Cp4.1LG12g06870 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGCTATACTTTCCGCGAGATGATCGTGAGCTCATTTACTTGATAATAATCATGGGCCAGCCCATTATAACGGATAGGATTACTGGACCACGAGGCCCAATTCAGCTACGGCCCAATTCAGCTACGGCCCATATAACGAAGAGAGTTGCGCATTTATTTGCTATTTCAAAAGAAAAAGGCAGAAAAAATCCTCAAAGTTTCCAATTCAGCTGTGAAATTCATGGCAGCTGATAGACAGTCCCAGGGATTTCAATTTGGTCTCTCGCACATCTCAAAAGGCCACTCCTTGTCTCCTTCCCCTTTTCCTTCATTTTTTTTTAGGCAGGCCGCCGCCACTCCTTTCCTTTTGCCTTCTCATCTTCCTCAAAGTCCATGTGTTAGAGCCGTAGAGCCACAGGCTTCCTCTCATTTATCCCATATTTATTCCCCTTCCGGACATCGCTTTTTCCCACTTTCTCCTTCGCCATGGCTCGTGTTTGCGACCTACAGTCTCTTTCATCGCTATTTGCGTCTCGCCCAACAATACCCAGATCCTCAAATTTCAAACCCATTTGTTCTTTTCACTGCTCTTCTTCTTCTTCGCCATTTACCGAGAAACATTCCGTGAAGAGATACCAAAGAGACGATTGGCTGTACAAGAACCAAGCGGATGAAAGTTCTGTTGCTTCATCGTGTTCTATTCCGTCTGATTCTGAGTCTATACGGCAGAATGACATTGCCTTGCAGCTGCCGGAGCTGAAGAAATTGCTGCAGGTGCTGAGGGAAAAGAGGGCAAGTAGTGGTTGCGATGATGGGAAATGTGGGCCGGGGAATGTGTTTTTGGTGGGGACTGGCCCTGGAGATCCTGAGCTTTTGACATTGAAGGCGGTGAAAGTGATTCAGAGTGCTGATTTGCTTTTGTATGATCGATTGGTTTCTAATGATGTGTTGGATTTGGTGGGTTCTGATGCTAGGCTTCTCTATGTGGGGAAGACGGCTGGTTTCCATAGCAGAACCCAGGTGAGCTTTTTCTTCTGAAAATCTCTACTTAATATGGGTTTGGTTTGGCTTTTTTTGAGATTGTTGCTGAATGGGTATTTGTTTAGGAGGAGATTCATGAGTTACTTCTGAACTTTGCTGAAGCTGGAGCTACAGTTGTGAGGCTTAAAGGAGGAGACCCTCTTGTAAGTGTGCATTTCGAATGGCTCATTCAAATGATTTTTAGTGATGCATCCTGAAAATTCTGTTGTTTGTATTCCTTTTAGGTGTTTGGAAGGGGTGGGGAGGAGATGGATTTCTTGCAACAGCAAGGGATTCAAGTCAAAATTGTTCCTGGTAAGTGCATTTCTGAATTCTGTTCTTCAGTCCCTTCAGAAGTGGATGGACCATATTAGGTTAGAATGTAACACCTGTTTGGGATGGCTAAAGTCGTAGGGAAGGCACTCGTAGGTCCTTGCTCCCAGCGAGGCTTACGTTCTAACACATCGACGTAGAGCATTTCTATGAGATCCCACATTGGTGGGGAGGGGAACGAAGCATTCTTTATAAGGACGTGGAAATCTCTCCCTAGCATATACGTTTATAACCTTGAGGGGGAGCTCAAAAGGGAAAGCCTAAAGAGAATAACATCGGTTAGCGGTACCTATTTTCTGTTCTTGCTCCTTCCAAACGAAGAGAATGGAGTGATATTAAGTTATGTGGAATAGAACCAGGAGTAAGAAATTAGGTAAGATGGGCTCGAGTACCTGAGGACGATTTGGTTACAAGGTCTCTTGAATTCGCTTCGTGCTCGTAATCAATCATTGAACTGTCATTAACATATCACATTCTGATTGCCAATGCACCACCAGTTTAAGGAAACTACTCTTAAGAGTAACCTTTGTTTCCCTTGCAGGGATAACTGCGGCTTCGGGTATAGCTGCTGAATTGGGAATTCCTTTGACACACAGGGGCGTTGCGACAAGTGTCAGGTTCCTCACTGGTCACTCGAGACAGGGTGGAACGGATCCTCTATTTGTGGCAGAGAATGCAGCTGATCCAGATTCAACTCTGGTGGTATACATGGGTCTATCAACTCTTCCATCTCTGGCCCTTAAGTTGATGCATCATGGTCTGCCCCCTGATACCCCAGCTGCTGCCATTGAACGAGGGACAACACCCCAACAAAGAATAGTAAGCACAATTCTCTGCTGCCTTCAACTTTTGTTCTGAGTTGGGTAGGGTTCAACCAAACACTCTTAACGTGTCGGTTCGTTACCATTCTAGCAAATCTACTTAAACCAGGAGATCTCTCTGCGTTGAGCTACTTTTTCAGTGACATCTGGATCTAGACTTTAATATCAAGGGGGCAGGGCATACTTTCACTTAAGTCTTTTCATTTCATCTTGGTCGTGCCTTGAACAAATCTTGCTTGGATCTATTCCATTTGTGCAGGTTTTTGCAGAACTGAAGGATCTTGCAGATGAAATCAAAGCAGCAGAGTTGGTTTCACCTACTTTGATTATAATTGGAAAAGTGGTTTCTCTCTCACCACATTGGTCACTTTCCTCCAAAGAAGCCTCCAGTTTGGTGGAGGCTTAACTGAGTTAAAAGTGTCTACAAAAGGTTACAGGAATAGTTCTTCATTCTGTCGCTTAAAAAGCTCTGGACGTCGAGTTTTTCCACAAGATCTTGTCGATTTTGTGGAGAAAAACATTGAAACCATGACAGAGCAGAAAAAGAAGAATAGGGGACTCGTCTTTCTGTTCTGCATTTTATTGGTCTGCCCATTGCCTTCAAATGGCTGGACTCGGGTTTTCTGCGAAGGACGGGAGTGATGCAGTGGTTTTCCTCCTTGGATGCTACTACCGGAGCACGGTGAGCAGCATCTCCTCATACCATTTCTTGCATTGATTGAAATAGAACCTCCAAACTTCAATTTTTTCTTAGTTCATGTTCATGAGGCCTCTGGTGCAATGAGATTACTTTATCACCAACCAATGTATTGTAGAATTGTCTTTTATCTTGAGTAGAACTTCTACAAATAACAAAGAAATACAGACTACGAACGGCAAGCTCGTAAATATTGTAGAACTTCACCTCAAATATGACCTCATAGTTCCTGCAGTCTGGATTTGTGAATAATAAGGTTTCACTCCAAATGTCATTAAAAAAAACATATATACGATATTCTAATCACTACTCCATAATCTCTCCTTCCTCCAGTTCTTCAACTCCCTTGGAAAAGTCTCCTTCCCAATCAAGAAAATCATCTGGATTGATTTGTGCCATGATATTTGAGTAAGTATCTATCAGATCTTGCTCAAAATCAAACTCCAATCCTTTCGAAACCGCTATCTCCTCGGCCTGGGAGCTTGAATTCGGGCCATTCCCAAACTCATGCTTCCCCATCAAATCT CGGCTATACTTTCCGCGAGATGATCGTGAGCTCATTTACTTGATAATAATCATGGGCCAGCCCATTATAACGGATAGGATTACTGGACCACGAGGCCCAATTCAGCTACGGCCCAATTCAGCTACGGCCCATATAACGAAGAGAGTTGCGCATTTATTTGCTATTTCAAAAGAAAAAGGCAGAAAAAATCCTCAAAGTTTCCAATTCAGCTGTGAAATTCATGGCAGCTGATAGACAGTCCCAGGGATTTCAATTTGGTCTCTCGCACATCTCAAAAGGCCACTCCTTGTCTCCTTCCCCTTTTCCTTCATTTTTTTTTAGGCAGGCCGCCGCCACTCCTTTCCTTTTGCCTTCTCATCTTCCTCAAAGTCCATGTGTTAGAGCCGTAGAGCCACAGGCTTCCTCTCATTTATCCCATATTTATTCCCCTTCCGGACATCGCTTTTTCCCACTTTCTCCTTCGCCATGGCTCGTGTTTGCGACCTACAGTCTCTTTCATCGCTATTTGCGTCTCGCCCAACAATACCCAGATCCTCAAATTTCAAACCCATTTGTTCTTTTCACTGCTCTTCTTCTTCTTCGCCATTTACCGAGAAACATTCCGTGAAGAGATACCAAAGAGACGATTGGCTGTACAAGAACCAAGCGGATGAAAGTTCTGTTGCTTCATCGTGTTCTATTCCGTCTGATTCTGAGTCTATACGGCAGAATGACATTGCCTTGCAGCTGCCGGAGCTGAAGAAATTGCTGCAGGTGCTGAGGGAAAAGAGGGCAAGTAGTGGTTGCGATGATGGGAAATGTGGGCCGGGGAATGTGTTTTTGGTGGGGACTGGCCCTGGAGATCCTGAGCTTTTGACATTGAAGGCGGTGAAAGTGATTCAGAGTGCTGATTTGCTTTTGTATGATCGATTGGTTTCTAATGATGTGTTGGATTTGGTGGGTTCTGATGCTAGGCTTCTCTATGTGGGGAAGACGGCTGGTTTCCATAGCAGAACCCAGGAGGAGATTCATGAGTTACTTCTGAACTTTGCTGAAGCTGGAGCTACAGTTGTGAGGCTTAAAGGAGGAGACCCTCTTGTGTTTGGAAGGGGTGGGGAGGAGATGGATTTCTTGCAACAGCAAGGGATTCAAGTCAAAATTGTTCCTGGGATAACTGCGGCTTCGGGTATAGCTGCTGAATTGGGAATTCCTTTGACACACAGGGGCGTTGCGACAAGTGTCAGGTTCCTCACTGGTCACTCGAGACAGGGTGGAACGGATCCTCTATTTGTGGCAGAGAATGCAGCTGATCCAGATTCAACTCTGGTGGTATACATGGGTCTATCAACTCTTCCATCTCTGGCCCTTAAGTTGATGCATCATGGTCTGCCCCCTGATACCCCAGCTGCTGCCATTGAACGAGGGACAACACCCCAACAAAGAATAGTTTTTGCAGAACTGAAGGATCTTGCAGATGAAATCAAAGCAGCAGAGTTGGTTTCACCTACTTTGATTATAATTGGAAAAGTGGTTTCTCTCTCACCACATTGGTCACTTTCCTCCAAAGAAGCCTCCAGTTTGGTGGAGGCTTAACTGAGTTAAAAGTGTCTACAAAAGGTTACAGGAATAGTTCTTCATTCTGTCGCTTAAAAAGCTCTGGACGTCGAGTTTTTCCACAAGATCTTGTCGATTTTGTGGAGAAAAACATTGAAACCATGACAGAGCAGAAAAAGAAGAATAGGGGACTCGTCTTTCTGTTCTGCATTTTATTGGTCTGCCCATTGCCTTCAAATGGCTGGACTCGGGTTTTCTGCGAAGGACGGGAGTGATGCAGTGGTTTTCCTCCTTGGATGCTACTACCGGAGCACGGTGAGCAGCATCTCCTCATACCATTTCTTGCATTGATTGAAATAGAACCTCCAAACTTCAATTTTTTCTTAGTTCATGTTCATGAGGCCTCTGGTGCAATGAGATTACTTTATCACCAACCAATGTATTGTAGAATTGTCTTTTATCTTGAGTAGAACTTCTACAAATAACAAAGAAATACAGACTACGAACGGCAAGCTCGTAAATATTGTAGAACTTCACCTCAAATATGACCTCATAGTTCCTGCAGTCTGGATTTGTGAATAATAAGGTTTCACTCCAAATGTCATTAAAAAAAACATATATACGATATTCTAATCACTACTCCATAATCTCTCCTTCCTCCAGTTCTTCAACTCCCTTGGAAAAGTCTCCTTCCCAATCAAGAAAATCATCTGGATTGATTTGTGCCATGATATTTGAGTAAGTATCTATCAGATCTTGCTCAAAATCAAACTCCAATCCTTTCGAAACCGCTATCTCCTCGGCCTGGGAGCTTGAATTCGGGCCATTCCCAAACTCATGCTTCCCCATCAAATCT ATGGCTCGTGTTTGCGACCTACAGTCTCTTTCATCGCTATTTGCGTCTCGCCCAACAATACCCAGATCCTCAAATTTCAAACCCATTTGTTCTTTTCACTGCTCTTCTTCTTCTTCGCCATTTACCGAGAAACATTCCGTGAAGAGATACCAAAGAGACGATTGGCTGTACAAGAACCAAGCGGATGAAAGTTCTGTTGCTTCATCGTGTTCTATTCCGTCTGATTCTGAGTCTATACGGCAGAATGACATTGCCTTGCAGCTGCCGGAGCTGAAGAAATTGCTGCAGGTGCTGAGGGAAAAGAGGGCAAGTAGTGGTTGCGATGATGGGAAATGTGGGCCGGGGAATGTGTTTTTGGTGGGGACTGGCCCTGGAGATCCTGAGCTTTTGACATTGAAGGCGGTGAAAGTGATTCAGAGTGCTGATTTGCTTTTGTATGATCGATTGGTTTCTAATGATGTGTTGGATTTGGTGGGTTCTGATGCTAGGCTTCTCTATGTGGGGAAGACGGCTGGTTTCCATAGCAGAACCCAGGAGGAGATTCATGAGTTACTTCTGAACTTTGCTGAAGCTGGAGCTACAGTTGTGAGGCTTAAAGGAGGAGACCCTCTTGTGTTTGGAAGGGGTGGGGAGGAGATGGATTTCTTGCAACAGCAAGGGATTCAAGTCAAAATTGTTCCTGGGATAACTGCGGCTTCGGGTATAGCTGCTGAATTGGGAATTCCTTTGACACACAGGGGCGTTGCGACAAGTGTCAGGTTCCTCACTGGTCACTCGAGACAGGGTGGAACGGATCCTCTATTTGTGGCAGAGAATGCAGCTGATCCAGATTCAACTCTGGTGGTATACATGGGTCTATCAACTCTTCCATCTCTGGCCCTTAAGTTGATGCATCATGGTCTGCCCCCTGATACCCCAGCTGCTGCCATTGAACGAGGGACAACACCCCAACAAAGAATAGTTTTTGCAGAACTGAAGGATCTTGCAGATGAAATCAAAGCAGCAGAGTTGGTTTCACCTACTTTGATTATAATTGGAAAAGTGGTTTCTCTCTCACCACATTGGTCACTTTCCTCCAAAGAAGCCTCCAGTTTGGTGGAGGCTTAA MARVCDLQSLSSLFASRPTIPRSSNFKPICSFHCSSSSSPFTEKHSVKRYQRDDWLYKNQADESSVASSCSIPSDSESIRQNDIALQLPELKKLLQVLREKRASSGCDDGKCGPGNVFLVGTGPGDPELLTLKAVKVIQSADLLLYDRLVSNDVLDLVGSDARLLYVGKTAGFHSRTQEEIHELLLNFAEAGATVVRLKGGDPLVFGRGGEEMDFLQQQGIQVKIVPGITAASGIAAELGIPLTHRGVATSVRFLTGHSRQGGTDPLFVAENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPDTPAAAIERGTTPQQRIVFAELKDLADEIKAAELVSPTLIIIGKVVSLSPHWSLSSKEASSLVEA
BLAST of Cp4.1LG12g06870 vs. Swiss-Prot
Match: CYSG_THISH (Siroheme synthase OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) GN=cysG PE=3 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 5.0e-63 Identity = 125/252 (49.60%), Postives = 170/252 (67.46%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. Swiss-Prot
Match: CYSG2_AERHH (Siroheme synthase 2 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240) GN=cysG2 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 4.2e-62 Identity = 132/252 (52.38%), Postives = 172/252 (68.25%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. Swiss-Prot
Match: CYSG_ALCBS (Siroheme synthase OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) GN=cysG PE=3 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.2e-61 Identity = 120/239 (50.21%), Postives = 162/239 (67.78%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. Swiss-Prot
Match: CYSG_ACIAD (Siroheme synthase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=cysG PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 2.1e-61 Identity = 124/237 (52.32%), Postives = 163/237 (68.78%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. Swiss-Prot
Match: CYSG_SACD2 (Siroheme synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=cysG PE=3 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 4.7e-61 Identity = 119/235 (50.64%), Postives = 166/235 (70.64%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. TrEMBL
Match: A0A0A0KBI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428980 PE=3 SV=1) HSP 1 Score: 664.8 bits (1714), Expect = 5.9e-188 Identity = 340/372 (91.40%), Postives = 355/372 (95.43%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. TrEMBL
Match: A0A067L4S5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16709 PE=3 SV=1) HSP 1 Score: 568.2 bits (1463), Expect = 7.5e-159 Identity = 300/370 (81.08%), Postives = 323/370 (87.30%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. TrEMBL
