Cp4.1LG11g11910 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAATTTAATTTTAATTTTAATTTTAATTTTAATTTTTTGTTCCCTCTCCTTTGAGAGAGAGAGAGAGTAAGAGGCGCCCAATCTTCAAAACCGCAACTGTAAGAACTCTCTCCTGCTACTGGATTTTCTTGGGCGTTCGGTTTTGATTTGCTGGTGCCTTTCTTCTCCATTGGTAATCAACCATTGCAGAAGTGCCTTTCTTGTTCTTCTGATGCTTTTCACTCTGCGTTTCTTCTTTCTTCCGTTTTCGATTTCCATAACCATTTCTCGCTGTTTGTTTCTTCTTTTCTGAATTCAGCGGACTTGGATTCCAGAAAACATGGATGGGGGAGTAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGGGACTTTAAGGGCCGTCGTGCTGGAATGATTAGAGCTCTCACCACCGGTCTTGTTCAATCTCACTTTTCCTTCTCCTCCTCATCTATTTCTGTCTTTTTGTTTTCAATTTTTAGGGTTCTTCTACCAGGCTTTCATGGCGCTTTACATTTCTAGTTAATTACTCTTCTCTCTTGCCATCTTTTTGCAGATGTCGTGGAATTTTATCAGCTTTGCGACCCTGGTCTGAGCTCCATTCTTTGCATTCTTTCTATTTTACCTAACTTGTGGGTTTTCGTTTACTTGCAATTGCGGTTTGATAGTCAACACTGTACTTTATGTGTGTTAATTAATATTGTTTTGAAATCTTCTCTGTGGGGTATTCTCTTGATTCGTGAATTTTTGGTAATGAAAAAGACACGGTTACTTATTACTACTGATAGTGAGAGCCTCTAATTTGGTGAGATTTCAAAGAGCCACCTGCTTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACATTGTAGCTGGAATCTGAGTTTTACCAGCTTTTTCATTAGTTATTTTGTTGGCAACNTGAGATTTCAAAGAGCCACCTGCTTCACACACACACACACACTCACATACACATTGTAGCTGGAATCTGAGTTTTACCAGCTTTTTCATTAGTTATTTTGTTGGCATCATATTTAAAGACGTTGTGAAATGTGAATGATACTTTAAATTTTGTTTGTAATCTCCAACTGTAGTTTCCAAGCTGGAATGTAGCAAGTTATTGTTATGCTTATTGGGACTTCAGTAGGNGTGAATGATACTTTAAATTTTGTTTGTAATCTCCAACTGTAGCTTCCAAGCTGGAATGTAGCAAGTTATTGTTATTGTTATTGGGACTTCAGTAGCTAGGAAGTTGGTGACATAAATACGTGCTTAGCTATGAATTTTCTTCGTACTTTCTGTTCTTGGCCACTCGAAGAATAAATGCAGTAAACATTGGGGACCCAATTACTTTTTTTAATAGCACTCCATGTAGCTATTTCTGCTTTTACGGACATCAGTGAACTTTTCAACTATTTACACAGCTGTTTCAAATTTCAGAGAAGGAAAACCTCTGCCTATATGGACTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCGGAAGAAGTACCTCCAGAGGTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAAAAAAGGATTGGCTATCCCTTGTTGCCGTTCATAGTGACGCATGGCTTCTTGCTGTGGCTTTCTATTTTGGTTCTAGATTTGGCTGTGATAAATCTGACAGGTACTTTCTGAACTAAATTTCCTGGCTGTCGCTGCCGCTGCGGCACCACAGTTACTTGTTACTACGTGTATGGCTTCGGTTTTGAAAATACAAAAGTTGTCTCTGATATTTAAAAAGGAAAAGGAAAACAAATTATTAGTTGTGCAGAGCGGTACTCTGATGTCTGGCATATCTCTTTATTAATTATGCATCTACCCGTTCTTTGAAGACTTCACAATATGGAGACTGACTGGTGGGCCATTAATCTTTATGTGTATAAGTGTTGCATTTTAACTGATAAATTTGGGTTAAATTGGTAAGATTATGAAGGCTTAAGTAAATCCTTGTGTTTCTCTTACAAAAAGATCAAAGAAATGTAGGCTTGGGAAAAAAGACACAAATTCATGCATTTTGTTTCTCGAAGTGTGATCATTTTCTCTTGTTNAAATCCTTGTGTTTCTCTTACAAAAAGATCAAAGAAATGTAGCTTGGGAAAAAAGACTCAAATTCATGCATTTTGTTTCTCGAAGTGTGATCATTTTCTCTTGTTCATATCATTATTTGCTAATTTTGTAGAATTGATTCATGATTCAGGAAACGCCTCTTTACGATGATAAATGATCTGCCCACTATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATTGGTTTCAAATAACAGCAGCAGCAAATCCAGGACTGGCCCAAAGGGGGTAAAAAGAATTTTCTGTATCTTATTTCATTTTCATTCGTGAACAATGACATATGTCTCAATTGAGTTTGATGAAGAATTTTGGACCTTAGTGCTCGCAATCAGATAGTTTGGTACCCTATGCAATTGTTCTCACTTCAAGAACAGTAAACAGAATATAAGAGAAATTTACAAAGGAAAAAGAAAAGTTGAGAAAGTATCTGGACTTGCTTCTAAATCGCTATGCAGTAAATATTAGTTTCAGAAGCAAGGCATTGATGTGCACATTATTTATTTTGAAAACTAAGTCTTTGAATTTCAATGCATTACTCCTGATGGATTTATCTACAGCTCTATATGTCCAGTCGGTTTTCGTTATATATATGATCTTTTGACTGTATAACATTTGTTTAACTAATNATGGATTTATCTACAGCTCTATATGTCCAGTCGGTTTTCGTTCTATATATGATCTTTTGACTGGATAACATTTGTTTAACTAATTTTTTTTTTAACAAAATTAACATTATTAACAGAGAGATTCTGAATCAAGCAAGTTGTCTAATGGGTTGGCAAAAGATGAAGACGAGGGACTGAATGAGGAAGCTGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCATCGGACGAGTTTTGGATATGTTGTGACATATGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCCGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGGGCACGGCCCTGATAATGATGGGTATCTCGTTAATTTTATTCATGTTGGATTAAGCTAACTTGTAGTCAGTCCAATATTAATCCATGTCCCCCCAGGGTATGTACTAATTGCGTTGGCTGGAATCTTATTTATTCGGATAACTTACAGGCTATTAAATGTATTCTATGTAATTCCCAACTGAGATACACAGATTGTTCTATATGTGCGAACCTGTCGGCTATGGAATCTGAAACACTATAATTTATCTTGTTTAATTGTTTCTG TTAATTTAATTTTAATTTTAATTTTAATTTTAATTTTTTAGAGAGAGTAAGAGGCGCCCAATCTTCAAAACCGCAACTGTAAGAACTCTCTCCTGCTACTGGATTTTCTTGGGCGTTCGGTTTTGATTTGCTGAATTCAGCGGACTTGGATTCCAGAAAACATGGATGGGGGAGTAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGGGACTTTAAGGGCCGTCGTGCTGGAATGATTAGAGCTCTCACCACCGATGTCGTGGAATTTTATCAGCTTTGCGACCCTGAGAAGGAAAACCTCTGCCTATATGGACTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCGGAAGAAGTACCTCCAGAGGTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAAAAAAGGATTGGCTATCCCTTGTTGCCGTTCATAGTGACGCATGGCTTCTTGCTGTGGCTTTCTATTTTGGTTCTAGATTTGGCTGTGATAAATCTGACAGGAAACGCCTCTTTACGATGATAAATGATCTGCCCACTATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATTGGTTTCAAATAACAGCAGCAGCAAATCCAGGACTGGCCCAAAGGGGAGAGATTCTGAATCAAGCAAGTTGTCTAATGGGTTGGCAAAAGATGAAGACGAGGGACTGAATGAGGAAGCTGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCATCGGACGAGTTTTGGATATGTTGTGACATATGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCCGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGGGCACGGCCCTGATAATGATGGGTATCTCGTTAATTTTATTCATGTTGGATTAAGCTAACTTGTAGTCAGTCCAATATTAATCCATGTCCCCCCAGGGTATGTACTAATTGCGTTGGCTGGAATCTTATTTATTCGGATAACTTACAGGCTATTAAATGTATTCTATGTAATTCCCAACTGAGATACACAGATTGTTCTATATGTGCGAACCTGTCGGCTATGGAATCTGAAACACTATAATTTATCTTGTTTAATTGTTTCTG ATGGATGGGGGAGTAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGGGACTTTAAGGGCCGTCGTGCTGGAATGATTAGAGCTCTCACCACCGATGTCGTGGAATTTTATCAGCTTTGCGACCCTGAGAAGGAAAACCTCTGCCTATATGGACTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCGGAAGAAGTACCTCCAGAGGTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAAAAAAGGATTGGCTATCCCTTGTTGCCGTTCATAGTGACGCATGGCTTCTTGCTGTGGCTTTCTATTTTGGTTCTAGATTTGGCTGTGATAAATCTGACAGGAAACGCCTCTTTACGATGATAAATGATCTGCCCACTATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATTGGTTTCAAATAACAGCAGCAGCAAATCCAGGACTGGCCCAAAGGGGAGAGATTCTGAATCAAGCAAGTTGTCTAATGGGTTGGCAAAAGATGAAGACGAGGGACTGAATGAGGAAGCTGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCATCGGACGAGTTTTGGATATGTTGTGACATATGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCCGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGGGCACGGCCCTGA MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEVNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKDEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP
BLAST of Cp4.1LG11g11910 vs. Swiss-Prot
Match: ALFL4_ARATH (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana GN=AL4 PE=1 SV=2) HSP 1 Score: 416.4 bits (1069), Expect = 2.2e-115 Identity = 198/254 (77.95%), Postives = 220/254 (86.61%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. Swiss-Prot
Match: ALFL5_ARATH (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana GN=AL5 PE=2 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 4.1e-109 Identity = 186/260 (71.54%), Postives = 222/260 (85.38%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. Swiss-Prot
Match: ALFL3_ARATH (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana GN=AL3 PE=1 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 7.7e-108 Identity = 183/251 (72.91%), Postives = 213/251 (84.86%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. Swiss-Prot
Match: ALFL6_ARATH (PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 1.4e-101 Identity = 181/258 (70.16%), Postives = 215/258 (83.33%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. Swiss-Prot
Match: ALFL8_ORYSJ (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica GN=Os11g0244800 PE=2 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 4.1e-101 Identity = 180/255 (70.59%), Postives = 207/255 (81.18%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. TrEMBL
Match: B9RK32_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1046170 PE=4 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 2.3e-127 Identity = 219/251 (87.25%), Postives = 233/251 (92.83%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. TrEMBL
Match: A0A067KCL5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07453 PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 2.0e-126 Identity = 218/251 (86.85%), Postives = 234/251 (93.23%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. TrEMBL
Match: A0A061GLQ4_THECC (ALF domain class transcription factor isoform 1 OS=Theobroma cacao GN=TCM_037580 PE=4 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 1.2e-123 Identity = 216/252 (85.71%), Postives = 232/252 (92.06%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. TrEMBL
Match: I1LY29_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G107700 PE=4 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 1.6e-123 Identity = 213/251 (84.86%), Postives = 230/251 (91.63%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. TrEMBL
Match: A0A0B2PF47_GLYSO (PHD finger protein ALFIN-LIKE 5 OS=Glycine soja GN=glysoja_032469 PE=4 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 1.6e-123 Identity = 213/251 (84.86%), Postives = 230/251 (91.63%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. TAIR10
Match: AT5G26210.1 (AT5G26210.1 alfin-like 4) HSP 1 Score: 416.4 bits (1069), Expect = 1.3e-116 Identity = 198/254 (77.95%), Postives = 220/254 (86.61%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. TAIR10
Match: AT5G20510.1 (AT5G20510.1 alfin-like 5) HSP 1 Score: 395.6 bits (1015), Expect = 2.3e-110 Identity = 186/260 (71.54%), Postives = 222/260 (85.38%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. TAIR10
Match: AT3G42790.1 (AT3G42790.1 alfin-like 3) HSP 1 Score: 391.3 bits (1004), Expect = 4.3e-109 Identity = 183/251 (72.91%), Postives = 213/251 (84.86%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. TAIR10
Match: AT2G02470.1 (AT2G02470.1 alfin-like 6) HSP 1 Score: 370.5 bits (950), Expect = 7.9e-103 Identity = 181/258 (70.16%), Postives = 215/258 (83.33%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. TAIR10
Match: AT1G14510.1 (AT1G14510.1 alfin-like 7) HSP 1 Score: 355.5 bits (911), Expect = 2.6e-98 Identity = 171/243 (70.37%), Postives = 203/243 (83.54%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. NCBI nr
Match: gi|255546033|ref|XP_002514076.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 [Ricinus communis]) HSP 1 Score: 463.0 bits (1190), Expect = 3.3e-127 Identity = 219/251 (87.25%), Postives = 233/251 (92.83%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. NCBI nr
Match: gi|802628213|ref|XP_012077002.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Jatropha curcas]) HSP 1 Score: 459.9 bits (1182), Expect = 2.8e-126 Identity = 218/251 (86.85%), Postives = 234/251 (93.23%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. NCBI nr
Match: gi|743905127|ref|XP_011045957.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 [Populus euphratica]) HSP 1 Score: 456.1 bits (1172), Expect = 4.1e-125 Identity = 214/251 (85.26%), Postives = 231/251 (92.03%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. NCBI nr
Match: gi|1009143505|ref|XP_015889300.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 [Ziziphus jujuba]) HSP 1 Score: 450.7 bits (1158), Expect = 1.7e-123 Identity = 215/252 (85.32%), Postives = 232/252 (92.06%), Query Frame = 1
BLAST of Cp4.1LG11g11910 vs. NCBI nr
Match: gi|590575538|ref|XP_007012714.1| (ALF domain class transcription factor isoform 1 [Theobroma cacao]) HSP 1 Score: 450.7 bits (1158), Expect = 1.7e-123 Identity = 216/252 (85.71%), Postives = 232/252 (92.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |