Cp4.1LG04g01520 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g01520
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	S-protein, putative
Location	Cp4.1LG04 : 539333 .. 539839 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATGCATCGGCCTATGTTATTGCTCGTGCTCGTGCTCGTGCTCATAGCCTCCTCTCACTTTTCGATGGTCGCAACCAGCTCGAAATACAAAAATAAGGTCCCAAAACCCAGAAAGACAAAGCCCAAATTTCCAGAACCAAACAACCCTTATTCTGCCTTTCAGCATTTTAGTGTAGAGATCCATAACGACTTGCATATGTTCATATTGGATTCCCATTGCACCTCGAAAGATGATGATTTAGGGTTACATATATTGTTCCCGGATGAGGAACAAAATTGGTCATTTCATGATAATTGGTTAGACTCTACGGATTTTCATTGTAAATTGGAGTGGCAATATGGGCTTTTAGAATTTGAAGCCTTTTATAGCAACCATGGTAAGTTTTTGGTCGATCATTGCGCCAACTCAACCTGCATTTGGAGTGCGAGACAAGATGGGGTTTATTTGAACAATAAAGATGATGAACTTGTTTTGTATGATTATTGGGATATGCTTGGATAG

mRNA sequence

ATGGTGATGCATCGGCCTATGTTATTGCTCGTGCTCGTGCTCGTGCTCATAGCCTCCTCTCACTTTTCGATGGTCGCAACCAGCTCGAAATACAAAAATAAGGTCCCAAAACCCAGAAAGACAAAGCCCAAATTTCCAGAACCAAACAACCCTTATTCTGCCTTTCAGCATTTTAGTGTAGAGATCCATAACGACTTGCATATGTTCATATTGGATTCCCATTGCACCTCGAAAGATGATGATTTAGGGTTACATATATTGTTCCCGGATGAGGAACAAAATTGGTCATTTCATGATAATTGGTTAGACTCTACGGATTTTCATTGTAAATTGGAGTGGCAATATGGGCTTTTAGAATTTGAAGCCTTTTATAGCAACCATGGTAAGTTTTTGGTCGATCATTGCGCCAACTCAACCTGCATTTGGAGTGCGAGACAAGATGGGGTTTATTTGAACAATAAAGATGATGAACTTGTTTTGTATGATTATTGGGATATGCTTGGATAG

Coding sequence (CDS)

ATGGTGATGCATCGGCCTATGTTATTGCTCGTGCTCGTGCTCGTGCTCATAGCCTCCTCTCACTTTTCGATGGTCGCAACCAGCTCGAAATACAAAAATAAGGTCCCAAAACCCAGAAAGACAAAGCCCAAATTTCCAGAACCAAACAACCCTTATTCTGCCTTTCAGCATTTTAGTGTAGAGATCCATAACGACTTGCATATGTTCATATTGGATTCCCATTGCACCTCGAAAGATGATGATTTAGGGTTACATATATTGTTCCCGGATGAGGAACAAAATTGGTCATTTCATGATAATTGGTTAGACTCTACGGATTTTCATTGTAAATTGGAGTGGCAATATGGGCTTTTAGAATTTGAAGCCTTTTATAGCAACCATGGTAAGTTTTTGGTCGATCATTGCGCCAACTCAACCTGCATTTGGAGTGCGAGACAAGATGGGGTTTATTTGAACAATAAAGATGATGAACTTGTTTTGTATGATTATTGGGATATGCTTGGATAG

Protein sequence

MVMHRPMLLLVLVLVLIASSHFSMVATSSKYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVDHCANSTCIWSARQDGVYLNNKDDELVLYDYWDMLG

Homology

[Close]

BLAST of Cp4.1LG04g01520 vs. TrEMBL
Match: A0A0A0KL79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G016040 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 86/138 (62.32%), Postives = 102/138 (73.91%), Query Frame = 1


Query: 30  KYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFP 89
           K KNK P P     K   PNNP   F+ F+VEIHNDL MFILDSHC SKDDDLGLHILFP
Sbjct: 5   KAKNKSPTP-----KLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFP 64

Query: 90  DEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVDHCANSTCIWSARQDGV 149
           DE+Q+WSF  NW+ +T FHC+LEW+ G LEF++F S    F+ ++C N TCIWSARQDGV
Sbjct: 65  DEKQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKS-APDFVTNYCGNQTCIWSARQDGV 124

Query: 150 YLNNKDDELVLYDYWDML 168
           YLNN   E V Y+YW+M+
Sbjct: 125 YLNNAAGEQVFYNYWEMI 136

[Close]

BLAST of Cp4.1LG04g01520 vs. TrEMBL
Match: A0A0A0KSN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G538550 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.9e-34
Identity = 80/161 (49.69%), Postives = 98/161 (60.87%), Query Frame = 1


Query: 7   MLLLVLVLVLIASSHFSMVATSSKYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDL 66
           +L+L++ L LI     SM   S                F    +      H+ +EIHNDL
Sbjct: 5   LLVLLIFLFLIVLFDMSMARFS----------------FAPQKSSIIQLHHYQIEIHNDL 64

Query: 67  HMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSN 126
            M++LDSHC SKD+DLGLHILFP E Q+WSF DN  ++T F C LEW+ GLLEF++F +N
Sbjct: 65  EMYLLDSHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFKTN 124

Query: 127 HGKFLVDHCANSTCIWSARQDGVYLNNKDDELVLYDYWDML 168
           H  FL + C N TC WSARQDGVYL N   E V  DYWDML
Sbjct: 125 H-NFLNNFCGNLTCSWSARQDGVYLTNVKGEYVFQDYWDML 148

[Close]

BLAST of Cp4.1LG04g01520 vs. TrEMBL
Match: A0A0A0KIQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G017790 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.1e-30
Identity = 69/131 (52.67%), Postives = 92/131 (70.23%), Query Frame = 1


Query: 7   MLLLVLVLVLIASSHFSMVATSSKYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDL 66
           ++ L+LVL+L+ S + SM       K K  K +  KP  P+PNNP  +F+ F VEIHNDL
Sbjct: 6   LMPLLLVLLLLTSFNVSMA------KKKKAKSKTEKPDLPDPNNPIVSFEKFRVEIHNDL 65

Query: 67  HMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSN 126
           +M++LDS C SKDD+ GLH+LFPDE+QNWSF  NW D+T FHC+LEW+ G LEF++F S+
Sbjct: 66  NMYLLDSRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIGYLEFDSFKSD 125

Query: 127 HGKFLVDHCAN 138
              F+ D C N
Sbjct: 126 PA-FVTDFCCN 129

[Close]

BLAST of Cp4.1LG04g01520 vs. TrEMBL
Match: M5VMC1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024473mg PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.2e-16
Identity = 47/102 (46.08%), Postives = 61/102 (59.80%), Query Frame = 1


Query: 52  YSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKL 111
           YS F  + V I N L    L +HC SKDDDLG+H L  D+E +W F  N+ D T + C L
Sbjct: 26  YSLFNKYRVHIINGLTNETLTAHCKSKDDDLGVHELAVDQEFSWEFRINFFDRTLYFCNL 85

Query: 112 EWQYGLLEFEAFYSNHGKFLVDHCANSTCIWSARQDGVYLNN 154
            W  G   F+AF  +  K L++ C++S C+W AR DGVYL N
Sbjct: 86  VWNGGHKTFDAFLVDE-KALLNSCSSSDCMWRARDDGVYLFN 126

[Close]

BLAST of Cp4.1LG04g01520 vs. TrEMBL
Match: B9SUI5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0573340 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.6e-15
Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 1


Query: 52  YSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKL 111
           +  F  + V + N L   +L +HC S +DDLG+H L P +EQ W+F  N   +T F C L
Sbjct: 26  FEIFPKYHVHVVNGLKKHLLQTHCVSVNDDLGVHDLAPRQEQVWAFRINISFNTRFECTL 85

Query: 112 EWQYGLLEFEAFYS--NHGKFLVDHCANSTCIWSARQDGVYL 152
            W+ G   F+AFY   +   F+ +HC N  C W A++DG+YL
Sbjct: 86  SWKGGKKRFDAFYPWFDGVNFMREHCVNYNCYWRAQEDGIYL 127

[Close]

BLAST of Cp4.1LG04g01520 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09
Identity = 34/94 (36.17%), Postives = 48/94 (51.06%), Query Frame = 1


Query: 74  HCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVD 133
           HC SK+DDLG   L      +W+F +N L ST F C +    G +    F+ +    L  
Sbjct: 58  HCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDD--VILFH 117

Query: 134 HCANSTCIWSARQDGVYL-NNKDDELVLYDYWDM 167
            C    CIW+A+ DG+YL N+   E VL   W++
Sbjct: 118 RCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]

BLAST of Cp4.1LG04g01520 vs. TAIR10
Match: AT5G38440.1 (AT5G38440.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09
Identity = 37/96 (38.54%), Postives = 53/96 (55.21%), Query Frame = 1


Query: 70  ILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEA-FYSNHG 129
           +L  HCTS +D+LG H L P E  ++SFHD+ + S DF+C+L WQ    +F A F +  G
Sbjct: 41  VLKIHCTS-EDNLGFHFLRPGETYDFSFHDSIVRS-DFYCEL-WQGPNFKFHASFMAYQG 100

Query: 130 KFLVDHCANSTCIWSARQDGVYLNNKDDELVLYDYW 165
             L+ H       W AR+DG+Y  +  +   L   W
Sbjct: 101 GGLIVHYGKKN-FWDAREDGIYFTHGKETPKLEYKW 132

[Close]

BLAST of Cp4.1LG04g01520 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 58.9 bits (141), Expect = 3.4e-09
Identity = 35/108 (32.41%), Postives = 56/108 (51.85%), Query Frame = 1


Query: 49  NNPYSAFQHFSVEIHNDL-HMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDF 108
           +N +       V + N L H  +L  HC SKDDDLG HIL   ++  ++F DN   +T F
Sbjct: 18  SNAFHEIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSF 77

Query: 109 HCKLEWQYGL---LEFEAFYSNHGKFLVDHCANSTCIWSARQDGVYLN 153
            C+++        L+F A+ ++  K L      ++C W  R+DG+Y +
Sbjct: 78  SCQMDQGPNFKHHLDFVAYETSWSKAL-----EASCKWIGREDGIYFS 120

[Close]

BLAST of Cp4.1LG04g01520 vs. TAIR10
Match: AT2G23148.1 (AT2G23148.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 58.9 bits (141), Expect = 3.4e-09
Identity = 40/104 (38.46%), Postives = 53/104 (50.96%), Query Frame = 1


Query: 70  ILDSHCTSKDDDLGLHILFPDEE-QNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHG 129
           +L  HCTSKDDDLG H L P  +   + FHD+ L  T F C+L WQ G      FY+N  
Sbjct: 39  VLKIHCTSKDDDLGYHYLRPGVQIYEFRFHDSVL-KTKFDCEL-WQ-GRGPTYKFYANFR 98

Query: 130 KF----LVDHCANSTCIWSARQDGVYLNNKDDELVLYDYWDMLG 169
            +    L+ H      IW AR+DG+Y  +  +   L   W  +G
Sbjct: 99  AYKSGGLIAHYGKKN-IWEAREDGIYFTHGKEIPKLEYKWSPIG 138

[Close]

BLAST of Cp4.1LG04g01520 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08
Identity = 33/93 (35.48%), Postives = 52/93 (55.91%), Query Frame = 1


Query: 74  HCTSKDDDLG-LHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLV 133
           HC SK++DLG +++ F D   +W+F +N L ST F C +    G +  + F+ +    L 
Sbjct: 58  HCKSKENDLGDINLKFLDRF-SWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDD--VILF 117

Query: 134 DHCANSTCIWSARQDGVYL-NNKDDELVLYDYW 165
             C    C+W+A+ DG+YL N+   E VL + W
Sbjct: 118 HRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Cp4.1LG04g01520 vs. NCBI nr
Match: gi|700194417|gb|KGN49594.1| (hypothetical protein Csa_5G016040 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 2.0e-43
Identity = 86/138 (62.32%), Postives = 102/138 (73.91%), Query Frame = 1


Query: 30  KYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFP 89
           K KNK P P     K   PNNP   F+ F+VEIHNDL MFILDSHC SKDDDLGLHILFP
Sbjct: 5   KAKNKSPTP-----KLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFP 64

Query: 90  DEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVDHCANSTCIWSARQDGV 149
           DE+Q+WSF  NW+ +T FHC+LEW+ G LEF++F S    F+ ++C N TCIWSARQDGV
Sbjct: 65  DEKQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKS-APDFVTNYCGNQTCIWSARQDGV 124

Query: 150 YLNNKDDELVLYDYWDML 168
           YLNN   E V Y+YW+M+
Sbjct: 125 YLNNAAGEQVFYNYWEMI 136

[Close]

BLAST of Cp4.1LG04g01520 vs. NCBI nr
Match: gi|659134192|ref|XP_008467075.1| (PREDICTED: uncharacterized protein LOC103504513, partial [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 8.4e-42
Identity = 82/136 (60.29%), Postives = 101/136 (74.26%), Query Frame = 1


Query: 32  KNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFPDE 91
           + K PK R  KP  P PNNP  +F+ F VEIHN+L  +ILDS C SKDDDLGLH L+P+E
Sbjct: 13  QKKSPKNRVPKPDLPLPNNPLVSFEGFRVEIHNELLTYILDSSCYSKDDDLGLHRLYPNE 72

Query: 92  EQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVDHCANSTCIWSARQDGVYL 151
           +QNWSF  NW+ +TDFHCKLEW+   LEF++F S+   F+ ++C N TCIWSARQDGVYL
Sbjct: 73  QQNWSFKGNWIATTDFHCKLEWEIAYLEFDSFKSD-PDFVTNYCGNRTCIWSARQDGVYL 132

Query: 152 NNKDDELVLYDYWDML 168
           NN   + V YDYW+ML
Sbjct: 133 NNAVGQQVFYDYWEML 147

[Close]

BLAST of Cp4.1LG04g01520 vs. NCBI nr
Match: gi|659105271|ref|XP_008453055.1| (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo])

HSP 1 Score: 165.2 bits (417), Expect = 9.6e-38
Identity = 71/131 (54.20%), Postives = 99/131 (75.57%), Query Frame = 1


Query: 37  KPRKTKPKFPEPNNPYSAFQHFSVEIHNDLHMFILDSHCTSKDDDLGLHILFPDEEQNWS 96
           K ++T P+ P+P+ P   F  F++ I+N+L M++LDSHC SKDDDLG  +L+P++EQ+WS
Sbjct: 9   KSQETGPELPKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSWS 68

Query: 97  FHDNWLDSTDFHCKLEWQYGLLEFEAFYSNHGKFLVDHCANSTCIWSARQDGVYLNNKDD 156
           F  NWL +T+FHCKLEW+ G LEF+AF SN  KFL + CA S+C WSARQDGVYL N++ 
Sbjct: 69  FRGNWLGTTNFHCKLEWENGYLEFDAF-SNDVKFLTNFCAKSSCCWSARQDGVYLTNQNG 128

Query: 157 ELVLYDYWDML 168
           ++V    W+M+
Sbjct: 129 QVVFNQNWEMI 138

[Close]

BLAST of Cp4.1LG04g01520 vs. NCBI nr
Match: gi|700196255|gb|KGN51432.1| (hypothetical protein Csa_5G538550 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 8.4e-34
Identity = 80/161 (49.69%), Postives = 98/161 (60.87%), Query Frame = 1


Query: 7   MLLLVLVLVLIASSHFSMVATSSKYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDL 66
           +L+L++ L LI     SM   S                F    +      H+ +EIHNDL
Sbjct: 5   LLVLLIFLFLIVLFDMSMARFS----------------FAPQKSSIIQLHHYQIEIHNDL 64

Query: 67  HMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSN 126
            M++LDSHC SKD+DLGLHILFP E Q+WSF DN  ++T F C LEW+ GLLEF++F +N
Sbjct: 65  EMYLLDSHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFKTN 124

Query: 127 HGKFLVDHCANSTCIWSARQDGVYLNNKDDELVLYDYWDML 168
           H  FL + C N TC WSARQDGVYL N   E V  DYWDML
Sbjct: 125 H-NFLNNFCGNLTCSWSARQDGVYLTNVKGEYVFQDYWDML 148

[Close]

BLAST of Cp4.1LG04g01520 vs. NCBI nr
Match: gi|700194418|gb|KGN49595.1| (hypothetical protein Csa_5G017790 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 7.4e-30
Identity = 69/131 (52.67%), Postives = 92/131 (70.23%), Query Frame = 1


Query: 7   MLLLVLVLVLIASSHFSMVATSSKYKNKVPKPRKTKPKFPEPNNPYSAFQHFSVEIHNDL 66
           ++ L+LVL+L+ S + SM       K K  K +  KP  P+PNNP  +F+ F VEIHNDL
Sbjct: 6   LMPLLLVLLLLTSFNVSMA------KKKKAKSKTEKPDLPDPNNPIVSFEKFRVEIHNDL 65

Query: 67  HMFILDSHCTSKDDDLGLHILFPDEEQNWSFHDNWLDSTDFHCKLEWQYGLLEFEAFYSN 126
           +M++LDS C SKDD+ GLH+LFPDE+QNWSF  NW D+T FHC+LEW+ G LEF++F S+
Sbjct: 66  NMYLLDSRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIGYLEFDSFKSD 125

Query: 127 HGKFLVDHCAN 138
              F+ D C N
Sbjct: 126 PA-FVTDFCCN 129

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g01520 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g01520 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL79_CUCSA	1.4e-43	62.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G016040 PE=4 SV=1	[more]
A0A0A0KSN2_CUCSA	5.9e-34	49.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G538550 PE=4 SV=1	[more]
A0A0A0KIQ4_CUCSA	5.1e-30	52.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G017790 PE=4 SV=1	[more]
M5VMC1_PRUPE	3.2e-16	46.08	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024473mg PE=4 SV=1	[more]
B9SUI5_RICCO	3.6e-15	40.20	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0573340 PE=4 SV=1	[more]

BLAST of Cp4.1LG04g01520 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16295.1	2.0e-09	36.17	S-protein homologue 1	[more]
AT5G38440.1	2.6e-09	38.54	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	3.4e-09	32.41	Plant self-incompatibility protein S1 family	[more]
AT2G23148.1	3.4e-09	38.46	Plant self-incompatibility protein S1 family	[more]
AT4G29035.1	1.7e-08	35.48	Plant self-incompatibility protein S1 family	[more]

BLAST of Cp4.1LG04g01520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700194417\|gb\|KGN49594.1\|	2.0e-43	62.32	hypothetical protein Csa_5G016040 [Cucumis sativus]	[more]
gi\|659134192\|ref\|XP_008467075.1\|	8.4e-42	60.29	PREDICTED: uncharacterized protein LOC103504513, partial [Cucumis melo]	[more]
gi\|659105271\|ref\|XP_008453055.1\|	9.6e-38	54.20	PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]	[more]
gi\|700196255\|gb\|KGN51432.1\|	8.4e-34	49.69	hypothetical protein Csa_5G538550 [Cucumis sativus]	[more]
gi\|700194418\|gb\|KGN49595.1\|	7.4e-30	52.67	hypothetical protein Csa_5G017790 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010264	Self-incomp_S1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g01520.1	Cp4.1LG04g01520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 60..158 score: 1.8
None	No IPR available	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 49..165 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g01520	Cucumber (Chinese Long) v3	cpecucB0838
Cp4.1LG04g01520	Cucumber (Chinese Long) v3	cpecucB0853
Cp4.1LG04g01520	Wax gourd	cpewgoB0825
Cp4.1LG04g01520	Wax gourd	cpewgoB0832
Cp4.1LG04g01520	Cucurbita pepo (Zucchini)	cpecpeB221
Cp4.1LG04g01520	Cucurbita pepo (Zucchini)	cpecpeB475
Cp4.1LG04g01520	Cucumber (Gy14) v1	cgycpeB0762
Cp4.1LG04g01520	Cucumber (Gy14) v1	cgycpeB0893
Cp4.1LG04g01520	Cucurbita maxima (Rimu)	cmacpeB147
Cp4.1LG04g01520	Cucurbita maxima (Rimu)	cmacpeB287
Cp4.1LG04g01520	Cucurbita moschata (Rifu)	cmocpeB127
Cp4.1LG04g01520	Cucurbita moschata (Rifu)	cmocpeB249
Cp4.1LG04g01520	Wild cucumber (PI 183967)	cpecpiB673
Cp4.1LG04g01520	Wild cucumber (PI 183967)	cpecpiB685
Cp4.1LG04g01520	Cucumber (Chinese Long) v2	cpecuB670
Cp4.1LG04g01520	Cucumber (Chinese Long) v2	cpecuB681
Cp4.1LG04g01520	Bottle gourd (USVL1VR-Ls)	cpelsiB547
Cp4.1LG04g01520	Watermelon (Charleston Gray)	cpewcgB585
Cp4.1LG04g01520	Watermelon (Charleston Gray)	cpewcgB612
Cp4.1LG04g01520	Watermelon (97103) v1	cpewmB641
Cp4.1LG04g01520	Watermelon (97103) v1	cpewmB654
Cp4.1LG04g01520	Melon (DHL92) v3.5.1	cpemeB597
Cp4.1LG04g01520	Melon (DHL92) v3.5.1	cpemeB631
Cp4.1LG04g01520	Cucumber (Gy14) v2	cgybcpeB415
Cp4.1LG04g01520	Cucumber (Gy14) v2	cgybcpeB683
Cp4.1LG04g01520	Cucumber (Gy14) v2	cgybcpeB684
Cp4.1LG04g01520	Melon (DHL92) v3.6.1	cpemedB704
Cp4.1LG04g01520	Melon (DHL92) v3.6.1	cpemedB753
Cp4.1LG04g01520	Silver-seed gourd	carcpeB0302
Cp4.1LG04g01520	Silver-seed gourd	carcpeB0380
Cp4.1LG04g01520	Silver-seed gourd	carcpeB0615