Match: M5XJY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007378mg PE=3 SV=1) HSP 1 Score: 565.1 bits (1455), Expect = 6.4e-158 Identity = 298/372 (80.11%), Postives = 326/372 (87.63%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. TrEMBL
Match: A0A061E3C5_THECC (Urophorphyrin methylase 1 isoform 1 OS=Theobroma cacao GN=TCM_005935 PE=3 SV=1) HSP 1 Score: 560.8 bits (1444), Expect = 1.2e-156 Identity = 295/366 (80.60%), Postives = 320/366 (87.43%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. TrEMBL
Match: F6HB92_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g01470 PE=3 SV=1) HSP 1 Score: 556.2 bits (1432), Expect = 3.0e-155 Identity = 292/374 (78.07%), Postives = 319/374 (85.29%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. TAIR10
Match: AT5G40850.1 (AT5G40850.1 urophorphyrin methylase 1) HSP 1 Score: 522.3 bits (1344), Expect = 2.4e-148 Identity = 274/347 (78.96%), Postives = 295/347 (85.01%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. NCBI nr
Match: gi|659122650|ref|XP_008461254.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase [Cucumis melo]) HSP 1 Score: 669.8 bits (1727), Expect = 2.6e-189 Identity = 342/372 (91.94%), Postives = 355/372 (95.43%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. NCBI nr
Match: gi|449436257|ref|XP_004135909.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase [Cucumis sativus]) HSP 1 Score: 664.8 bits (1714), Expect = 8.5e-188 Identity = 340/372 (91.40%), Postives = 355/372 (95.43%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. NCBI nr
Match: gi|802555565|ref|XP_012065508.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase [Jatropha curcas]) HSP 1 Score: 568.2 bits (1463), Expect = 1.1e-158 Identity = 300/370 (81.08%), Postives = 323/370 (87.30%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. NCBI nr
Match: gi|645250692|ref|XP_008231328.1| (PREDICTED: uroporphyrinogen-III C-methyltransferase [Prunus mume]) HSP 1 Score: 566.6 bits (1459), Expect = 3.1e-158 Identity = 299/372 (80.38%), Postives = 326/372 (87.63%), Query Frame = 1
BLAST of Cp4.1LG12g06870 vs. NCBI nr
Match: gi|596001275|ref|XP_007218151.1| (hypothetical protein PRUPE_ppa007378mg [Prunus persica]) HSP 1 Score: 565.1 bits (1455), Expect = 9.1e-158 Identity = 298/372 (80.11%), Postives = 326/372 (87.63%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |