTGCTCCGCAAATATAGAGAATCCAAGAAGATCGACAAGCATATGTATCATGACATGTACATGAAAGTTAAGGGTAATGTCTTTAAGAACAAGCGTGTGTTGATGGAGAGCATCCACAAGTCGAAGGCCGAGAAGGCAAGAGAGAAGACATTGTCAGACCAATTCGAGGCTAAGAGGGCCAAGAACAAAGCCAGCAGGGAAAGGAAGTTTGCTCGTAGGGAGGAACGATTGGCACAGGTTTCTAACTCTTGACTATTACCAACGTAATGTTTGTACCTTCTATGCTGTTGTAATTCGTGTTTGTTCGATGTTATAGGGACCTGGGGAGAAACAACCACCCGCGACATCGGCAGCCCAACCTGCTGCTCAATCTACTCAGTAAGCATCAATCGTGATAATCTATGTAAATCTATCTTCATTTTGCGAGATACTAAGTATCGGTTCATTATGTGCAGGCCATCGAAGAAATCGAAGAAGTGA ATGGTTTCGCTAAAGCTCCAGAAGCGGCTCGCCGCCAGTGTCCTCAAGTGCGGGAAAGGCAAGGTCTGGCTCGATCCCAATGAGGTCAACGAAATCTCCATGGCGAACTCTCGCCAAAATATTAGGAAGTTGGTCAAGGATGGTTTCGTCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGCCGTATGAAAGAGGCTAAGAGAAAGGGTCGACACTCTGGATATGGTAAGAGAAAGGGTACCAGGGAGGCAAGGTTGCCGACCAAGATCCTCTGGATGCGGAGAATGCGTGTTCTCAGGAGATTGCTCCGCAAATATAGAGAATCCAAGAAGATCGACAAGCATATGTATCATGACATGTACATGAAAGTTAAGGGTAATGTCTTTAAGAACAAGCGTGTGTTGATGGAGAGCATCCACAAGTCGAAGGCCGAGAAGGCAAGAGAGAAGACATTGTCAGACCAATTCGAGGCTAAGAGGGCCAAGAACAAAGCCAGCAGGGAAAGGAAGTTTGCTCGTAGGGAGGAACGATTGGCACAGGGACCTGGGGAGAAACAACCACCCGCGACATCGGCAGCCCAACCTGCTGCTCAATCTACTCACTTTTTTGTTCAGTTTGGACCTTGTTACTTCATCATGTCGAAGACACCAAGGATTTTAAGCCTGATTCTTCGCATAGCGAGGAAGGCACTTTCGCCATGGAGCCAAAATATTAGGAAGTTGGTCAAGGATGGTTTCGTCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGCCGTATGAAAGAGGCTAAGAGAAAGGGTCGACACTCTGGATATGGTAAGAGAAAGGGTACCAGGGAGGCAAGGTTGCCGACCAAGATCCTCTGGATGCGGAGAATGCGTGTTCTCAGGAGATTGCTCCGCAAATATAGAGAATCCAAGAAGATCGACAAGCATATGTATCATGACATGTACATGAAAGTTAAGGGTAATGTCTTTAAGAACAAGCGTGTGTTGATGGAGAGCATCCACAAGTCGAAGGCCGAGAAGGCAAGAGAGAAGACATTGTCAGACCAATTCGAGGCTAAGAGGGCCAAGAACAAAGCCAGCAGGGAAAGGAAGTTTGCTCGTAGGGAGGAACGATTGGCACAGGGACCTGGGGAGAAACAACCACCCGCGACATCGGCAGCCCAACCTGCTGCTCAATCTACTCAGCCATCGAAGAAATCGAAGAAGTGA ATGGTTTCGCTAAAGCTCCAGAAGCGGCTCGCCGCCAGTGTCCTCAAGTGCGGGAAAGGCAAGGTCTGGCTCGATCCCAATGAGGTCAACGAAATCTCCATGGCGAACTCTCGCCAAAATATTAGGAAGTTGGTCAAGGATGGTTTCGTCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGCCGTATGAAAGAGGCTAAGAGAAAGGGTCGACACTCTGGATATGGTAAGAGAAAGGGTACCAGGGAGGCAAGGTTGCCGACCAAGATCCTCTGGATGCGGAGAATGCGTGTTCTCAGGAGATTGCTCCGCAAATATAGAGAATCCAAGAAGATCGACAAGCATATGTATCATGACATGTACATGAAAGTTAAGGGTAATGTCTTTAAGAACAAGCGTGTGTTGATGGAGAGCATCCACAAGTCGAAGGCCGAGAAGGCAAGAGAGAAGACATTGTCAGACCAATTCGAGGCTAAGAGGGCCAAGAACAAAGCCAGCAGGGAAAGGAAGTTTGCTCGTAGGGAGGAACGATTGGCACAGGGACCTGGGGAGAAACAACCACCCGCGACATCGGCAGCCCAACCTGCTGCTCAATCTACTCACTTTTTTGTTCAGTTTGGACCTTGTTACTTCATCATGTCGAAGACACCAAGGATTTTAAGCCTGATTCTTCGCATAGCGAGGAAGGCACTTTCGCCATGGAGCCAAAATATTAGGAAGTTGGTCAAGGATGGTTTCGTCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGCCGTATGAAAGAGGCTAAGAGAAAGGGTCGACACTCTGGATATGGTAAGAGAAAGGGTACCAGGGAGGCAAGGTTGCCGACCAAGATCCTCTGGATGCGGAGAATGCGTGTTCTCAGGAGATTGCTCCGCAAATATAGAGAATCCAAGAAGATCGACAAGCATATGTATCATGACATGTACATGAAAGTTAAGGGTAATGTCTTTAAGAACAAGCGTGTGTTGATGGAGAGCATCCACAAGTCGAAGGCCGAGAAGGCAAGAGAGAAGACATTGTCAGACCAATTCGAGGCTAAGAGGGCCAAGAACAAAGCCAGCAGGGAAAGGAAGTTTGCTCGTAGGGAGGAACGATTGGCACAGGGACCTGGGGAGAAACAACCACCCGCGACATCGGCAGCCCAACCTGCTGCTCAATCTACTCAGCCATCGAAGAAATCGAAGAAGTGA MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPGEKQPPATSAAQPAAQSTHFFVQFGPCYFIMSKTPRILSLILRIARKALSPWSQNIRKLVKDGFVIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPGEKQPPATSAAQPAAQSTQPSKKSKK
BLAST of Cp4.1LG17g07220 vs. Swiss-Prot
Match: RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana GN=RPL19A PE=2 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 6.5e-88 Identity = 177/200 (88.50%), Postives = 188/200 (94.00%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. Swiss-Prot
Match: RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.9e-87 Identity = 176/200 (88.00%), Postives = 184/200 (92.00%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. Swiss-Prot
Match: RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana GN=RPL19C PE=2 SV=3) HSP 1 Score: 323.6 bits (828), Expect = 3.2e-87 Identity = 177/206 (85.92%), Postives = 190/206 (92.23%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. Swiss-Prot
Match: RL19_DROME (60S ribosomal protein L19 OS=Drosophila melanogaster GN=RpL19 PE=1 SV=2) HSP 1 Score: 243.8 bits (621), Expect = 3.3e-63 Identity = 129/182 (70.88%), Postives = 153/182 (84.07%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. Swiss-Prot
Match: RL19_RAT (60S ribosomal protein L19 OS=Rattus norvegicus GN=Rpl19 PE=1 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.4e-61 Identity = 126/181 (69.61%), Postives = 151/181 (83.43%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. TrEMBL
Match: W9SA46_9ROSA (Ribosomal protein L19 OS=Morus notabilis GN=L484_007486 PE=3 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 1.1e-94 Identity = 192/202 (95.05%), Postives = 196/202 (97.03%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. TrEMBL
Match: A0A166D927_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_005783 PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 4.2e-94 Identity = 189/202 (93.56%), Postives = 196/202 (97.03%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. TrEMBL
Match: A0A022PXD8_ERYGU (Ribosomal protein L19 OS=Erythranthe guttata GN=MIMGU_mgv1a013756mg PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 7.2e-94 Identity = 190/202 (94.06%), Postives = 194/202 (96.04%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. TrEMBL
Match: B9SAV9_RICCO (Ribosomal protein L19 OS=Ricinus communis GN=RCOM_1179520 PE=3 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 1.2e-93 Identity = 192/203 (94.58%), Postives = 196/203 (96.55%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. TrEMBL
Match: F6HZ71_VITVI (Ribosomal protein L19 OS=Vitis vinifera GN=VIT_07s0005g00840 PE=3 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 2.1e-93 Identity = 191/199 (95.98%), Postives = 194/199 (97.49%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. TAIR10
Match: AT1G02780.1 (AT1G02780.1 Ribosomal protein L19e family protein) HSP 1 Score: 325.9 bits (834), Expect = 3.7e-89 Identity = 177/200 (88.50%), Postives = 188/200 (94.00%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. TAIR10
Match: AT3G16780.1 (AT3G16780.1 Ribosomal protein L19e family protein) HSP 1 Score: 324.3 bits (830), Expect = 1.1e-88 Identity = 176/200 (88.00%), Postives = 184/200 (92.00%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. TAIR10
Match: AT4G02230.1 (AT4G02230.1 Ribosomal protein L19e family protein) HSP 1 Score: 323.6 bits (828), Expect = 1.8e-88 Identity = 177/206 (85.92%), Postives = 190/206 (92.23%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. TAIR10
Match: AT4G16030.1 (AT4G16030.1 Ribosomal protein L19e family protein) HSP 1 Score: 75.9 bits (185), Expect = 6.6e-14 Identity = 66/137 (48.18%), Postives = 79/137 (57.66%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. NCBI nr
Match: gi|449436477|ref|XP_004136019.1| (PREDICTED: 60S ribosomal protein L19-1 [Cucumis sativus]) HSP 1 Score: 367.5 bits (942), Expect = 3.1e-98 Identity = 197/202 (97.52%), Postives = 200/202 (99.01%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. NCBI nr
Match: gi|659101337|ref|XP_008451555.1| (PREDICTED: 60S ribosomal protein L19-1-like [Cucumis melo]) HSP 1 Score: 364.4 bits (934), Expect = 2.6e-97 Identity = 195/202 (96.53%), Postives = 199/202 (98.51%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. NCBI nr
Match: gi|703125875|ref|XP_010103417.1| (60S ribosomal protein L19-2 [Morus notabilis]) HSP 1 Score: 355.1 bits (910), Expect = 1.6e-94 Identity = 192/202 (95.05%), Postives = 196/202 (97.03%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. NCBI nr
Match: gi|1021047166|gb|KZN04946.1| (hypothetical protein DCAR_005783 [Daucus carota subsp. sativus]) HSP 1 Score: 353.2 bits (905), Expect = 6.1e-94 Identity = 189/202 (93.56%), Postives = 196/202 (97.03%), Query Frame = 1
BLAST of Cp4.1LG17g07220 vs. NCBI nr
Match: gi|848920247|ref|XP_012857054.1| (PREDICTED: 60S ribosomal protein L19-1-like [Erythranthe guttata]) HSP 1 Score: 352.4 bits (903), Expect = 1.0e-93 Identity = 190/202 (94.06%), Postives = 194/202 (96.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |