Cp4.1LG08g00600 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGTACGACGGTATTATAGCCATTTTGAATCGGATACTCTTCTAATCTCTTTTTCTTTTTAATGTCATTTTCTTCTTTTTTATTTTTATTTTATTTTTTTGTTCATAACCCTCTTCCTCTCTGCCTATAAGTAACCCTAAAACACACATCTCTGAGCTTAACTTTCCCATATCTCCTTTTCTATTATCTTCCCTCACCAAACAAACACTTTTTATTTTCACGATGGCGGGTCGTCTTCGTCGCTCGATGTTTCGTCTTTCTTCCTTTAAGCGACCTTTTATCCATGGTGGCAGTAATTCAAGACAAGATTCAGGTCGATATCCTTCAACCAGCAAAGAGTCGTCGATGGAACCACGGGCTCGCTCACCGTCGGTTTCGCCCAAGAGAGAGTCCGTTGCTGCTTCTCCGACGTACTCTGTGAAGAAGGTTGCTTCACCGTCTCCTTCTCCATCGTATGGAGGTTCAAGTGGAGGAGTGATGAGCTCACAACCGAAGGCTGTAGATGAATACGTTAAGGATAAACCAACTACTCAACCCAGGTTGATTACACTAAACTCAAACACTTCTTCATGTTAGTCATCATCTATATGCTAAGGACCATTCATTGCACGTCAATCGTGGTTTATATTAAAAACAAAATTTGCATGTCGATCTGATTACCATCTATGCTAATAGGTTATGATTTATGACATATTAGTTTAGTTATGTTGATGAGATCCCACTCGATGAGAAGAACAAAACATTTTTTATAAGAGTGGAAATCTCTGCTTAGGGTTTTAGAAACCTTGAGGCAAAATCTGAAAAAGAAAGCCTATAAGAGGACAATATCTACTAGCGATGTGTTTGGGCCGTTACAAATGATATTAGAGCTAGACACCGAGCGATGTGCTGCTGAGCTTCGAAGGGAGTGGACACGAGGCGGTGTGCTAGGACGCTGGACACAAAGTGGTGTGCCACAAAGACACTGGCCCCAAGGGGTGGACATGAAGTGGTGTGCCAGCAAGGACGTTGGACCCCAAAAGGGGTGGACACAAAGTGGTGTGCCAGCAAAGACGCTGGCCCCAAGGGGTGGACACGAAGTGGTGTGCCAGCAAGAACGTTGGACCCCGAAAGGGGTGGACACAAAGTGGTGTGCCAGCAAAGACGCTGGCCCCAAGGGGTGGACACAAAGCGGTGTGTCAGCAAAGACGCTGGGCCTCGAAGGGGGTAGCCATAAAACGGTGTGCCAGCAAGGATGCTAGGCCCCGAATGGGATGGATTTGGTGGGTCCCACATCGATGGGTGAAAGAAACAGTGCTAGCGAGGACGTTGGGCCTTGAAGGGGATGAATTGTGAGATACCAGTTGGGGTGGAGAATAAAGACGTTAGGCCCTGAAGGGGGTGGATTGTGAGATCCCAGTTGGAGTGGAGAACGAAACACTCTTTATAAATGTGTGAAAAAGTGGAAACCTTTCTCTAACATATGCGTTTTAAAAACCTTATGACATATGCGTTTTAAAAACCTTATGGACAAATCTGATAGGGAAAACTCGAAGAATACGGGCTAGCTGATATATTACAAACTATGATATATTTAGTCATTTACTCATATTCTTAACACAGATCACCTGAAACCGAGCCTAAAGCGGTGGTCGGAAAAGCCATGAAGAAAGTGACTGATTCGGATCGTCACGTCGAGTCGAGCAAAAGGACGATGACATCCCACAAGCATGAGCCAAATACAATAAAGATTGCAGGAGAAAATCATGGGGCAGTAATGGAAATCTTCGAGTTAAAAGGGGAAGAGAGAGATATGATAGAGAAGAAAGAGAGATTTAGAAGAACATTAAGCAGCAAGGCCAATGATCAAAACAAGGAAGGCTCTAAGGACCACAGGGGCGAAAGCACTTATTTGAACAGCAATGTTCAGGGCGTAAACAATTCTATTCTTTACGGTGCTTCTTTGGCTCACCATGACCCGGGTTTGCACCACGCTCTCTCCTTAAAACCACGAGTAACCTCATGATTGGGGTCGGGAAATGTAATCACATGATTAAGTATATTTAGTATTAAATTATAGTTTACCAGCAAATATCTAGATATTTGTCTTCTTGCCGTGTTATTTTCATTTATTACTATTTTCATATCCTTGTAATTTATTTAATTATAAATAAAGAACTTTCACACACATTTAGGTGCGGTGGATTAAGCAAACATTCTCAACATGCAATCATAGTGAAACCTATCTTTTCATAAAACATCATATTAGTTTAGATGTGTAATATTTCTCTACCCACAGCATACGCACGCACACATGGACCCTATAAGGTGAGCATATACGTGGTCTAAGTCTGCCCTTCAATTAGTCATGCTCATGTAGCCGGAACCATTGAGGGAAAAGAGCCTACATAA TTGTACGACGGTATTATAGCCATTTTGAATCGGATACTCTTCTAATCTCTTTTTCTTTTTAATGTCATTTTCTTCTTTTTTATTTTTATTTTATTTTTTTGTTCATAACCCTCTTCCTCTCTGCCTATAAGTAACCCTAAAACACACATCTCTGAGCTTAACTTTCCCATATCTCCTTTTCTATTATCTTCCCTCACCAAACAAACACTTTTTATTTTCACGATGGCGGGTCGTCTTCGTCGCTCGATGTTTCGTCTTTCTTCCTTTAAGCGACCTTTTATCCATGGTGGCAGTAATTCAAGACAAGATTCAGGTCGATATCCTTCAACCAGCAAAGAGTCGTCGATGGAACCACGGGCTCGCTCACCGTCGGTTTCGCCCAAGAGAGAGTCCGTTGCTGCTTCTCCGACGTACTCTGTGAAGAAGGTTGCTTCACCGTCTCCTTCTCCATCGTATGGAGGTTCAAGTGGAGGAGTGATGAGCTCACAACCGAAGGCTGTAGATGAATACGTTAAGGATAAACCAACTACTCAACCCAGATCACCTGAAACCGAGCCTAAAGCGGTGGTCGGAAAAGCCATGAAGAAAGTGACTGATTCGGATCGTCACGTCGAGTCGAGCAAAAGGACGATGACATCCCACAAGCATGAGCCAAATACAATAAAGATTGCAGGAGAAAATCATGGGGCAGTAATGGAAATCTTCGAGTTAAAAGGGGAAGAGAGAGATATGATAGAGAAGAAAGAGAGATTTAGAAGAACATTAAGCAGCAAGGCCAATGATCAAAACAAGGAAGGCTCTAAGGACCACAGGGGCGAAAGCACTTATTTGAACAGCAATGTTCAGGGCGTAAACAATTCTATTCTTTACGGTGCTTCTTTGGCTCACCATGACCCGGCCGGAACCATTGAGGGAAAAGAGCCTACATAA ATGGCGGGTCGTCTTCGTCGCTCGATGTTTCGTCTTTCTTCCTTTAAGCGACCTTTTATCCATGGTGGCAGTAATTCAAGACAAGATTCAGGTCGATATCCTTCAACCAGCAAAGAGTCGTCGATGGAACCACGGGCTCGCTCACCGTCGGTTTCGCCCAAGAGAGAGTCCGTTGCTGCTTCTCCGACGTACTCTGTGAAGAAGGTTGCTTCACCGTCTCCTTCTCCATCGTATGGAGGTTCAAGTGGAGGAGTGATGAGCTCACAACCGAAGGCTGTAGATGAATACGTTAAGGATAAACCAACTACTCAACCCAGATCACCTGAAACCGAGCCTAAAGCGGTGGTCGGAAAAGCCATGAAGAAAGTGACTGATTCGGATCGTCACGTCGAGTCGAGCAAAAGGACGATGACATCCCACAAGCATGAGCCAAATACAATAAAGATTGCAGGAGAAAATCATGGGGCAGTAATGGAAATCTTCGAGTTAAAAGGGGAAGAGAGAGATATGATAGAGAAGAAAGAGAGATTTAGAAGAACATTAAGCAGCAAGGCCAATGATCAAAACAAGGAAGGCTCTAAGGACCACAGGGGCGAAAGCACTTATTTGAACAGCAATGTTCAGGGCGTAAACAATTCTATTCTTTACGGTGCTTCTTTGGCTCACCATGACCCGGCCGGAACCATTGAGGGAAAAGAGCCTACATAA MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGRYPSTSKESSMEPRARSPSVSPKRESVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEYVKDKPTTQPRSPETEPKAVVGKAMKKVTDSDRHVESSKRTMTSHKHEPNTIKIAGENHGAVMEIFELKGEERDMIEKKERFRRTLSSKANDQNKEGSKDHRGESTYLNSNVQGVNNSILYGASLAHHDPAGTIEGKEPT
BLAST of Cp4.1LG08g00600 vs. TrEMBL
Match: A0A0A0L3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119280 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.3e-34 Identity = 118/243 (48.56%), Postives = 150/243 (61.73%), Query Frame = 1
BLAST of Cp4.1LG08g00600 vs. NCBI nr
Match: gi|659074886|ref|XP_008437848.1| (PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis melo]) HSP 1 Score: 154.8 bits (390), Expect = 1.8e-34 Identity = 113/241 (46.89%), Postives = 145/241 (60.17%), Query Frame = 1
BLAST of Cp4.1LG08g00600 vs. NCBI nr
Match: gi|449432014|ref|XP_004133795.1| (PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus]) HSP 1 Score: 154.8 bits (390), Expect = 1.8e-34 Identity = 118/243 (48.56%), Postives = 150/243 (61.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |