Cp4.1LG04g02040 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGGTCTTGATGCTGAGACCTCTTTAATGGATCTTCTTCTTCGTTTTCAAATTAACCCTCAGAGAATTTGATATTTCGTTTTTGTCCTGTTTTTGGGAGAGGGATTATGGGAAGAACAAGAGGGGTTTCAGTTGCAATGGCATTGTTCTGTGTTCTTCTTGTTGTTCTTCAGAGCTTCTCTTTGGTGTGTGGCCTCACTTATAGCTATCAACATGTTAGTAGCTTGAGATTTTACAGGATTCAAAACCATTTGGACTCCATTAACAAGCCTCCTCTTCTCACCATTCAGGTTCATTCTTATATATATATATATATATATATATATATCTATATATTTGTTGGGTTTTTTTCTGTTTTTCTTTTATATCTTATCTTTGTTCTTATTTGGGTCTCCAAATATTTGAATTTTATGTAATGGGTATGTCAAAGTTCTAAGCTTTCTATATGTTTATGTTGTTTTTTCAAAGATTTTGTGGATTTTTCTTCTTTTTTTCATTTGGGTCTCCTCAAATTTGAATTTTGTGTAATGGGTATGTCAAATTTCTAAGCTTTCTATATGTTTATGTTGTTTTTTCAAAGATTTTGTGGATTTTACTTATTTTTTTCATTTGGGTCTCCAAAAATTTGCATTTTGTGTAATGGGTATGTCAAATTCCTAAGCTTTCTATATGTTTATGTTGTTTTTTTCAAAGATTTTTTGGATTTTTCTTCTTTTTTTTTTCATTTGGGTCTCCAAAAATTTGCATTTTGTGTAATGGGTATGTCAATGTTCTAAGCTTTCTATATGTTTATGTTGTTTTTTTCAAAGATTTTTTGGATTTTTCTTCTTTTTTTTCATTTGGGTCTCCAAAATTTTAAATTTTATGTAATGGGTATGTCAAATTAATGACAGGGTTTTTTTTTCAGCTTTTCTCTTATATTTTCCATTTATTTATTAAATTAAATAAATAAAAAACCATTTATTCATTAATTTTTACTTTTATTTGTTTTTTTTTTTAAAAAAAAAATTCAGAGCCCAGATGGTGATATTATAGATTGTGTTCATAAAAGAAAACAGCCAGCTCTGGATCATCCCCTCTTGAAGAACCACAAAATTCAGGTCCAAAAAAAAATTAATAATTATCTCTATTTATTTTCTAAATATTCATATTAAATTTATTAAAAAATTTAAAATTAAATAATTAAATAATATTATTAATGTATTTGTGCAGAGAGCACCAACAGGGTGGCCGAAAATGAAGAAGAATGAACGGAGGGCAGGATCAGGTGCGGGAGGTCCATTTCAAACTTGGCATGTGAACGCGACACGGTGTCCAAAGGGAACTATTCCGGTGCGGCGCAGCACAGTGAAGGATGTGTTAAGAGCCAAGTCTTTGTTTGACTTTGGGAAGAAGAAACGACCGATTCTGCTTGATCGACAAATGGACGCTCCTGATGTGGTCAGTGGGAATGGTCACGAGGTACGCTATTATCTTTTCTTCAAAGCATTTAATAAATTGAAAAATGGGAGTTTTTATGAATAGATTCTTTTTCTTTACTTCAACTCCATGTTTTAATAATAAATAAATACACTTTTTACCTTTATATTAAATTAAATTAAAAAATAATTTTTAAAAATAAAAAAACTCGGAGTATTTTTTAAAAATTATTTTAAAAGTTTAAAAGTATTTTTGAAACAGTTCTACTGGAATGTCTTTGAACTTTTTTTTAAATTTTAATGATATTTTTTTTAACATTTTTTATTAAAAATTTAATAATATTTTTTAGACCATGTTTATAAATTTATTAAATATAAACTTAAGATTTTAATAACGTATTAAATATTAAATATTTATAATGTAGTACAATTTTAAATATATTTGACGTGAACGATTGCATATAAAATAGCATGCGATCGCATACACTAGATCGCCTGGGGAGATGTACGGAGCGAAGGCGACGATAAACGTGTGGGAACCGTCCATCCAAATGGTCAACGAGTTCAGCCTCTCTCAGATTTGGATCCTCTCTGGATCATTTGACGGCTCAGATCTCAACAGTATAGAGGCTGGTTGGCAGGTACTTTTTCCATTTCCTACATCCTCCCGCAGACAATCCTACCCCTCATCCTAAAAAAAATTAATTGCTATTTTTTTTACTATTTATCATATAATATTAATATTATTAAATTACACTATCATTAGTAAGAATTTATTATAATCAAAATAAAATATTCAAAAATTAAATAATATAATATGAAAGTATATATATATATATATATATATATATATATATATATATATATATATTATAATCAAATTATAATTCTTCTCGACCAAGAATTAATATTTACGCTTGTACTAAAAGAATTAATATTATTTTTTTTAGAGTTTTTTGAGTTTTCTAAAGTTTTGATTATTCTACTAGTCAGGTTAGTCCGGAGCTTTATGGTGACAGCAGACCGAGATTGTTCACATATTGGACGGTCAGATCTCTATTCTATATTTTTAAATTTTGA TGGTCTTGATGCTGAGACCTCTTTAATGGATCTTCTTCTTCGTTTTCAAATTAACCCTCAGAGAATTTGATATTTCGTTTTTGTCCTGTTTTTGGGAGAGGGATTATGGGAAGAACAAGAGGGGTTTCAGTTGCAATGGCATTGTTCTGTGTTCTTCTTGTTGTTCTTCAGAGCTTCTCTTTGGTGTGTGGCCTCACTTATAGCTATCAACATGTTAGTAGCTTGAGATTTTACAGGATTCAAAACCATTTGGACTCCATTAACAAGCCTCCTCTTCTCACCATTCAGAGAGCACCAACAGGGTGGCCGAAAATGAAGAAGAATGAACGGAGGGCAGGATCAGGTGCGGGAGGTCCATTTCAAACTTGGCATGTGAACGCGACACGGTGTCCAAAGGGAACTATTCCGGTGCGGCGCAGCACAGTGAAGGATGTGTTAAGAGCCAAGTCTTTGTTTGACTTTGGGAAGAAGAAACGACCGATTCTGCTTGATCGACAAATGGACGCTCCTGATGTGGTCAGTGGGAATGGTCACGAGGTTAGTCCGGAGCTTTATGGTGACAGCAGACCGAGATTGTTCACATATTGGACGGTCAGATCTCTATTCTATATTTTTAAATTTTGA ATGGGAAGAACAAGAGGGGTTTCAGTTGCAATGGCATTGTTCTGTGTTCTTCTTGTTGTTCTTCAGAGCTTCTCTTTGGTGTGTGGCCTCACTTATAGCTATCAACATGTTAGTAGCTTGAGATTTTACAGGATTCAAAACCATTTGGACTCCATTAACAAGCCTCCTCTTCTCACCATTCAGAGAGCACCAACAGGGTGGCCGAAAATGAAGAAGAATGAACGGAGGGCAGGATCAGGTGCGGGAGGTCCATTTCAAACTTGGCATGTGAACGCGACACGGTGTCCAAAGGGAACTATTCCGGTGCGGCGCAGCACAGTGAAGGATGTGTTAAGAGCCAAGTCTTTGTTTGACTTTGGGAAGAAGAAACGACCGATTCTGCTTGATCGACAAATGGACGCTCCTGATGTGGTCAGTGGGAATGGTCACGAGGTTAGTCCGGAGCTTTATGGTGACAGCAGACCGAGATTGTTCACATATTGGACGGTCAGATCTCTATTCTATATTTTTAAATTTTGA MGRTRGVSVAMALFCVLLVVLQSFSLVCGLTYSYQHVSSLRFYRIQNHLDSINKPPLLTIQRAPTGWPKMKKNERRAGSGAGGPFQTWHVNATRCPKGTIPVRRSTVKDVLRAKSLFDFGKKKRPILLDRQMDAPDVVSGNGHEVSPELYGDSRPRLFTYWTVRSLFYIFKF
BLAST of Cp4.1LG04g02040 vs. TrEMBL
Match: A0A0A0LXY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665910 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 2.2e-44 Identity = 110/201 (54.73%), Postives = 127/201 (63.18%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. TrEMBL
Match: A0A067JIS0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23580 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.3e-32 Identity = 90/194 (46.39%), Postives = 109/194 (56.19%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. TrEMBL
Match: A0A067EBA3_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0136581mg PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.9e-28 Identity = 88/186 (47.31%), Postives = 104/186 (55.91%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. TrEMBL
Match: W9S6M2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024471 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 4.9e-28 Identity = 88/215 (40.93%), Postives = 109/215 (50.70%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. TrEMBL
Match: B9S7P7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0610400 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 6.4e-28 Identity = 78/181 (43.09%), Postives = 101/181 (55.80%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. TAIR10
Match: AT5G18460.1 (AT5G18460.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 124.8 bits (312), Expect = 5.2e-29 Identity = 71/160 (44.38%), Postives = 89/160 (55.62%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. TAIR10
Match: AT1G10750.1 (AT1G10750.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 67.8 bits (164), Expect = 7.5e-12 Identity = 64/227 (28.19%), Postives = 83/227 (36.56%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. TAIR10
Match: AT1G23340.1 (AT1G23340.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 65.5 bits (158), Expect = 3.7e-11 Identity = 64/239 (26.78%), Postives = 89/239 (37.24%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. TAIR10
Match: AT1G70550.1 (AT1G70550.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 63.5 bits (153), Expect = 1.4e-10 Identity = 62/231 (26.84%), Postives = 88/231 (38.10%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. TAIR10
Match: AT5G50150.1 (AT5G50150.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 61.6 bits (148), Expect = 5.4e-10 Identity = 53/192 (27.60%), Postives = 73/192 (38.02%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. NCBI nr
Match: gi|659086085|ref|XP_008443756.1| (PREDICTED: uncharacterized protein LOC103487273 [Cucumis melo]) HSP 1 Score: 188.3 bits (477), Expect = 1.1e-44 Identity = 111/202 (54.95%), Postives = 125/202 (61.88%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. NCBI nr
Match: gi|778664243|ref|XP_011660253.1| (PREDICTED: uncharacterized protein LOC101208882 [Cucumis sativus]) HSP 1 Score: 186.8 bits (473), Expect = 3.2e-44 Identity = 110/201 (54.73%), Postives = 127/201 (63.18%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. NCBI nr
Match: gi|729425156|ref|XP_010558946.1| (PREDICTED: uncharacterized protein LOC104827472 [Tarenaya hassleriana]) HSP 1 Score: 169.1 bits (427), Expect = 6.8e-39 Identity = 97/203 (47.78%), Postives = 117/203 (57.64%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. NCBI nr
Match: gi|802759628|ref|XP_012089385.1| (PREDICTED: uncharacterized protein LOC105647773 isoform X1 [Jatropha curcas]) HSP 1 Score: 146.4 bits (368), Expect = 4.7e-32 Identity = 90/194 (46.39%), Postives = 109/194 (56.19%), Query Frame = 1
BLAST of Cp4.1LG04g02040 vs. NCBI nr
Match: gi|802759631|ref|XP_012089386.1| (PREDICTED: uncharacterized protein LOC105647773 isoform X2 [Jatropha curcas]) HSP 1 Score: 146.4 bits (368), Expect = 4.7e-32 Identity = 90/194 (46.39%), Postives = 109/194 (56.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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