Cp4.1LG16g04780 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTAAGAAACAAGGGTGAACTAATTGATAAGCGTATGCTTTCGAGAGGTGGAGGGAGGCGGGGGCTGAGACATATACATGAAGAAAGAAAAACCCCCGACAGCTACGGAAGCGGCTGCTTGATAGGGCCGCGATTGGTTTCGATCTCTTACACACAGAGACGATTCAAACTCACAAATACTTCGATCCCAGAAATTGCAAATTCCACCTGCTCACCCCGAAACCGAAGAAATGTCTCTCCTATTCCATTTCCCCTATCCATTTTTCTCCTCTGCTTCCCGTTGTTTCCCCTTCTCAATCCTTTTTCCTGTGGCGCCCACCGCCCGGACCCACTCATCACGACGGCCAAGGCTTCCACCACCGCCGTCGCACTGCTCTGCCCACTTCTTTCCTCAGATGCCGTAGTGGGTACTGTTCTTTTTCCCTCTTTGCTTTCTTTTTGGTTGCCTTTTTGTCGTTTTATCTTTTCCCAATTTTTCAATGCTCATGATTTCTCTCTACTTATTTACAATTGAATGTTATGCCTAAGAGATCCCTTTAATCGCGCTTGTAAATCTAATCTATCCATTTTGTTCTTGTTCTGTTTCTTCTTCAAATGCCTCACTCTTTAGTCCTCTTAGCTTCCCCATTTCTGTATGTGTGTCTGTTGCACCTCTTTTGTGATAAAATTGAAAGAGGGAATGATTTCTGGTTGAACTATACAATGAGAGAGTTATTTTTGGCGTTCGCGTGATGCATTCATAGTTGATTTTGGTTCCTTAATGAGATTCCGGAGGAGAAGACAATGCTTTCCATCTTGTTCTTCCCTCCACGAAGTAATCCACCTATCAATCTCTATTGATTTATTAATGTGTTGATCATTCCAAATTTGCTGGGAACATCCACTCTCTGATTGTCTGCTTAGTCCTGTTCGTTATGTGAAGGGAGTATCATTTTTCTATGTTGTTGATATCTGTTGTGTGCCTTTGGTGAAACTATGTGTTCTTTCTGCCAATCATTTTACTGACAGTGAATTCTAAAAATTGTTATAGGTTGATGAAGATGAAATATATTGGAGACGTAGAAGAGGTGACGAAGAGTTAGAATGGTCACATAGTTCCACCCATGTAATTTTAAAGCTAGCTCAATGTTTTAGTGAGTAGAGCTTTGTTTGAATCTCCTTTTGTGGTGTAGAGATTAACTTCTAGAATTGTGACTTTTTGGAATTTACTTTTGCTGTCTCATTATCACCCTCTTGCTTACAAATTAGCTTGTGGTAAATGTAGCTAATGCTATGGTTGGACCACGATCATGGATCGGAGGAATCTTCAATCGCTCTGGCAATAAAAAAAACGATAAGTTTCAATACCCTTTGAGTCCTCGTCAGGTAATTAACGTCAATAATGTGTTGGTAGTCTGTGTACTGTGTCTCATTCATTGGCTTTATTTGTGTTGCATTATTCTACTAGTGGTATGGTTTGTAAGTGTGAGGAAAGCTTTACCTCTTGTGCGTGAAAAGGCATTGGCACCAATCAGTGGGACTGTAGTATTGTCTGCTTTGGCCCGTTACGTATCGCCGTCAGCCTCGCGGTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCATACCCTTATAAGGACTGTTTCGTTTCCGACTAAAGAACAGATTTTGAGCTTTGCACATCCCCTTTCTCTCCACCTACCTATAGACCTTAGCTTAAGGACACGTTTTAGCTTCGTACGCCCCCTTTCTCTCCACCTTTCTATAGATCATGCATGTAATAGAACTAGAACCTTGTGTTTCTATCAACATAACTTTCTCCAACAGGTTGTAAGTTTATATCTCCACCCCTAACATCTGATGTAATGTTCTTAAAACAATATATTCTCATGTGATTGCGAGAATGTCTATATGCATGGATTATGGAACCTTATATTTGTTTGATTGATTCTTTTACGCCCTCAGTTTATTAATTTAAAACTCGTCGTCCCCTTTTCATTGGATGAGACGTTCTAATGTTCAAGTAAATATAGTTATATTTAAGACCATTTTTCTAATGGCTTGTTGATAGGGGTGTATGAAGGTTGAGCATGTATGTTCTAACATGTGATTTATTCTACCAGGAGGAAAGGCTTCAGAGGCTACAAGACCGAATTCATATACCTTATGATGAGATGTGCATTGAGCATCAAGTACTTACAAGATCCCGTTTAAGCACTTATGATGAGATGTTCTAACATGTGCATTAAGCGCTCTTAGATGAGTCTAAGCAACGAACTCACTGCATTTTTCGTCATTGACAAGATCCCGTTTTAGAAGCCCAAAACCTCGTCCTTGATTTGAGTTTTCATCTATTTGAATTTTGAATAAGGCCATCATTCATGTCTTTCATTTCTACTGCATGCAGACAGCTAGAAGTTTAACGTTTTCCCATTTATGCTTTGTTTTCATCATCTGTGAGCACAAGTAACCATCCTTCATTATTTATAGGAAGCTCTGAGGGCATTGTGGGATGTTGCCTTTCCAGATGTTGAGCTTAAAGGGTTGATATCTGAGCAATGGAAAGAAATGGGTTGGCAAGGTGCTAATCCATCCACTGACTTTAGGTATAATCCAAGCCACCATTTCAATGTATATTCTTTGTTGTCTTACCTCTTATTAATGGTGATAGTGAAGTAAATGTTGAGGCTTGTTTTAATTTTTACAAAGACTTAAGATTTAAGCAACCCATCTAAAATATAGTTTGAAGACTAGAGCTATCATAGGAGATGAGCAACGGTATTTGTAACAGCCCAAGCTCACCGCTAACAAATATTATCCTTTTTGGGCTTTCCCTTCAAGGTTTTTAGAACGCGTCATCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTCTGTTCCTCTCTCCAACTGTTGTGTGATCTCACAATCCACCCTCCTTCGGGGCCTAGTGTCCTCGCTAGCACTCGTTCTTCTCTCCAATCAACGTGGGATCTCACAATCCAACTGTAACGCCCCTAATTTTCTTAGCCTAAATTAGTGGCGTTACAAATTGTATTAGAGCCAGACACCGGGCGGTGTACCAACAAGGACTTTGGGTCTCGAAGGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGGGAACAAAGCTTTTTTTTGTAAGGGTGTGGAAACCTCTATCTAGTAGACATGTTTTAAAAACCTTGTGGGGAAGCCCAAAGAAAACAATATCTGCTAGCGGTGGGTTTAGGCTGTTAGGTTAGATGTGAGAAGCATGCATGCAAGCGTGCTTAGAGAGAATGAGCGTGTGAGACAGTGCAGTGCACACACGTGCGTACATCTGCCGAAGATTGAGGGAGGAATTCATTTTCTTCTAAATGCATTACACTTTAGTGAATTGGTAAAAAGAAACTGTTCATATGTTAGCTGAATACTGTGTTTTTTATACTTAAAAATCAAATATTTTCTCACAGTTGGCTGCTTTTCTTAGGGGTTGCGGTTTCATTTCCCTTGAAAACTTGCTGTTTTTTTCCAGGACATTTCCGGTATGTCCTATTCTGTTGTATCACTCCCACAATGAGATATTCCATGTTCTTGTTTTTTCATTTCCTTAATGCGTGAGTGAGTTATCACTAATCTCATACAAATTCAAAATGAAGGCATCTTTTCGTAGGTTATTATCGAAGGAAGGTGGCAATCGAGCAACTTGGGAATATCCGTTTGCTGTTGCTGGCATTAACATATCGTATATGTTGATTCAAATGTTGGATTTAAAATCAGGTATGTATCTGCATTTTTCGACTCGAATAGTTCGCTTTAATAATGGGAATGATCTCTGCAGCAGGTCTTGTTACCATGAACCCAACAAAATATGTACAAAACCAATAACAAAGAACATGATTTTAAAGCCTTCTCGAAATCAACTCTGTCTAATACGTTCCCATCCCAGCCACTAAAAATTCTTGTCATCTCATCTCTTGTGTACAGCAAAGCCAAAGTGTATTCCAGGACTCAATTTTATGAGACTATTAGGAGGTACTGACTATCCCCATCCATCATTTTGGTTTTTACTTGGACATATCACACATGTTTTCATTACTAAACTTCTGTAACGCTCACACAATACACACTGTTAACTCGTAGCAGAAAACGAAGAAGCATTCGACATTCTATTCTGCGTAACTTTCGAATTGATGGATGCTCAATGGCTTGCCATGCATGCTTCCTACATGGAGTTCAATGTATTCTCTCCTCTCAATCTCACACACACTAACACTATCGTCATCGTCGTCGTGTACCCAAAACTTTTGTTGAAGCTTTTGATACTCGTGATTGTTACAGGAGGTCCTGCAAGTAACCAGAGAACAGCTGGAAAGAGAGCTATCTCTAGAGGATATTCACAGAATAGAAGACTTACCAGCTTATAATCTGTTGCTTCTGTAGTTACGTTGTCCCTGAAAGATTGTATACTGAACAATGGCAGCCAGTTTCAGAGAGTGCTTTGAGTTTGAACTTGAAAACCCACCATTGACCACTGTATGCATTATTATAGAGATCATAGAAAATCATTATGAAGTTAATCTTAGTTTTTTTTTTTTTTTTTTGTATGATTTTATACTCTTCGAAAAGAAGAAATAGTGATGTATAAGACGCCGTTGTTGTAAGTTGTCGTGACTATGTATTGTCATAACTCTCGTTTAGTTCCTAACTCTTGATGATTCATATTCTCGTTTATTCATAACCATTTTGATTCATTTAGTCGGGAACAGGGGAAGAAGTCTATCCCAACATCTATCTATAGATATTTATGGTGGTACGTGACTGGCTAAATTGAAAAATATTAATTAAAATATTAATTTAA CGTAAGAAACAAGGGTGAACTAATTGATAAGCGTATGCTTTCGAGAGGTGGAGGGAGGCGGGGGCTGAGACATATACATGAAGAAAGAAAAACCCCCGACAGCTACGGAAGCGGCTGCTTGATAGGGCCGCGATTGGTTTCGATCTCTTACACACAGAGACGATTCAAACTCACAAATACTTCGATCCCAGAAATTGCAAATTCCACCTGCTCACCCCGAAACCGAAGAAATGTCTCTCCTATTCCATTTCCCCTATCCATTTTTCTCCTCTGCTTCCCGTTGTTTCCCCTTCTCAATCCTTTTTCCTGTGGCGCCCACCGCCCGGACCCACTCATCACGACGGCCAAGGCTTCCACCACCGCCGTCGCACTGCTCTGCCCACTTCTTTCCTCAGATGCCGTAGTGGGTTGATGAAGATGAAATATATTGGAGACGTAGAAGAGGTGACGAAGAGTTAGAATGGTCACATAGTTCCACCCATGTAATTTTAAAGCTAGCTCAATGTTTTACTAATGCTATGGTTGGACCACGATCATGGATCGGAGGAATCTTCAATCGCTCTGGCAATAAAAAAAACGATAAGTTTCAATACCCTTTGAGTCCTCGTCAGGTAATTAACGTCAATAATGTGTTGGTAGTCTGTGTACTGTGTCTCATTCATTGGCTTTATTTGTGTTGCATTATTCTACTAGTGGTATGGTTTGTAAGTGTGAGGAAAGCTTTACCTCTTGTGCGTGAAAAGGCATTGGCACCAATCAGTGGGACTGTAGTATTGTCTGCTTTGGCCCGTTACGTATCGCCGTCAGCCTCGCGGTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCATACCCTTATAAGGACTGTTTCGTTTCCGACTAAAGAACAGATTTTGAGCTTTGCACATCCCCTTTCTCTCCACCTACCTATAGACCTTAGCTTAAGGACACGTTTTAGCTTCGTACGCCCCCTTTCTCTCCACCTTTCTATAGATCATGCATGTAATAGAACTAGAACCTTGTGTTTCTATCAACATAACTTTCTCCAACAGGTTGTAAGTTTATATCTCCACCCCTAACATCTGATGTAATGTTCTTAAAACAATATATTCTCATGTGATTGCGAGAATGTCTATATGCATGGATTATGGAACCTTATATTTGTTTGATTGATTCTTTTACGCCCTCAGTTTATTAATTTAAAACTCGTCGTCCCCTTTTCATTGGATGAGACGTTCTAATGTTCAAGTAAATATAGTTATATTTAAGACCATTTTTCTAATGGCTTGTTGATAGGGGTGTATGAAGGTTGAGCATGTATGTTCTAACATGTGATTTATTCTACCAGGAGGAAAGGCTTCAGAGGCTACAAGACCGAATTCATATACCTTATGATGAGATGTGCATTGAGCATCAAGAAGCTCTGAGGGCATTGTGGGATGTTGCCTTTCCAGATGTTGAGCTTAAAGGGTTGATATCTGAGCAATGGAAAGAAATGGGTTGGCAAGGTGCTAATCCATCCACTGACTTTAGGTTATTATCGAAGGAAGGTGGCAATCGAGCAACTTGGGAATATCCGTTTGCTGTTGCTGGCATTAACATATCGTATATGTTGATTCAAATGTTGGATTTAAAATCAGCAAAGCCAAAGTGTATTCCAGGACTCAATTTTATGAGACTATTAGGAGAAAACGAAGAAGCATTCGACATTCTATTCTGCGTAACTTTCGAATTGATGGATGCTCAATGGCTTGCCATGCATGCTTCCTACATGGAGTTCAATGAGGTCCTGCAAGTAACCAGAGAACAGCTGGAAAGAGAGCTATCTCTAGAGGATATTCACAGAATAGAAGACTTACCAGCTTATAATCTGTTGCTTCTGTAGTTACGTTGTCCCTGAAAGATTGTATACTGAACAATGGCAGCCAGTTTCAGAGAGTGCTTTGAGTTTGAACTTGAAAACCCACCATTGACCACTGTATGCATTATTATAGAGATCATAGAAAATCATTATGAAGTTAATCTTAGTTTTTTTTTTTTTTTTTTGTATGATTTTATACTCTTCGAAAAGAAGAAATAGTGATGTATAAGACGCCGTTGTTGTAAGTTGTCGTGACTATGTATTGTCATAACTCTCGTTTAGTTCCTAACTCTTGATGATTCATATTCTCGTTTATTCATAACCATTTTGATTCATTTAGTCGGGAACAGGGGAAGAAGTCTATCCCAACATCTATCTATAGATATTTATGGTGGTACGTGACTGGCTAAATTGAAAAATATTAATTAAAATATTAATTTAA ATGTATGTTCTAACATGTGATTTATTCTACCAGGAGGAAAGGCTTCAGAGGCTACAAGACCGAATTCATATACCTTATGATGAGATGTGCATTGAGCATCAAGAAGCTCTGAGGGCATTGTGGGATGTTGCCTTTCCAGATGTTGAGCTTAAAGGGTTGATATCTGAGCAATGGAAAGAAATGGGTTGGCAAGGTGCTAATCCATCCACTGACTTTAGGTTATTATCGAAGGAAGGTGGCAATCGAGCAACTTGGGAATATCCGTTTGCTGTTGCTGGCATTAACATATCGTATATGTTGATTCAAATGTTGGATTTAAAATCAGCAAAGCCAAAGTGTATTCCAGGACTCAATTTTATGAGACTATTAGGAGAAAACGAAGAAGCATTCGACATTCTATTCTGCGTAACTTTCGAATTGATGGATGCTCAATGGCTTGCCATGCATGCTTCCTACATGGAGTTCAATGAGGTCCTGCAAGTAACCAGAGAACAGCTGGAAAGAGAGCTATCTCTAGAGGATATTCACAGAATAGAAGACTTACCAGCTTATAATCTGTTGCTTCTGTAG MYVLTCDLFYQEERLQRLQDRIHIPYDEMCIEHQEALRALWDVAFPDVELKGLISEQWKEMGWQGANPSTDFRLLSKEGGNRATWEYPFAVAGINISYMLIQMLDLKSAKPKCIPGLNFMRLLGENEEAFDILFCVTFELMDAQWLAMHASYMEFNEVLQVTREQLERELSLEDIHRIEDLPAYNLLLL
BLAST of Cp4.1LG16g04780 vs. Swiss-Prot
Match: ELMOA_DICDI (ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 4.3e-18 Identity = 54/191 (28.27%), Postives = 88/191 (46.07%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. Swiss-Prot
Match: ELMOC_DICDI (ELMO domain-containing protein C OS=Dictyostelium discoideum GN=elmoC PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 7.0e-13 Identity = 50/182 (27.47%), Postives = 89/182 (48.90%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. Swiss-Prot
Match: ELMOB_DICDI (ELMO domain-containing protein B OS=Dictyostelium discoideum GN=elmoB PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 5.0e-11 Identity = 46/181 (25.41%), Postives = 83/181 (45.86%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. Swiss-Prot
Match: ELMO3_BOVIN (Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.1e-10 Identity = 49/192 (25.52%), Postives = 88/192 (45.83%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. Swiss-Prot
Match: ELMO3_RAT (Engulfment and cell motility protein 3 OS=Rattus norvegicus GN=Elmo3 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10 Identity = 49/192 (25.52%), Postives = 86/192 (44.79%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. TrEMBL
Match: A0A0A0KD30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128640 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 4.2e-81 Identity = 147/200 (73.50%), Postives = 167/200 (83.50%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. TrEMBL
Match: V7AGI8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G113500g PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 2.8e-77 Identity = 135/177 (76.27%), Postives = 160/177 (90.40%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. TrEMBL
Match: D7TEH4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g01740 PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 6.3e-77 Identity = 140/200 (70.00%), Postives = 164/200 (82.00%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. TrEMBL
Match: B9I668_POPTR (Phagocytosis and cell motility protein ELMO1 OS=Populus trichocarpa GN=POPTR_0013s13980g PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 1.7e-74 Identity = 136/199 (68.34%), Postives = 161/199 (80.90%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. TrEMBL
Match: A0A067JJT2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25819 PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 8.5e-74 Identity = 135/201 (67.16%), Postives = 163/201 (81.09%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. TAIR10
Match: AT1G03620.1 (AT1G03620.1 ELMO/CED-12 family protein) HSP 1 Score: 276.2 bits (705), Expect = 1.5e-74 Identity = 134/201 (66.67%), Postives = 160/201 (79.60%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. TAIR10
Match: AT2G44770.1 (AT2G44770.1 ELMO/CED-12 family protein) HSP 1 Score: 234.6 bits (597), Expect = 5.1e-62 Identity = 116/200 (58.00%), Postives = 142/200 (71.00%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. TAIR10
Match: AT3G60260.1 (AT3G60260.1 ELMO/CED-12 family protein) HSP 1 Score: 233.4 bits (594), Expect = 1.1e-61 Identity = 113/200 (56.50%), Postives = 143/200 (71.50%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. TAIR10
Match: AT3G03610.1 (AT3G03610.1 ELMO/CED-12 family protein) HSP 1 Score: 226.1 bits (575), Expect = 1.8e-59 Identity = 114/200 (57.00%), Postives = 139/200 (69.50%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. TAIR10
Match: AT1G67400.1 (AT1G67400.1 ELMO/CED-12 family protein) HSP 1 Score: 218.8 bits (556), Expect = 2.9e-57 Identity = 105/200 (52.50%), Postives = 144/200 (72.00%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. NCBI nr
Match: gi|778712894|ref|XP_011656955.1| (PREDICTED: ELMO domain-containing protein A isoform X2 [Cucumis sativus]) HSP 1 Score: 308.9 bits (790), Expect = 6.0e-81 Identity = 147/200 (73.50%), Postives = 167/200 (83.50%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. NCBI nr
Match: gi|778712890|ref|XP_011656954.1| (PREDICTED: ELMO domain-containing protein A isoform X1 [Cucumis sativus]) HSP 1 Score: 308.9 bits (790), Expect = 6.0e-81 Identity = 147/200 (73.50%), Postives = 167/200 (83.50%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. NCBI nr
Match: gi|731409634|ref|XP_010657264.1| (PREDICTED: ELMO domain-containing protein A isoform X3 [Vitis vinifera]) HSP 1 Score: 308.1 bits (788), Expect = 1.0e-80 Identity = 140/177 (79.10%), Postives = 164/177 (92.66%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. NCBI nr
Match: gi|659094846|ref|XP_008448272.1| (PREDICTED: ELMO domain-containing protein A isoform X4 [Cucumis melo]) HSP 1 Score: 306.2 bits (783), Expect = 3.9e-80 Identity = 146/200 (73.00%), Postives = 166/200 (83.00%), Query Frame = 1
BLAST of Cp4.1LG16g04780 vs. NCBI nr
Match: gi|659094840|ref|XP_008448269.1| (PREDICTED: ELMO domain-containing protein A isoform X1 [Cucumis melo]) HSP 1 Score: 306.2 bits (783), Expect = 3.9e-80 Identity = 146/200 (73.00%), Postives = 166/200 (83.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |