Lsi01G011210 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTTAGAAGATGGGAAAGAGGGGCCCACTCAACAATTTCATCGTCTTTAAGATTCCCTTCAAGCCCCGTCTCCCAAACTTTGTTTTCAGCATTCCGAACATTAGCCACAGTAGCATTAGATCGATTGGAGAGTCTATACAGCTTCTAGGATACAAGGTGGGAAATTCTGCATCACTGACCCAAACATCATGAAAAAAAGAAGTGTGAATATGATTGCCCAAACATCTGCTAATGTAGGTTGTAACTATACCATAGCATTGAAATGGATCTCCATGGAGCTTTTGCAGATTCTAAATTGGAAGATATTGCCAATGTTGGATAGCTGCTATTGAGTACTTTGCGTTAAGGATATTCCATCTAAGAGCACCATCTTCACAGAGGAATCTCCATATCCATTTAGATAAAAGAGCGTCATTTCGATACTTGAGATTGCCAATAAAATAACTAACCCACCCAATTGAAGAGGAAGTTGAATTTTTGCCTAATTCACATTGTGCGGCATCTTCCCAAAGAAAATTCCTAATGATCTTTTCAATTGTTTTTGCAATCTTGGTAGACATTTTGAATAAGGATAAATAATACATAGACATATTAGAAAGGGTAGATTGGATGATTGTTTGCCTACCCTCCTTTGGATATGAAAGAAAACTTCCAATTACGAAATCTATGTTGGATTTTCTCCACAATTGATGTCCTGAGTCCTGAATAAGATTGGCTCAGTTTTTAGTTAAAAATGAAGGGCAGTCAATGGGTCGGTATTTCTCTCGGAAGTTTGAACCATGGGATGAAAAGCTGCAGGGAAAGTGAAAGTCCCCCCCGCATGGAGGGTGGTTTTAAATGTCGCGGTTTCCTTTGAGTCAATAGAGTAATATTGAGTCAAACCATTGTGTTCTTCATGACATTTTCATTAATTCTTTGTATTCTTCATTTTCAATGTTATGTTAAAAATAATTACAAATAAATTAATGTCATACACATCCCTGATCCCACACTAACTAAAGTATAGTTGCACTAAAACTAAATTAGCTTTGATTGTAGAAAGATTTTCATTAAGTTCAATTGTTTTGCTAAAATGATTCCCAAAAAAAAATGTTTTACTAGTTTATTTTCTTTATAATTAAATATGTAATTTATAACGGAAAACTAAGTTAATATGGAATTAATTGGCATAGAAAATAAACTAAACTTGGAGTGGACTGTAGTACATTCAGGGTATTATCTTTGTTCCCAAGAAATATATATATTTATGAGATTGTATGTATTCATAATAATGAGATTGTATGTATTCATAATACATTGTAGTGCGGAAAGTTCTTTTATTTTAAAATAATATATATCTATAAAGCATCGTTGTCTAAATACTCATGTTCAACAGTACAAGTACGACAAGATGGACATTAAGGCGATGGTGATGGTTCTAATATATAAATGTTTACAGATACTTCTTTCCTTTTCACAGGTGACAAGTGTGAGTTACCACCCGAAAGATAAATGTATGATAACTGCCTCGGTAGATGGGATGATTCGGGTTTGGAAGACATGAGAGCCAAGAGGAGGAAGAACATGAATTTCCTCAGCTTAATAATGCACATTATGCTCTGAGGTATTTAATTCTTCACTTCTTGATACAGTTTATTGCAGTTATTCCAATCTTGAATTATTAGAGTTTGAAACTTGTGGCTTTTAAGAATCATGATAATGCTGGTGGTGTTTAATTTATCAGTCAATATCAAATTGACATAGACTGGTTGATCCTGGTCCAACAATAAGAATCCTTGCCAGTACAATAATTCATAATTTTGGGTCTTTAACTTAATGAAGTTACTTGATAAAGTTGAACAACTTGATTGAAAAAGTTGTTTTTTTAATTGCTTTGGGTCTCAAACTTGAATTTTGTTTACCGTACAAGTCTTAGCTGTACAAGATCAGCTAGGCTTTGATATCAAGATATTTTAAATGTGTTTAAAGGCTAGATTTATAACAACTTCAACCCCCTAATTTATTGTTCCACCCTTTACCGACACAGTCCCGTCGTGTGCACTGCATTGTATAGAGTTTTCCCCTGGTGAATCACAAATCATTTCAAACCATTTGGTGTTGAAAGTTCAACCTCAAAGCTGATAATTTCAAGTGAATTAGTTGAATCTCTGTTTTCCATTCTCTAAAATTTCATGTGTAGATTTCTTGATTTAAAACAAAGGAAAGTTATAGCTTTGGCATTTACATTGATCTCTTATATGCTTTGTTTCAGGTTCTGCAGAATGCCAAACATAATATCTGAATGGTTTTTGACTGATCTAAAGCCTCTCTAACTTTGTCCTTGAGTTTCAACTAAGATCATAAAGTTGTTTGTTGACTATTCCAATTCCAAACTCGATTATGAAACCGTAATTTGTAAATTAAACGACGTTGTATGACGTTAATTCGATGTTCATTCATTGACCCTTAGAATTGAAGTTTTTATTCATTTTTATCAGTCTCTGAATCAACAATCAGATCATCTGGTAAAGAATTGAGAAAGAGGCAATAAGCTATGGTAAGACAATTTGTTTCTCCTCAAAATCAAAGAGAGTGCAGAAACATATTGATTACAAAGGCAAAACAAGGTTGATACCTTAAATTTGGTGTACCAAATTTACAAGAATGAAGTGGCAATTGGCTTACACTGACAAAAGTAAATGAAGATTGTCTAGAACACAAGTCAGTAGTTGGACCTGCCTTCCAAATTCAATAAATTTCCATCATAATTTCACTTTGAAATTTCCTTCTTCA ATGGATATTCCCTTCAAGCCCCGTCTCCCAAACTTTGTTTTCAGCATTCCGAACATTAGCCACAGTAGCATTAGATCGATTGGAGAGTCTATACAGCTTCTAGGATACAAGCATCGTTGTCTAAATACTCATGTTCAACAGTACAAGTACGACAAGATGGACATTAAGGCGATGGTGACAAGTGTGAGTTACCACCCGAAAGATAAATGTATGATAACTGCCTCGGTAGATGGGATGATTCGGGTTTGGAAGACATGAGAGCCAAGAGGAGGAAGAACATGAATTTCCTCAGCTTAATAATGCACATTATGCTCTGAGGTTCTGCAGAATGCCAAACATAATATCTGAATGGTTTTTGACTGATCTAAAGCCTCTCTAACTTTGTCCTTGAGTTTCAACTAAGATCATAAAGTTGTTTGTTGACTATTCCAATTCCAAACTCGATTATGAAACCGTAATTTGTAAATTAAACGACGTTGTATGACGTTAATTCGATGTTCATTCATTGACCCTTAGAATTGAAGTTTTTATTCATTTTTATCAGTCTCTGAATCAACAATCAGATCATCTGGTAAAGAATTGAGAAAGAGGCAATAAGCTATGGTAAGACAATTTGTTTCTCCTCAAAATCAAAGAGAGTGCAGAAACATATTGATTACAAAGGCAAAACAAGGTTGATACCTTAAATTTGGTGTACCAAATTTACAAGAATGAAGTGGCAATTGGCTTACACTGACAAAAGTAAATGAAGATTGTCTAGAACACAAGTCAGTAGTTGGACCTGCCTTCCAAATTCAATAAATTTCCATCATAATTTCACTTTGAAATTTCCTTCTTCA ATGGATATTCCCTTCAAGCCCCGTCTCCCAAACTTTGTTTTCAGCATTCCGAACATTAGCCACAGTAGCATTAGATCGATTGGAGAGTCTATACAGCTTCTAGGATACAAGCATCGTTGTCTAAATACTCATGTTCAACAGTACAAGTACGACAAGATGGACATTAAGGCGATGGTGACAAGTGTGAGTTACCACCCGAAAGATAAATGTATGATAACTGCCTCGGTAGATGGGATGATTCGGGTTTGGAAGACATGA MDIPFKPRLPNFVFSIPNISHSSIRSIGESIQLLGYKHRCLNTHVQQYKYDKMDIKAMVTSVSYHPKDKCMITASVDGMIRVWKT
BLAST of Lsi01G011210 vs. TrEMBL
Match: A0A0A0KFA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486680 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.6e-06 Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 1
BLAST of Lsi01G011210 vs. TAIR10
Match: AT5G64730.1 (AT5G64730.1 Transducin/WD40 repeat-like superfamily protein) HSP 1 Score: 50.8 bits (120), Expect = 4.7e-07 Identity = 21/27 (77.78%), Postives = 25/27 (92.59%), Query Frame = 1
BLAST of Lsi01G011210 vs. NCBI nr
Match: gi|659080817|ref|XP_008440996.1| (PREDICTED: WD repeat domain-containing protein 83 [Cucumis melo]) HSP 1 Score: 59.3 bits (142), Expect = 3.8e-06 Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 1
BLAST of Lsi01G011210 vs. NCBI nr
Match: gi|449448452|ref|XP_004141980.1| (PREDICTED: WD repeat domain-containing protein 83 [Cucumis sativus]) HSP 1 Score: 59.3 bits (142), Expect = 3.8e-06 Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |