Cp4.1LG11g09710 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTAAGCCCAAAGAGTCAATTTCGCGTTTGAAGTAAACTCTCCATTTCCCTCTCTCGAGCTTTTCTTCCTCTCTGCGAAAAAATGTCAGAAGCCACAATAACGATCCTGGACGGCACGCAGCTAAGATCCATCGACCTCTCTCTGTCCTTCTCCGATCGTAGTGTCACCGGAGCTCAGGTCCTTGACCTTGCCGATTCCTCCGTCTCCTCGTCTCTGTTCGGGATCGCCTTGTCGGAGACTCTCAGATCATCTGCTCTTAATCGCATTGGCTTCCACGACATTGTTGCTTTCCGACGATCGGAGCTCACTCGTGAACGAGCCTCTGAGATTCTGAAGGACTATGTAGCTGCGATCGCCGATGGTTTACGAGGTATCTTGTTTTCTCGTGTTTGTATGGTGTCTTAGTGCGTAATGTTCGTGAATTTCGTTATCGGAGCTCTTGGCAGCTCATCAGGAAGTACGATTGAGTGTTGTGTTTTTTTTTTTTTTTTTTTAATCATGAATTTGACATTTTAGATCTTGCGAATAGTGAATTAGACTGTGAAGGATGAACAGAAAAGTAAGGAGAAATTGTTTCAGCATGATGAAATTGAACTGATGGATTAAATGTTGGTTGTTTAACTGGATTCCAAGCATGTGTAGGTCGTTGATTGCCAATATGAACTAGATAATCCGCTCAAAAGTTATAATCTGATATTTTAGATATATATACACCTTGGTACAAATATCATGTATCTGTCTGGTTCAACCATTTTAGTCTAGTAGAATGATCGAGGATTACCTAGATAACTGTGTATTATGAACGATCTGTTGGATATTTATTTCTCTTTGTTTTATTTCTATAGCAAGAAAACGTTACTAATAAATTTTTGTTTTCCCAGATGATCCTGTTGTAGTGTCAATTTTGGATGGGAACAATCTGCGTGTTTTCTTAGATGATGAAGATGATTTTGCAATGCTAGCCGAGACCCTTTTCACTGATTTAGATACAGAAGATAAAGGAAAGATCAAGAAGAGTGAGGTTAAAAATGCTCTTATCCACATGGGGGTTGAAACGGGTGTACCACCTCTCTCAGGTTTATTCATATTTTACTTTCCTCCTTTTCTCCTTTTTTCCTTTTTTCTTATTTAATTTTTGGTAACGTACTTTCAATTTTTACTTGGTCTATGTCTTTAGCTGAGAATTGTCTTGTACACGCATCTACAACGAATTTATTTGCAAGTTGGTCTTCCTGCCTTTGTTTGTGGAATTTTTCAAAAATTTCTGCTCAATTATATCCACTGTTTCATGTGTTCAACATATCATGTTTAAAACTCCCCTACATAAGCTTCTGCGAGGATATTTTGAATCTCCTCTTAGTGGTACAGTAGCTAGCTACATAGAGCTATTATACTGGTACAAGTCTATAACTATTTGCTGAAAAAACATACTTCCTCACATGTTTATCACGACTATGAATGCTTTCCACGTTAAATGTATGGAAGAATTTCTAGAATGTTGTAATACATTACGGAGATGCAGATCAGACTCATTTTCCTAACTTGGAAATGGTTTTCAAACAACTTTTCTCTATTATGACTTAAGGAACTTTAGTTTTGAGCATTTGTTCTATTTTTTAACTGATTAGTAAAAGGACCCTACTTCACATTTGAAGTGATAACCTGTGTGCATTTGCAACGAACTTCTCTTTGTAACATACCAGTGATGAAACAGAATATCCTTTGCTGAGCGACATCTTGCAAAAACACGAAGTGGAGAGCAGCAATGAATTGGGCCAAGCTCAATTTGCAGAAGTGCTTCAGCCTGTCCTTCAAGAGTTAGCAGATACTCTTGCAAAAAAGCCTTATGTTTTCATTCGAAGTATCAAGGTCGCTAATGGAGCTCAGATAAAAAAGGTAAATCGGTACCTTTCCTTTTCTTCCTTGGACATACCCTTCAATGATATCTTCCCCTTGACATCGGGAATTGGGAAGTGTTGTAAACCCTTTTTTTGTGAGAAACTTTGAAAGTGTAGTAAACCCTTAATACCATCATTAGCATATTTTCTTAGATAAGTTTACTGGCCTGGTTTATCTGCATCCGACATTTTACGTACTAGAAGGATTACACCCATCAAATTGTGGATTCATTAATTTTGGAAATTTTAACATTATACTATCAGTAACAGGCACTGACAAAAAATGGGTAAGCCCCGACCTGTAGTTTCTTTTCCCCTCAAGTTCTGCACTTTGTTGACTAGCTTCTGGATCTTAGAACTATCCACTGCACTTAATACCATGTGAAATTGTTGTTATTATTTTATGCTCGAGGAAAATATTCTTTCTGTTGGTCTTATGATGATAGATACCACTGATTGCAGTGAGCTAGTTCTCTGGAGTCGAAGTATATCAATTTATGTCTGATCCTTCACATATAGTTTCCTTCAACCATATTCTCTTCATGAACTAGAGCCAATCCTAGAGCCAATCCTAATTGATCTTGTAAGAGACATGCTATTGAACAAATCTGTTTTTCAAATGATTTANAGCTGGAGCTTCTAACTATGATGAATGCGCCGCTAACTATGGATATGATGCCGGAAATAGACCGATTTTATATCACCCTTCAATTCGAATTAGCAAAAGCAATGTCTCCTTGCATAATATGGATTCCAAACATTCATGATCTGGATGTGAATGCGTCGAATTACTTATCCCTTGGTCTATTAATGAACTATCTCTCTAGGGATTGTGGATTGTGAAAGATGTTCCACTAGAAATATTCTATTCTGACCTGCACTTCAGATATTGTAAACTGAATGTATATATACACAGTGAGATCTGGTAGTTTTCTTCTTTGTGATGAAGTTTTATTTTCATCTAATCTACTCTAGTGAATAGTGACTTGCATGACTTCTTACTACTATTTGGGAACTATGAATACTTTTGAAAATATTGTAATTCCTGATGTGAGTTGCAGCTTTTGGCTGACGAGAAGCAATTCAGCAATGTCATAGAAAAGCTCTGGCAGTGGCAGGGAACCCATAAAGAAGAGGATGAGGTAACAACTTTGCAAAAAATCAGGAATTACTTCGAAAAAGAATGGAGGGAACTGGGCTTACCACCTACAGAAGCCAATGATGCCATGGTTCTTCTCTATGATGCAATATTTGCTGATATAGCGAAGGAGAAGTGTGGTTCGATATCTGAAAAAAATCAAGTTGAAAAACTTGCGAAGGAGATTTTGGAGATATTTGTGGAGCAGCTTGAAGCCAGTCCTGTGTATTATGATTGTGACCCCAAATGAGCAAGGTGACCATGTTACATCTGAAGCTCGCGTCATCACTTACGGAATCGGTCGTTTCTTCGATCATCATTCTCTTATGATCAGGTACGAGCATTTAAGAGTAAAGTAATTATGATATCAAACTCCTTTGGGCTAGCATGTTATCCTGAAACATAGTCATGTTCATTATATACCATACTGAATTTGGAGCCCCTTGAAGTGGCCAATAGTTTTATACCATGACATACAGAATCAGAATAAAATGTATCATTCAGATGGGATTTAGTTATACATTTTTGTGAGGAACAATTTATAATCCTACCAGAAAAATTCATGTACTCCTAGGTGAAGCTTTTGTCTGGTGAGATTAAAAGTAAAATGCATGCTTCATTTGCATCCTTT CGTAAGCCCAAAGAGTCAATTTCGCGTTTGAAGTAAACTCTCCATTTCCCTCTCTCGAGCTTTTCTTCCTCTCTGCGAAAAAATGTCAGAAGCCACAATAACGATCCTGGACGGCACGCAGCTAAGATCCATCGACCTCTCTCTGTCCTTCTCCGATCGTAGTGTCACCGGAGCTCAGGTCCTTGACCTTGCCGATTCCTCCGTCTCCTCGTCTCTGTTCGGGATCGCCTTGTCGGAGACTCTCAGATCATCTGCTCTTAATCGCATTGGCTTCCACGACATTGTTGCTTTCCGACGATCGGAGCTCACTCGTGAACGAGCCTCTGAGATTCTGAAGGACTATGTAGCTGCGATCGCCGATGGTTTACGAGATGATCCTGTTGTAGTGTCAATTTTGGATGGGAACAATCTGCGTGTTTTCTTAGATGATGAAGATGATTTTGCAATGCTAGCCGAGACCCTTTTCACTGATTTAGATACAGAAGATAAAGGAAAGATCAAGAAGAGTGAGGTTAAAAATGCTCTTATCCACATGGGGGTTGAAACGGGTGTACCACCTCTCTCAGAATATCCTTTGCTGAGCGACATCTTGCAAAAACACGAAGTGGAGAGCAGCAATGAATTGGGCCAAGCTCAATTTGCAGAAGTGCTTCAGCCTGTCCTTCAAGAGTTAGCAGATACTCTTGCAAAAAAGCCTTATGTTTTCATTCGAAGTATCAAGGTCGCTAATGGAGCTCAGATAAAAAAGCTTTTGGCTGACGAGAAGCAATTCAGCAATGTCATAGAAAAGCTCTGGCAGTGGCAGGGAACCCATAAAGAAGAGGATGAGGTAACAACTTTGCAAAAAATCAGGAATTACTTCGAAAAAGAATGGAGGGAACTGGGCTTACCACCTACAGAAGCCAATGATGCCATGGTTCTTCTCTATGATGCAATATTTGCTGATATAGCGAAGGAGAAGTGTGGTTCGATATCTGAAAAAAATCAAGTTGAAAAACTTGCGAAGGAGATTTTGGAGATATTTGTGGAGCAGCTTGAAGCCAGTCCTGTGTATTATGATTGTGACCCCAAATGAGCAAGGTGACCATGTTACATCTGAAGCTCGCGTCATCACTTACGGAATCGGTCGTTTCTTCGATCATCATTCTCTTATGATCAGGTACGAGCATTTAAGAGTAAAGTAATTATGATATCAAACTCCTTTGGGCTAGCATGTTATCCTGAAACATAGTCATGTTCATTATATACCATACTGAATTTGGAGCCCCTTGAAGTGGCCAATAGTTTTATACCATGACATACAGAATCAGAATAAAATGTATCATTCAGATGGGATTTAGTTATACATTTTTGTGAGGAACAATTTATAATCCTACCAGAAAAATTCATGTACTCCTAGGTGAAGCTTTTGTCTGGTGAGATTAAAAGTAAAATGCATGCTTCATTTGCATCCTTT ATGTCAGAAGCCACAATAACGATCCTGGACGGCACGCAGCTAAGATCCATCGACCTCTCTCTGTCCTTCTCCGATCGTAGTGTCACCGGAGCTCAGGTCCTTGACCTTGCCGATTCCTCCGTCTCCTCGTCTCTGTTCGGGATCGCCTTGTCGGAGACTCTCAGATCATCTGCTCTTAATCGCATTGGCTTCCACGACATTGTTGCTTTCCGACGATCGGAGCTCACTCGTGAACGAGCCTCTGAGATTCTGAAGGACTATGTAGCTGCGATCGCCGATGGTTTACGAGATGATCCTGTTGTAGTGTCAATTTTGGATGGGAACAATCTGCGTGTTTTCTTAGATGATGAAGATGATTTTGCAATGCTAGCCGAGACCCTTTTCACTGATTTAGATACAGAAGATAAAGGAAAGATCAAGAAGAGTGAGGTTAAAAATGCTCTTATCCACATGGGGGTTGAAACGGGTGTACCACCTCTCTCAGAATATCCTTTGCTGAGCGACATCTTGCAAAAACACGAAGTGGAGAGCAGCAATGAATTGGGCCAAGCTCAATTTGCAGAAGTGCTTCAGCCTGTCCTTCAAGAGTTAGCAGATACTCTTGCAAAAAAGCCTTATGTTTTCATTCGAAGTATCAAGGTCGCTAATGGAGCTCAGATAAAAAAGCTTTTGGCTGACGAGAAGCAATTCAGCAATGTCATAGAAAAGCTCTGGCAGTGGCAGGGAACCCATAAAGAAGAGGATGAGGTAACAACTTTGCAAAAAATCAGGAATTACTTCGAAAAAGAATGGAGGGAACTGGGCTTACCACCTACAGAAGCCAATGATGCCATGGTTCTTCTCTATGATGCAATATTTGCTGATATAGCGAAGGAGAAGTGTGGTTCGATATCTGAAAAAAATCAAGTTGAAAAACTTGCGAAGGAGATTTTGGAGATATTTGTGGAGCAGCTTGAAGCCAGTCCTGTGTATTATGATTGTGACCCCAAATGA MSEATITILDGTQLRSIDLSLSFSDRSVTGAQVLDLADSSVSSSLFGIALSETLRSSALNRIGFHDIVAFRRSELTRERASEILKDYVAAIADGLRDDPVVVSILDGNNLRVFLDDEDDFAMLAETLFTDLDTEDKGKIKKSEVKNALIHMGVETGVPPLSEYPLLSDILQKHEVESSNELGQAQFAEVLQPVLQELADTLAKKPYVFIRSIKVANGAQIKKLLADEKQFSNVIEKLWQWQGTHKEEDEVTTLQKIRNYFEKEWRELGLPPTEANDAMVLLYDAIFADIAKEKCGSISEKNQVEKLAKEILEIFVEQLEASPVYYDCDPK
BLAST of Cp4.1LG11g09710 vs. TrEMBL
Match: A0A0A0LID8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011470 PE=4 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 5.9e-147 Identity = 272/327 (83.18%), Postives = 300/327 (91.74%), Query Frame = 1
BLAST of Cp4.1LG11g09710 vs. TrEMBL
Match: U5GB07_POPTR (Calcium-binding EF hand family protein OS=Populus trichocarpa GN=POPTR_0005s05440g PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 2.0e-94 Identity = 190/331 (57.40%), Postives = 250/331 (75.53%), Query Frame = 1
BLAST of Cp4.1LG11g09710 vs. TrEMBL
Match: A0A061F999_THECC (Calcium-binding EF hand family protein OS=Theobroma cacao GN=TCM_026352 PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 2.6e-94 Identity = 182/331 (54.98%), Postives = 256/331 (77.34%), Query Frame = 1
BLAST of Cp4.1LG11g09710 vs. TrEMBL
Match: A0A0D2SCL9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G120900 PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 5.8e-94 Identity = 179/332 (53.92%), Postives = 257/332 (77.41%), Query Frame = 1
BLAST of Cp4.1LG11g09710 vs. TrEMBL
Match: A0A0B0P2C1_GOSAR (Calcium-binding mitochondrial carrier SCaMC-1 OS=Gossypium arboreum GN=F383_07020 PE=4 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 9.9e-94 Identity = 180/332 (54.22%), Postives = 257/332 (77.41%), Query Frame = 1
BLAST of Cp4.1LG11g09710 vs. TAIR10
Match: AT5G28830.1 (AT5G28830.1 calcium-binding EF hand family protein) HSP 1 Score: 278.1 bits (710), Expect = 7.0e-75 Identity = 152/322 (47.20%), Postives = 220/322 (68.32%), Query Frame = 1
BLAST of Cp4.1LG11g09710 vs. TAIR10
Match: AT4G38810.2 (AT4G38810.2 Calcium-binding EF-hand family protein) HSP 1 Score: 68.2 bits (165), Expect = 1.1e-11 Identity = 57/260 (21.92%), Postives = 127/260 (48.85%), Query Frame = 1
BLAST of Cp4.1LG11g09710 vs. TAIR10
Match: AT2G44310.1 (AT2G44310.1 Calcium-binding EF-hand family protein) HSP 1 Score: 50.1 bits (118), Expect = 3.1e-06 Identity = 29/115 (25.22%), Postives = 52/115 (45.22%), Query Frame = 1
BLAST of Cp4.1LG11g09710 vs. NCBI nr
Match: gi|449442925|ref|XP_004139231.1| (PREDICTED: uncharacterized protein LOC101222315 [Cucumis sativus]) HSP 1 Score: 528.5 bits (1360), Expect = 8.5e-147 Identity = 272/327 (83.18%), Postives = 300/327 (91.74%), Query Frame = 1
BLAST of Cp4.1LG11g09710 vs. NCBI nr
Match: gi|659070623|ref|XP_008455911.1| (PREDICTED: uncharacterized protein LOC103495980 [Cucumis melo]) HSP 1 Score: 516.9 bits (1330), Expect = 2.6e-143 Identity = 270/327 (82.57%), Postives = 298/327 (91.13%), Query Frame = 1
BLAST of Cp4.1LG11g09710 vs. NCBI nr
Match: gi|645222646|ref|XP_008218259.1| (PREDICTED: uncharacterized protein LOC103318633 [Prunus mume]) HSP 1 Score: 362.5 bits (929), Expect = 8.0e-97 Identity = 190/326 (58.28%), Postives = 251/326 (76.99%), Query Frame = 1
BLAST of Cp4.1LG11g09710 vs. NCBI nr
Match: gi|743866260|ref|XP_011032412.1| (PREDICTED: uncharacterized protein LOC105131236 [Populus euphratica]) HSP 1 Score: 360.1 bits (923), Expect = 4.0e-96 Identity = 193/331 (58.31%), Postives = 254/331 (76.74%), Query Frame = 1
BLAST of Cp4.1LG11g09710 vs. NCBI nr
Match: gi|694375862|ref|XP_009364514.1| (PREDICTED: uncharacterized protein LOC103954415 [Pyrus x bretschneideri]) HSP 1 Score: 358.2 bits (918), Expect = 1.5e-95 Identity = 189/326 (57.98%), Postives = 252/326 (77.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|