Cp4.1LG08g12970 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGAAGCCACTAAGTACCAGCCCATCAATGGCGGAAATCTGGTTTCAGACGTCAGGAGTCTCTTCTCCATTCTCAAAACCAAGAGAACTCTGGCGTTTGCATATGGATTCATGTTCGCCTTCGTTGTTTTCACTGCCTTTTTGGCTTTCAACCCTTCTGCTACAACTTCCTTTTCTCCTTCCTTATCCAGTATTTTCAGCGGGAGTAACTCTTTTGGTCCTAATTCCGCTAATGGCGGTTCTGGATCTCGATACCCTTATTTTATTTCTTACTTTCTCCCTAACGGTTCTGTTCAGCAGAGTAATCGACTGATCCCTCCGCCGGTGCCGGAGGGGAATCTATCTATATCTAGTAATGCGACGGTTCAGCCTCGGCCGCAGATTGTCGAGAAAGAGCCGCTGCGTGGGAAGAACCGTACGGAAGAATTGGTGCCGGAAAGTAATCCACCGGCTGGGAATCAGACTCTGGATTCCCGAGTTTCGCCTCCGATTGAAACCACCTCGCCGACGGAAACAGTTAAGAACGACACTCAATCTACGCCGGTTTCTAAAGGTACGGAGTCTAATAGAACTGAATCAGTGCCTGTGAAAGCAGCTCCTCCAGTGGTGGATGATCAGATTCAGGGTTCAGGCATTAAATCGACTCCGTTGGGCAATGACAGTTCTAGGGTGGAGGATAAAAATGTATCATCGAATTACACAGCTCCATTGTCGAAGAAGCAGAAGGGTGAGATGAATTCTGCTTCTGGTGGATCGATGAACAAGAAGGATTGGTTTGAGTCTTTGAAGAATTGTGATTTTTTCGATGGAGAGTGGGTGCCGGATGATTCTTACCCTCTTTACAAACCTGGTTCTTGTCCGCTTATTGATGAACAATTCAATTGTCATCTGAATGGCAGGCCTGATAAGAATTATCAGAAACTTAGATGGAAGCCCAATGGATGCGATCTTCCAAGGTATGAACAATTTTGTTTTTGCAAGTTTTGTTAATGGTTGAGCTTTTTTTGGCCTTTTCTTTTCAGGTTTTGCGTAACTCTTACTGAATTGAATTGTTTAATCTGAAATTTGTTGCCCCTTTACTCTTTGGACCGTTCTTTTTTGATGACATGTTTGGAAAAGACGAGAAAGAAAAAGAAAAGGCAATGTTTGTTCTGAATTTGATGAATTCAAAGCAACCATTTGAGTTTTATGCTTTTGGGTTTTGTTCTTCTGCCTATGCACTCAATGTTGTGTGCTTTTGAGATTTCTAATCTAGTTTAATCAAATTTGAATTGTGTTAAACGATGGTTTGTAGCTCAATGTTAAGTAGTAGCCTATAGTTCTCATAAGAACTTCAAATAATCTGTTTCTTGTTCCATAAGACCTTTATAATTACGCTATGGTGTAGGCTCGATGGAGGTCGAATGTTGGATATGTTAAAAGGGAAGCGACTAGTTTTCGTGGGCGATTCGCTGAATCGAAACATGTGGGAATCGCTTGTTTGTATTTTGAGAAACTCAGTTAAAGATCAAAGTAAGGTGTTTGAAGCTAATGGCAGACAGGTATTCAGAGGGGAAGCAGCCTACTCTTTCATATTTAAGGTTGGTTTTGTGTTCTTCTTGTTCTTTCAAGGATTTGTTTTTGCAAACTATTGCTCAGCTCTGTTTTGGTGATGTTTATTCATTTGGTGGCTGTTTTTCGTCTTTGGTTTGATGATAGGATTATAACTTCACCGTAGAGTTCTTTGTGTCTCCTTTCTTAGTCCGAGAATGGGAGGTGCCAGACAAGAATGGTAAGAAGAAGGAAACGTTGCGTCTCGATTTGGTCGGGAAATCGTCCGTTCAATACGAAGGAGCTGATATAATCATCTTCAACACTGGTCACTGGTGGACTCATGACAAAACTTCAAGAGGGTAAGTGTGAATTGTGTTATGTTTTTTTATGAGTGAAATTCAATGCGTGTATTTGGAAGTTTGACGAGTTCGGTGATGTCGAACGAACGCAGGAAAGATTATTACCAAGAAGGGAGCCATGTTTATGGAGAATTGAATGTTCTTGAGGCGTTTCGAAAGGCGGTAACGACATGGGCGAGATGGGTTGATAAGAACATAAATCCAATGAAGTCCATTGTTTTCTTTAGGGGCTACTCTGCATCCCATTTCAGGTACAAAGAACATAGAACTGAATGAGAATTTTAGTTTGCACACTGAAACAATCAATCAACCTTGGGTCATATGAATCCATCTTGTGCTTCACAGTGGAGGGCAATGGAACTCGGGTGGGCAATGCGACAGCGAGATCGAGCCAATCAAGAACAAGACGTTTCTGAGACCGTACCTGCCGAAGATGATGATACTGGAGAAGGTATTGAAAGGGATGAAAACTCACGTAACATATCTGAACATCACAATGATGTCAGATTTTCGGAAGGACGGGCACCCGTCGATCTATCGAAAGCAAAGGCTAACAGAAGAAGAGAAGAAAACACCTTTGAAATTCCAGGACTGCAGCCATTGGTGTCTTCCGGGTGTTCCTGACGCATGGAATGAGATGTTATATGCAGAACTGCTACTGAGACAGCATCAGCAAGAGAGAACATAGAGAGCTACAAAGAAAGAAACAAATAAACAAAAAAAGAAGGTACATATTTTATTGGGTTTTGAGTTCATATCATCAAGTTTTAGAAGATTTGTGTTTTTTCTTTTTCTTTTCTGGAAATCGTATAGAAAAGATCGATCAAACAGCAAGAGTTAGGCCCAAAGAATTGATATGGGTTCATTTTTTCTTCATTCTACAATAATTTATGAGAGAGTAGGGCATAGATAGGAGGCTAGTTTGTGTTTCTTGAGGATGATCTGCTTCTGTTCATAAGGGAATGCTTTAATGCAAATATTTATGTTATATTTTCAATATATATATATATATAGTCCCTATGAGTCTACATGTAACCGTCTAAGTTCACTGTTAGCAGATATTGTTCGTTTTAGTTTATTATATATCACTATCAGCCTCATGGGTATAAAAGGTGTCACCGAGAGGTTTCATACCCTTAGATAGTGCAAGGTTTCACACCCTTAACATATATAGTCCCTATGAGTCTACATGTAACAGTCCAAGCTCACTGTTAATAGATATTGTTCATTTTAGCTTAT ATGGCTGAAGCCACTAAGTACCAGCCCATCAATGGCGGAAATCTGGTTTCAGACGTCAGGAGTCTCTTCTCCATTCTCAAAACCAAGAGAACTCTGGCGTTTGCATATGGATTCATGTTCGCCTTCGTTGTTTTCACTGCCTTTTTGGCTTTCAACCCTTCTGCTACAACTTCCTTTTCTCCTTCCTTATCCAGTATTTTCAGCGGGAGTAACTCTTTTGGTCCTAATTCCGCTAATGGCGGTTCTGGATCTCGATACCCTTATTTTATTTCTTACTTTCTCCCTAACGGTTCTGTTCAGCAGAGTAATCGACTGATCCCTCCGCCGGTGCCGGAGGGGAATCTATCTATATCTAGTAATGCGACGGTTCAGCCTCGGCCGCAGATTGTCGAGAAAGAGCCGCTGCGTGGGAAGAACCGTACGGAAGAATTGGTGCCGGAAAGTAATCCACCGGCTGGGAATCAGACTCTGGATTCCCGAGTTTCGCCTCCGATTGAAACCACCTCGCCGACGGAAACAGTTAAGAACGACACTCAATCTACGCCGGTTTCTAAAGGTACGGAGTCTAATAGAACTGAATCAGTGCCTGTGAAAGCAGCTCCTCCAGTGGTGGATGATCAGATTCAGGGTTCAGGCATTAAATCGACTCCGTTGGGCAATGACAGTTCTAGGGTGGAGGATAAAAATGATTATAACTTCACCGTAGAGTTCTTTGTGTCTCCTTTCTTAGTCCGAGAATGGGAGGTGCCAGACAAGAATGGTAAGAAGAAGGAAACGTTGCGTCTCGATTTGGTCGGGAAATCGTCCGTTCAATACGAAGGAGCTGATATAATCATCTTCAACACTGGTCACTGGTGGACTCATGACAAAACTTCAAGAGGGAAAGATTATTACCAAGAAGGGAGCCATGTTTATGGAGAATTGAATGTTCTTGAGGCGTTTCGAAAGGCGGTAACGACATGGGCGAGATGGGTTGATAAGAACATAAATCCAATGAAGTCCATTGTTTTCTTTAGGGGCTACTCTGCATCCCATTTCAGTGGAGGGCAATGGAACTCGGGTGGGCAATGCGACAGCGAGATCGAGCCAATCAAGAACAAGACGTTTCTGAGACCGTACCTGCCGAAGATGATGATACTGGAGAAGGTATTGAAAGGGATGAAAACTCACGTAACATATCTGAACATCACAATGATGTCAGATTTTCGGAAGGACGGGCACCCGTCGATCTATCGAAAGCAAAGGCTAACAGAAGAAGAGAAGAAAACACCTTTGAAATTCCAGGACTGCAGCCATTGGTGTCTTCCGGGTGTTCCTGACGCATGGAATGAGATGTTATATGCAGAACTGCTACTGAGACAGCATCAGCAAGAGAGAACATAGAGAGCTACAAAGAAAGAAACAAATAAACAAAAAAAGAAGGTACATATTTTATTGGGTTTTGAGTTCATATCATCAAGTTTTAGAAGATTTGTGTTTTTTCTTTTTCTTTTCTGGAAATCGTATAGAAAAGATCGATCAAACAGCAAGAGTTAGGCCCAAAGAATTGATATGGGTTCATTTTTTCTTCATTCTACAATAATTTATGAGAGAGTAGGGCATAGATAGGAGGCTAGTTTGTGTTTCTTGAGGATGATCTGCTTCTGTTCATAAGGGAATGCTTTAATGCAAATATTTATGTTATATTTTCAATATATATATATATATAGTCCCTATGAGTCTACATGTAACCGTCTAAGTTCACTGTTAGCAGATATTGTTCGTTTTAGTTTATTATATATCACTATCAGCCTCATGGGTATAAAAGGTGTCACCGAGAGGTTTCATACCCTTAGATAGTGCAAGGTTTCACACCCTTAACATATATAGTCCCTATGAGTCTACATGTAACAGTCCAAGCTCACTGTTAATAGATATTGTTCATTTTAGCTTAT ATGGCTGAAGCCACTAAGTACCAGCCCATCAATGGCGGAAATCTGGTTTCAGACGTCAGGAGTCTCTTCTCCATTCTCAAAACCAAGAGAACTCTGGCGTTTGCATATGGATTCATGTTCGCCTTCGTTGTTTTCACTGCCTTTTTGGCTTTCAACCCTTCTGCTACAACTTCCTTTTCTCCTTCCTTATCCAGTATTTTCAGCGGGAGTAACTCTTTTGGTCCTAATTCCGCTAATGGCGGTTCTGGATCTCGATACCCTTATTTTATTTCTTACTTTCTCCCTAACGGTTCTGTTCAGCAGAGTAATCGACTGATCCCTCCGCCGGTGCCGGAGGGGAATCTATCTATATCTAGTAATGCGACGGTTCAGCCTCGGCCGCAGATTGTCGAGAAAGAGCCGCTGCGTGGGAAGAACCGTACGGAAGAATTGGTGCCGGAAAGTAATCCACCGGCTGGGAATCAGACTCTGGATTCCCGAGTTTCGCCTCCGATTGAAACCACCTCGCCGACGGAAACAGTTAAGAACGACACTCAATCTACGCCGGTTTCTAAAGGTACGGAGTCTAATAGAACTGAATCAGTGCCTGTGAAAGCAGCTCCTCCAGTGGTGGATGATCAGATTCAGGGTTCAGGCATTAAATCGACTCCGTTGGGCAATGACAGTTCTAGGGTGGAGGATAAAAATGATTATAACTTCACCGTAGAGTTCTTTGTGTCTCCTTTCTTAGTCCGAGAATGGGAGGTGCCAGACAAGAATGGTAAGAAGAAGGAAACGTTGCGTCTCGATTTGGTCGGGAAATCGTCCGTTCAATACGAAGGAGCTGATATAATCATCTTCAACACTGGTCACTGGTGGACTCATGACAAAACTTCAAGAGGGAAAGATTATTACCAAGAAGGGAGCCATGTTTATGGAGAATTGAATGTTCTTGAGGCGTTTCGAAAGGCGGTAACGACATGGGCGAGATGGGTTGATAAGAACATAAATCCAATGAAGTCCATTGTTTTCTTTAGGGGCTACTCTGCATCCCATTTCAGTGGAGGGCAATGGAACTCGGGTGGGCAATGCGACAGCGAGATCGAGCCAATCAAGAACAAGACGTTTCTGAGACCGTACCTGCCGAAGATGATGATACTGGAGAAGGTATTGAAAGGGATGAAAACTCACGTAACATATCTGAACATCACAATGATGTCAGATTTTCGGAAGGACGGGCACCCGTCGATCTATCGAAAGCAAAGGCTAACAGAAGAAGAGAAGAAAACACCTTTGAAATTCCAGGACTGCAGCCATTGGTGTCTTCCGGGTGTTCCTGACGCATGGAATGAGATGTTATATGCAGAACTGCTACTGAGACAGCATCAGCAAGAGAGAACATAG MAEATKYQPINGGNLVSDVRSLFSILKTKRTLAFAYGFMFAFVVFTAFLAFNPSATTSFSPSLSSIFSGSNSFGPNSANGGSGSRYPYFISYFLPNGSVQQSNRLIPPPVPEGNLSISSNATVQPRPQIVEKEPLRGKNRTEELVPESNPPAGNQTLDSRVSPPIETTSPTETVKNDTQSTPVSKGTESNRTESVPVKAAPPVVDDQIQGSGIKSTPLGNDSSRVEDKNDYNFTVEFFVSPFLVREWEVPDKNGKKKETLRLDLVGKSSVQYEGADIIIFNTGHWWTHDKTSRGKDYYQEGSHVYGELNVLEAFRKAVTTWARWVDKNINPMKSIVFFRGYSASHFSGGQWNSGGQCDSEIEPIKNKTFLRPYLPKMMILEKVLKGMKTHVTYLNITMMSDFRKDGHPSIYRKQRLTEEEKKTPLKFQDCSHWCLPGVPDAWNEMLYAELLLRQHQQERT
BLAST of Cp4.1LG08g12970 vs. Swiss-Prot
Match: TBR_ARATH (Protein trichome birefringence OS=Arabidopsis thaliana GN=TBR PE=1 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 6.8e-110 Identity = 177/231 (76.62%), Postives = 208/231 (90.04%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. Swiss-Prot
Match: TBL1_ARATH (Protein trichome birefringence-like 1 OS=Arabidopsis thaliana GN=TBL1 PE=2 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 2.9e-105 Identity = 170/227 (74.89%), Postives = 201/227 (88.55%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. Swiss-Prot
Match: TBL2_ARATH (Protein trichome birefringence-like 2 OS=Arabidopsis thaliana GN=TBL2 PE=2 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 1.7e-76 Identity = 131/223 (58.74%), Postives = 163/223 (73.09%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. Swiss-Prot
Match: TBL4_ARATH (Protein trichome birefringence-like 4 OS=Arabidopsis thaliana GN=TBL4 PE=3 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 6.6e-73 Identity = 126/225 (56.00%), Postives = 160/225 (71.11%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. Swiss-Prot
Match: TBL5_ARATH (Protein trichome birefringence-like 5 OS=Arabidopsis thaliana GN=TBL5 PE=2 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 7.3e-72 Identity = 115/226 (50.88%), Postives = 163/226 (72.12%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. TrEMBL
Match: A0A0A0LBT4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G800710 PE=4 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 3.2e-122 Identity = 201/231 (87.01%), Postives = 222/231 (96.10%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. TrEMBL
Match: A0A103YMZ2_CYNCS (PC-Esterase OS=Cynara cardunculus var. scolymus GN=Ccrd_009547 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 3.5e-121 Identity = 251/484 (51.86%), Postives = 317/484 (65.50%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. TrEMBL
Match: B9IIA3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s05930g PE=4 SV=2) HSP 1 Score: 421.8 bits (1083), Expect = 1.1e-114 Identity = 185/231 (80.09%), Postives = 214/231 (92.64%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. TrEMBL
Match: A0A059DJ21_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02463 PE=4 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 2.4e-114 Identity = 186/228 (81.58%), Postives = 211/228 (92.54%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. TrEMBL
Match: K7LD54_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G109600 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 1.6e-113 Identity = 190/235 (80.85%), Postives = 213/235 (90.64%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. TAIR10
Match: AT5G06700.1 (AT5G06700.1 Plant protein of unknown function (DUF828)) HSP 1 Score: 399.1 bits (1024), Expect = 3.8e-111 Identity = 177/231 (76.62%), Postives = 208/231 (90.04%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. TAIR10
Match: AT3G12060.1 (AT3G12060.1 Plant protein of unknown function (DUF828)) HSP 1 Score: 383.6 bits (984), Expect = 1.7e-106 Identity = 170/227 (74.89%), Postives = 201/227 (88.55%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. TAIR10
Match: AT1G60790.1 (AT1G60790.1 Plant protein of unknown function (DUF828)) HSP 1 Score: 288.1 bits (736), Expect = 9.5e-78 Identity = 131/223 (58.74%), Postives = 163/223 (73.09%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. TAIR10
Match: AT5G49340.1 (AT5G49340.1 TRICHOME BIREFRINGENCE-LIKE 4) HSP 1 Score: 276.2 bits (705), Expect = 3.7e-74 Identity = 126/225 (56.00%), Postives = 160/225 (71.11%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. TAIR10
Match: AT5G20590.1 (AT5G20590.1 TRICHOME BIREFRINGENCE-LIKE 5) HSP 1 Score: 272.7 bits (696), Expect = 4.1e-73 Identity = 115/226 (50.88%), Postives = 163/226 (72.12%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. NCBI nr
Match: gi|659084714|ref|XP_008443032.1| (PREDICTED: protein trichome birefringence [Cucumis melo]) HSP 1 Score: 450.3 bits (1157), Expect = 4.1e-123 Identity = 204/231 (88.31%), Postives = 223/231 (96.54%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. NCBI nr
Match: gi|449437563|ref|XP_004136561.1| (PREDICTED: protein trichome birefringence [Cucumis sativus]) HSP 1 Score: 446.8 bits (1148), Expect = 4.5e-122 Identity = 201/231 (87.01%), Postives = 222/231 (96.10%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. NCBI nr
Match: gi|976929178|gb|KVI12038.1| (PC-Esterase [Cynara cardunculus var. scolymus]) HSP 1 Score: 443.4 bits (1139), Expect = 5.0e-121 Identity = 251/484 (51.86%), Postives = 317/484 (65.50%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. NCBI nr
Match: gi|1009161453|ref|XP_015898906.1| (PREDICTED: protein trichome birefringence [Ziziphus jujuba]) HSP 1 Score: 427.9 bits (1099), Expect = 2.2e-116 Identity = 188/234 (80.34%), Postives = 217/234 (92.74%), Query Frame = 1
BLAST of Cp4.1LG08g12970 vs. NCBI nr
Match: gi|566208936|ref|XP_002323329.2| (hypothetical protein POPTR_0016s05930g [Populus trichocarpa]) HSP 1 Score: 421.8 bits (1083), Expect = 1.6e-114 Identity = 185/231 (80.09%), Postives = 214/231 (92.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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