Cp4.1LG06g00840 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGACGAGAGGGAGCAGATCGGAGAAGGTGAACAGGATATTTCAGAAATTTGACGCTAACCATGATGGGGGTCTCAATAGGGACGAAATGGCTGCGCTTGTCGTGGCTGTTAACCCTAGGGTCAAATTCAGCGATGAACAGATCAATGCGATTCTTGACGAGGTGTTTCGGACGTACGGGAATTTTATTCAGGGCGATGAGGGTCTAACTTTTGAGGGGTTGTTGAGGACTTATGATGATGGCGCTGGAGATGTGGACCGTGACTTCGACGCGCTTGAATTGGATATTAATAATAAGGGAATTCTGGTGACTTCAGAGGCTTCCTCTTCTTCAATTGCCGACGAGCGTGCTTTGGAGTCCCAGAAGAAGCAGAGAACTGCAGCGTGGGCATTGTCGCCGAATCATGGCATTGTGTTTGATGATAGTTGGAAGATCGTCGATGATTTGGAGATTTTAATCAAAAGATTGAAGGCCAAGCAGGCTAAGGATGGGAAATTGAAGGCGGACAATTTGGATGCCCACTCTGATGCAGGCTGGTCCAGAGAATTAGGGCCGTCTTCGGAGCTTTCAGAGAAGAGGGTTTTCTGGGAAGAGTCCGGCCATGACTATGCTTCCTTTCTCAAGGAATTAGAGGCGTTGAGAACTCGAGCAGATCGAGCGCGATCCAGAGATGAGGCTTTTGATGGGCATATGGTAATTGGTAGGGTTTTGTATGAGCACCAGCTGTTTAAGGAGGCTCTGGTTAGCTTCAACCGGGCTTGTGAACTGCTACCTACCGACGTGAAGCCGCATTTTAGAGCTGGGAATTGCTTCTATGTTCTTGGAAAGTATAAGGAGGCCAAGGAAGAGTTTCTGTTGGCAGTGGAAGCGGCGGAGGCCGGCGGAAATCAGTGGGGATATTTGCTTCCACAGATTTATGTGAACCTTGGAATTGCACTTGAAGGTGAAGGTATGGTGTTAAGTGCTTGTGAATACTATAGAGAAGCTGCAATTCTGTGTCCCACACATTTTAGAGCGTTGAAGCTTTTGGGGAGTGCTTTATTTGGGGTAGGAGAATATAGGGCCGCCGTAAAGGCCTTGGAAGAGGCCATATTCATGAAGTCGGATTATGCTGATGCGCACTGTGATTTGGCTTCGGCTTTGCATGCAATGGGAGAAGATGAGAGAGCGATTGAGGTGTTTCAGAAGGCAATCGACTTGAAACCTGATCATGTAGATGCTTTGTATAATTTGGGTGGGCTTTACATGGACTTGGGTAGGTTCCAGAGAGCTTCAGAAATGTATACAAGAGTTTTAGCTGTGTGGCCTAACCATTGGCGGGCGCAGCTCAACAAAGCTGTGTCCTTGTTGGGTGCTGGTGAAACAGAGGACGGTAAGAAGGCCTTAAAGGAAGCCTTGAAAATGACAAACAGGGTGGAGTTACATGATGCAATATTGCATTTGAAGCAGCTGCAGAAAAAGAAGTTGAAAGCTAATGGCAGTGCAAATGGAGAGGGGTCTTTTGTAGTCGTGGAAGCCTCAAAGTTTATGACGATTGGAGAGAAGACTGTTTCGAGGCCGGAGTTGTCGAACGCTCTTGTAATTAGGAATTTTCAGAAGATTACCAGAATGAATCGTTGTGATGTGGAGCTTATAAACAAGGAAATCAGTGAACATGACGTGCCAGTGTCGTATTCAGGTAGTGGTGTGCCTGAGAAGTCTATACGCAAGCCTAAGTTAGAAGAAATTCTTCGTAGATTATTGACTTTCTTGAAGCCAGAGACGTTCCAAGGAGCTGTCAAAGGCGTAAACGAGAGGATACTCTCTGTGTTGGATGAGTCAGGCTCAGGAAGGGTGGACTTGGGGCTGTTTTTTGCCGTTCTTGCTCCCATTTGCAATGGCCCCCCTGAAACGAGAAAGCGGGTGGCATACGACGCCCTTGTATGGCGACACGTAAACGAGGGCGGTACTCAGATTAGAAAACTTGATGCAGTTAAGTATATCAAATTGTTGAGGGCTATATATGTTCCTATAGAAGGATCGAGCGAAATTGTGGAAGTCCATGGCCACACCGACAATTCTATCGTGTCTTTCACAGAGTTTCTCGTCATGTTTGATGACCCAGACCGGGGTTTTGGTATCATGTCCACCATGCTAAAGCTAGAAACAGGGGACAGAAATCGTCATGGAAATCACGTATGCTCGGTTTGCCGCTATCCTATCATTGGTTCTCGATTCAAGGAGATGAAATCACATTTTAGCTTGTGTAATCAGTGCTATAGCGAGGGGAAGGTGCCCCCTTCATGCAAGCAAGAAGCATACAGATTTAAAGAGTATGGGAGTGAGGGTGAAGCAGTTAAAGACAAATGTTTCTGCTTTGCAATGCAATCTCATGACGATTCTTAG ATGTCGACGAGAGGGAGCAGATCGGAGAAGGTGAACAGGATATTTCAGAAATTTGACGCTAACCATGATGGGGGTCTCAATAGGGACGAAATGGCTGCGCTTGTCGTGGCTGTTAACCCTAGGGTCAAATTCAGCGATGAACAGATCAATGCGATTCTTGACGAGGTGTTTCGGACGTACGGGAATTTTATTCAGGGCGATGAGGGTCTAACTTTTGAGGGGTTGTTGAGGACTTATGATGATGGCGCTGGAGATGTGGACCGTGACTTCGACGCGCTTGAATTGGATATTAATAATAAGGGAATTCTGGTGACTTCAGAGGCTTCCTCTTCTTCAATTGCCGACGAGCGTGCTTTGGAGTCCCAGAAGAAGCAGAGAACTGCAGCGTGGGCATTGTCGCCGAATCATGGCATTGTGTTTGATGATAGTTGGAAGATCGTCGATGATTTGGAGATTTTAATCAAAAGATTGAAGGCCAAGCAGGCTAAGGATGGGAAATTGAAGGCGGACAATTTGGATGCCCACTCTGATGCAGGCTGGTCCAGAGAATTAGGGCCGTCTTCGGAGCTTTCAGAGAAGAGGGTTTTCTGGGAAGAGTCCGGCCATGACTATGCTTCCTTTCTCAAGGAATTAGAGGCGTTGAGAACTCGAGCAGATCGAGCGCGATCCAGAGATGAGGCTTTTGATGGGCATATGGTAATTGGTAGGGTTTTGTATGAGCACCAGCTGTTTAAGGAGGCTCTGGTTAGCTTCAACCGGGCTTGTGAACTGCTACCTACCGACGTGAAGCCGCATTTTAGAGCTGGGAATTGCTTCTATGTTCTTGGAAAGTATAAGGAGGCCAAGGAAGAGTTTCTGTTGGCAGTGGAAGCGGCGGAGGCCGGCGGAAATCAGTGGGGATATTTGCTTCCACAGATTTATGTGAACCTTGGAATTGCACTTGAAGGTGAAGGCTCAGGAAGGGTGGACTTGGGGCTGTTTTTTGCCGTTCTTGCTCCCATTTGCAATGGCCCCCCTGAAACGAGAAAGCGGGTGGCATACGACGCCCTTGTATGGCGACACGTAAACGAGGGCGGTACTCAGATTAGAAAACTTGATGCAGTTAAGTATATCAAATTGTTGAGGGCTATATATGTTCCTATAGAAGGATCGAGCGAAATTGTGGAAGTCCATGGCCACACCGACAATTCTATCGTGTCTTTCACAGAGTTTCTCGTCATGTTTGATGACCCAGACCGGGGTTTTGGTATCATGTCCACCATGCTAAAGCTAGAAACAGGGGACAGAAATCGTCATGGAAATCACGTATGCTCGGTTTGCCGCTATCCTATCATTGGTTCTCGATTCAAGGAGATGAAATCACATTTTAGCTTGTGTAATCAGTGCTATAGCGAGGGGAAGGTGCCCCCTTCATGCAAGCAAGAAGCATACAGATTTAAAGAGTATGGGAGTGAGGGTGAAGCAGTTAAAGACAAATGTTTCTGCTTTGCAATGCAATCTCATGACGATTCTTAG ATGTCGACGAGAGGGAGCAGATCGGAGAAGGTGAACAGGATATTTCAGAAATTTGACGCTAACCATGATGGGGGTCTCAATAGGGACGAAATGGCTGCGCTTGTCGTGGCTGTTAACCCTAGGGTCAAATTCAGCGATGAACAGATCAATGCGATTCTTGACGAGGTGTTTCGGACGTACGGGAATTTTATTCAGGGCGATGAGGGTCTAACTTTTGAGGGGTTGTTGAGGACTTATGATGATGGCGCTGGAGATGTGGACCGTGACTTCGACGCGCTTGAATTGGATATTAATAATAAGGGAATTCTGGTGACTTCAGAGGCTTCCTCTTCTTCAATTGCCGACGAGCGTGCTTTGGAGTCCCAGAAGAAGCAGAGAACTGCAGCGTGGGCATTGTCGCCGAATCATGGCATTGTGTTTGATGATAGTTGGAAGATCGTCGATGATTTGGAGATTTTAATCAAAAGATTGAAGGCCAAGCAGGCTAAGGATGGGAAATTGAAGGCGGACAATTTGGATGCCCACTCTGATGCAGGCTGGTCCAGAGAATTAGGGCCGTCTTCGGAGCTTTCAGAGAAGAGGGTTTTCTGGGAAGAGTCCGGCCATGACTATGCTTCCTTTCTCAAGGAATTAGAGGCGTTGAGAACTCGAGCAGATCGAGCGCGATCCAGAGATGAGGCTTTTGATGGGCATATGGTAATTGGTAGGGTTTTGTATGAGCACCAGCTGTTTAAGGAGGCTCTGGTTAGCTTCAACCGGGCTTGTGAACTGCTACCTACCGACGTGAAGCCGCATTTTAGAGCTGGGAATTGCTTCTATGTTCTTGGAAAGTATAAGGAGGCCAAGGAAGAGTTTCTGTTGGCAGTGGAAGCGGCGGAGGCCGGCGGAAATCAGTGGGGATATTTGCTTCCACAGATTTATGTGAACCTTGGAATTGCACTTGAAGGTGAAGGCTCAGGAAGGGTGGACTTGGGGCTGTTTTTTGCCGTTCTTGCTCCCATTTGCAATGGCCCCCCTGAAACGAGAAAGCGGGTGGCATACGACGCCCTTGTATGGCGACACGTAAACGAGGGCGGTACTCAGATTAGAAAACTTGATGCAGTTAAGTATATCAAATTGTTGAGGGCTATATATGTTCCTATAGAAGGATCGAGCGAAATTGTGGAAGTCCATGGCCACACCGACAATTCTATCGTGTCTTTCACAGAGTTTCTCGTCATGTTTGATGACCCAGACCGGGGTTTTGGTATCATGTCCACCATGCTAAAGCTAGAAACAGGGGACAGAAATCGTCATGGAAATCACGTATGCTCGGTTTGCCGCTATCCTATCATTGGTTCTCGATTCAAGGAGATGAAATCACATTTTAGCTTGTGTAATCAGTGCTATAGCGAGGGGAAGGTGCCCCCTTCATGCAAGCAAGAAGCATACAGATTTAAAGAGTATGGGAGTGAGGGTGAAGCAGTTAAAGACAAATGTTTCTGCTTTGCAATGCAATCTCATGACGATTCTTAG MSTRGSRSEKVNRIFQKFDANHDGGLNRDEMAALVVAVNPRVKFSDEQINAILDEVFRTYGNFIQGDEGLTFEGLLRTYDDGAGDVDRDFDALELDINNKGILVTSEASSSSIADERALESQKKQRTAAWALSPNHGIVFDDSWKIVDDLEILIKRLKAKQAKDGKLKADNLDAHSDAGWSRELGPSSELSEKRVFWEESGHDYASFLKELEALRTRADRARSRDEAFDGHMVIGRVLYEHQLFKEALVSFNRACELLPTDVKPHFRAGNCFYVLGKYKEAKEEFLLAVEAAEAGGNQWGYLLPQIYVNLGIALEGEGSGRVDLGLFFAVLAPICNGPPETRKRVAYDALVWRHVNEGGTQIRKLDAVKYIKLLRAIYVPIEGSSEIVEVHGHTDNSIVSFTEFLVMFDDPDRGFGIMSTMLKLETGDRNRHGNHVCSVCRYPIIGSRFKEMKSHFSLCNQCYSEGKVPPSCKQEAYRFKEYGSEGEAVKDKCFCFAMQSHDDS
BLAST of Cp4.1LG06g00840 vs. Swiss-Prot
Match: Y1515_ARATH (Uncharacterized TPR repeat-containing protein At1g05150 OS=Arabidopsis thaliana GN=At1g05150 PE=1 SV=1) HSP 1 Score: 521.2 bits (1341), Expect = 1.3e-146 Identity = 256/324 (79.01%), Postives = 289/324 (89.20%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. Swiss-Prot
Match: Y2245_ARATH (Uncharacterized TPR repeat-containing protein At2g32450 OS=Arabidopsis thaliana GN=At2g32450 PE=1 SV=1) HSP 1 Score: 515.0 bits (1325), Expect = 9.3e-145 Identity = 252/322 (78.26%), Postives = 290/322 (90.06%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. TrEMBL
Match: A0A0A0M0F9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690180 PE=4 SV=1) HSP 1 Score: 586.3 bits (1510), Expect = 3.6e-164 Identity = 291/321 (90.65%), Postives = 305/321 (95.02%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. TrEMBL
Match: W9R7E9_9ROSA (Putative TPR repeat-containing protein OS=Morus notabilis GN=L484_016019 PE=4 SV=1) HSP 1 Score: 560.1 bits (1442), Expect = 2.8e-156 Identity = 274/321 (85.36%), Postives = 299/321 (93.15%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. TrEMBL
Match: B9H4I9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s25620g PE=4 SV=1) HSP 1 Score: 559.3 bits (1440), Expect = 4.8e-156 Identity = 274/320 (85.62%), Postives = 299/320 (93.44%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. TrEMBL
Match: V9M4V0_MANES (Cold regulated protein 15b OS=Manihot esculenta GN=COR15b PE=2 SV=1) HSP 1 Score: 558.9 bits (1439), Expect = 6.2e-156 Identity = 273/321 (85.05%), Postives = 297/321 (92.52%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. TrEMBL
Match: A0A067L3C1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04514 PE=4 SV=1) HSP 1 Score: 557.8 bits (1436), Expect = 1.4e-155 Identity = 272/321 (84.74%), Postives = 298/321 (92.83%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. TAIR10
Match: AT1G05150.1 (AT1G05150.1 Calcium-binding tetratricopeptide family protein) HSP 1 Score: 521.2 bits (1341), Expect = 7.3e-148 Identity = 256/324 (79.01%), Postives = 289/324 (89.20%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. TAIR10
Match: AT2G32450.1 (AT2G32450.1 Calcium-binding tetratricopeptide family protein) HSP 1 Score: 515.0 bits (1325), Expect = 5.2e-146 Identity = 252/322 (78.26%), Postives = 290/322 (90.06%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. NCBI nr
Match: gi|659125475|ref|XP_008462701.1| (PREDICTED: uncharacterized TPR repeat-containing protein At1g05150-like [Cucumis melo]) HSP 1 Score: 590.1 bits (1520), Expect = 3.6e-165 Identity = 294/321 (91.59%), Postives = 305/321 (95.02%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. NCBI nr
Match: gi|778664340|ref|XP_004142533.2| (PREDICTED: uncharacterized TPR repeat-containing protein At1g05150-like [Cucumis sativus]) HSP 1 Score: 586.3 bits (1510), Expect = 5.2e-164 Identity = 291/321 (90.65%), Postives = 305/321 (95.02%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. NCBI nr
Match: gi|703095464|ref|XP_010095545.1| (putative TPR repeat-containing protein [Morus notabilis]) HSP 1 Score: 560.1 bits (1442), Expect = 4.0e-156 Identity = 274/321 (85.36%), Postives = 299/321 (93.15%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. NCBI nr
Match: gi|743903599|ref|XP_011045150.1| (PREDICTED: uncharacterized TPR repeat-containing protein At1g05150-like [Populus euphratica]) HSP 1 Score: 560.1 bits (1442), Expect = 4.0e-156 Identity = 274/320 (85.62%), Postives = 299/320 (93.44%), Query Frame = 1
BLAST of Cp4.1LG06g00840 vs. NCBI nr
Match: gi|224085786|ref|XP_002307696.1| (hypothetical protein POPTR_0005s25620g [Populus trichocarpa]) HSP 1 Score: 559.3 bits (1440), Expect = 6.9e-156 Identity = 274/320 (85.62%), Postives = 299/320 (93.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |