Cp4.1LG00g09540 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATCTTTTTCAACTTTTTATGAAGACTACTTCTCCAGCTCCGAGAGTAGTACTTGCCGGCGGTCCATATTTTCCGACAAGGAGCTTATGTTAGCGGCGAGCAATCCCAAGAAGAGGGCCGGTAGGAAGAAGTTTAAGGAGACAAGGCACCCTGTTTACAGAGGCGTCAGGAGGAGGAACTCCGGCAAGTGGGTCTGTGAAGTGAGAGAGCCTAATAAAAAGTCAAGGATCTGGCTTGGCACTTTTCCGACGGCGGAGATGGCGGCTCGGGCTCACGATGTCGCTGCCATGAAGCTTCGAGGTCGCTCTGCTTGTCTCAATTTTGCCGATTCTGCGTGGCGGCTGCCGGAGCCGGCATCTGCTGACGCCAGGGATATTCAGAAGGCGGCGGCGGAGGCGGCGGAGGCATTCCGGCCTGCAGAATCAGATGGGTCTTCTGTTGATGACTCAAGGACGGAAAATATGATGACGGCGGAGACGACGCCAGAAAACGTGTTGTACGTGGATGATGATGCAATTTTTGGGCTGCCGGGATTGTTGGAGGATATGGCTGCAGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGACGTGTCATTATGGAGCTACTAA ATGGAATCTTTTTCAACTTTTTATGAAGACTACTTCTCCAGCTCCGAGAGTAGTACTTGCCGGCGGTCCATATTTTCCGACAAGGAGCTTATGGATATTCAGAAGGCGGCGGCGGAGGCGGCGGAGGCATTCCGGCCTGCAGAATCAGATGGGTCTTCTGTTGATGACTCAAGGACGGAAAATATGATGACGGCGGAGACGACGCCAGAAAACGTGTTGTACGTGGATGATGATGCAATTTTTGGGCTGCCGGGATTGTTGGAGGATATGGCTGCAGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGACGTGTCATTATGGAGCTACTAA ATGGAATCTTTTTCAACTTTTTATGAAGACTACTTCTCCAGCTCCGAGAGTAGTACTTGCCGGCGGTCCATATTTTCCGACAAGGAGCTTATGGATATTCAGAAGGCGGCGGCGGAGGCGGCGGAGGCATTCCGGCCTGCAGAATCAGATGGGTCTTCTGTTGATGACTCAAGGACGGAAAATATGATGACGGCGGAGACGACGCCAGAAAACGTGTTGTACGTGGATGATGATGCAATTTTTGGGCTGCCGGGATTGTTGGAGGATATGGCTGCAGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGACGTGTCATTATGGAGCTACTAA MESFSTFYEDYFSSSESSTCRRSIFSDKELMDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
BLAST of Cp4.1LG00g09540 vs. Swiss-Prot
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. Swiss-Prot
Match: DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DREB1A PE=1 SV=2) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-09 Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. Swiss-Prot
Match: DRE1D_ARATH (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DREB1D PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-09 Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. Swiss-Prot
Match: DRE1F_ORYSI (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica GN=DREB1F PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 6.1e-07 Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. Swiss-Prot
Match: DRE1F_ORYSJ (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonica GN=DREB1F PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 6.1e-07 Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. TrEMBL
Match: A0A140DCV6_CUCME (CRT/DRE-binding factor 1 OS=Cucumis melo PE=2 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 4.4e-36 Identity = 80/101 (79.21%), Postives = 88/101 (87.13%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. TrEMBL
Match: A0A0A0L9N0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180260 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 4.8e-35 Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. TrEMBL
Match: A0A077B3Y3_9ROSI (C-repeat binding factor 4 OS=Vitis cinerea GN=CBF4 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.5e-17 Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. TrEMBL
Match: A0A077B3X0_9ROSI (C-repeat binding factor 4 OS=Vitis palmata GN=CBF4 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.3e-16 Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. TrEMBL
Match: A0A077AZV1_9ROSI (C-repeat binding factor 4 OS=Vitis rubra GN=CBF4 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.3e-16 Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. TAIR10
Match: AT4G25490.1 (AT4G25490.1 C-repeat/DRE binding factor 1) HSP 1 Score: 67.4 bits (163), Expect = 6.7e-12 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. TAIR10
Match: AT4G25480.1 (AT4G25480.1 dehydration response element B1A) HSP 1 Score: 63.5 bits (153), Expect = 9.7e-11 Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. TAIR10
Match: AT5G51990.1 (AT5G51990.1 C-repeat-binding factor 4) HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10 Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. NCBI nr
Match: gi|659077354|ref|XP_008439162.1| (PREDICTED: dehydration-responsive element-binding protein 1A [Cucumis melo]) HSP 1 Score: 158.7 bits (400), Expect = 6.3e-36 Identity = 80/101 (79.21%), Postives = 88/101 (87.13%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. NCBI nr
Match: gi|449446069|ref|XP_004140794.1| (PREDICTED: dehydration-responsive element-binding protein 1A [Cucumis sativus]) HSP 1 Score: 155.2 bits (391), Expect = 6.9e-35 Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. NCBI nr
Match: gi|720072883|ref|XP_010278524.1| (PREDICTED: dehydration-responsive element-binding protein 1D-like [Nelumbo nucifera]) HSP 1 Score: 96.7 bits (239), Expect = 2.9e-17 Identity = 54/89 (60.67%), Postives = 67/89 (75.28%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. NCBI nr
Match: gi|674268569|gb|AIL00808.1| (C-repeat binding factor 4 [Vitis cinerea]) HSP 1 Score: 95.9 bits (237), Expect = 5.0e-17 Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 1
BLAST of Cp4.1LG00g09540 vs. NCBI nr
Match: gi|674268527|gb|AIL00787.1| (C-repeat binding factor 4 [Vitis rubra]) HSP 1 Score: 93.2 bits (230), Expect = 3.2e-16 Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|