Cp4.1LG04g03950 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGTGGAGATATTGGACAGTGCCACCATTGTCAACTTCGTCGAAGATGAGGCAGCCTTTGGTGCCTGCATAGGAGACCGGTTTGCTCACCTCGACACGAATCATGACGGTCTCCTTTCCTATAGTGAGATGTTGAAGGAGTTGCAGAGCCTCAGGGTCATCGAGGCCGATTTTGGAATCGACGTGAAGCCTGATCCAGATGAGCTTTCTTCTGTCTATAGTTCTATGTTTTTGCAGTTTGATCGTAACTCGAGTGGAACGGTTGATCTGGATGAGTTTAAGGCTGAGAACAAAAGGATGATGCTAGCTATGGCTAATGGGATTGGAGCTTTACCTGTTCAAATGGTGCTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAGTTGCTATAATGACAACTTGA ATGAGTGTGGAGATATTGGACAGTGCCACCATTGTCAACTTCGTCGAAGATGAGGCAGCCTTTGGTGCCTGCATAGGAGACCGGTTTGCTCACCTCGACACGAATCATGACGGTCTCCTTTCCTATAGTGAGATGTTGAAGGAGTTGCAGAGCCTCAGGGTCATCGAGGCCGATTTTGGAATCGACGTGAAGCCTGATCCAGATGAGCTTTCTTCTGTCTATAGTTCTATGTTTTTGCAGTTTGATCGTAACTCGAGTGGAACGGTTGATCTGGATGAGTTTAAGGCTGAGAACAAAAGGATGATGCTAGCTATGGCTAATGGGATTGGAGCTTTACCTGTTCAAATGGTGCTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAGTTGCTATAATGACAACTTGA ATGAGTGTGGAGATATTGGACAGTGCCACCATTGTCAACTTCGTCGAAGATGAGGCAGCCTTTGGTGCCTGCATAGGAGACCGGTTTGCTCACCTCGACACGAATCATGACGGTCTCCTTTCCTATAGTGAGATGTTGAAGGAGTTGCAGAGCCTCAGGGTCATCGAGGCCGATTTTGGAATCGACGTGAAGCCTGATCCAGATGAGCTTTCTTCTGTCTATAGTTCTATGTTTTTGCAGTTTGATCGTAACTCGAGTGGAACGGTTGATCTGGATGAGTTTAAGGCTGAGAACAAAAGGATGATGCTAGCTATGGCTAATGGGATTGGAGCTTTACCTGTTCAAATGGTGCTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAGTTGCTATAATGACAACTTGA MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSYSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKRMMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
BLAST of Cp4.1LG04g03950 vs. TrEMBL
Match: A0A0A0KHT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G418660 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 2.0e-56 Identity = 116/134 (86.57%), Postives = 123/134 (91.79%), Query Frame = 1
BLAST of Cp4.1LG04g03950 vs. TrEMBL
Match: A0A0A0K3B2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037625 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 9.6e-51 Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 1
BLAST of Cp4.1LG04g03950 vs. TrEMBL
Match: A0A061DTS7_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_002258 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.4e-49 Identity = 102/131 (77.86%), Postives = 116/131 (88.55%), Query Frame = 1
BLAST of Cp4.1LG04g03950 vs. TrEMBL
Match: V4U9W3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018069mg PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.2e-48 Identity = 99/131 (75.57%), Postives = 118/131 (90.08%), Query Frame = 1
BLAST of Cp4.1LG04g03950 vs. TrEMBL
Match: A0A0D2M0N6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G194900 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 7.6e-48 Identity = 100/131 (76.34%), Postives = 113/131 (86.26%), Query Frame = 1
BLAST of Cp4.1LG04g03950 vs. TAIR10
Match: AT2G44310.1 (AT2G44310.1 Calcium-binding EF-hand family protein) HSP 1 Score: 125.9 bits (315), Expect = 1.9e-29 Identity = 60/135 (44.44%), Postives = 99/135 (73.33%), Query Frame = 1
BLAST of Cp4.1LG04g03950 vs. NCBI nr
Match: gi|778716395|ref|XP_011657544.1| (PREDICTED: uncharacterized protein LOC105435869 [Cucumis sativus]) HSP 1 Score: 226.5 bits (576), Expect = 2.9e-56 Identity = 116/134 (86.57%), Postives = 123/134 (91.79%), Query Frame = 1
BLAST of Cp4.1LG04g03950 vs. NCBI nr
Match: gi|659097011|ref|XP_008449396.1| (PREDICTED: uncharacterized protein LOC103491294 [Cucumis melo]) HSP 1 Score: 224.9 bits (572), Expect = 8.3e-56 Identity = 115/134 (85.82%), Postives = 122/134 (91.04%), Query Frame = 1
BLAST of Cp4.1LG04g03950 vs. NCBI nr
Match: gi|659110959|ref|XP_008455501.1| (PREDICTED: uncharacterized protein LOC103495653 [Cucumis melo]) HSP 1 Score: 218.0 bits (554), Expect = 1.0e-53 Identity = 114/135 (84.44%), Postives = 119/135 (88.15%), Query Frame = 1
BLAST of Cp4.1LG04g03950 vs. NCBI nr
Match: gi|778723608|ref|XP_011658679.1| (PREDICTED: uncharacterized protein LOC105436072 [Cucumis sativus]) HSP 1 Score: 207.6 bits (527), Expect = 1.4e-50 Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 1
BLAST of Cp4.1LG04g03950 vs. NCBI nr
Match: gi|590711914|ref|XP_007049241.1| (Calcium-binding EF-hand family protein [Theobroma cacao]) HSP 1 Score: 203.0 bits (515), Expect = 3.4e-49 Identity = 102/131 (77.86%), Postives = 116/131 (88.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |