Lsi01G018690 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G018690
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	DTW domain protein
Location	chr01 : 20746045 .. 20746800 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCAACAACCAACTTCAACTCCGCCGCTGGAAATTCCTCGCCGTCATCCTCACCGCCACCTCGGCGGTCAATTTGCCCTAATTGCAGCCGTCCCCAACCAGTCTGCCTCTGCAAATTCCTTCCATCTCCACCAATCGCAACCAAAACAAAAATCATCATTCTCCAACATCCTCACGAGGCACAACACAAGCTCTCCACCACACCAATCCTCACCAAATGCCTCCTCAATGCAACCACCATCGTCAATCGCCGCCTCAAGCCCGGCCTCTCCGAAATCCTTGACCGATCGCCTCCCGCCGTCTTCCTCTTCCCGCCTACACCTCACTCCTCGCCGCCAATCAACATCTCGGAACTTAACCTAACTACCGATCTGGTCCTGATTGCGTTCGACGGAACGTGGAAGCACGCGAAGGAGATGGTGCGATCGAGCGAGGAGTTTTTATCGAGATTCGCGAGGAGAGTTTGCTTGGAATTCGACGAGAGTGTTGAAGGCGGAAGCATATTTGATTCGGAGTTGATTCTGAGGAAGGAGCCCCACGGCGGCTGCGTTAGCACGATGGAGGCGGTGGCGAGGTGTTTGAGAGTGATGGAATCAGATGGGGCGGAGATTGAGAAGAAATTGATTGGAGTTTTGAGGGAGATGGTTAGATTACAGGCTGGGTTTTTGAAGCCCATGAACCCTAGGCCCAAATTGCTCAAGATCAAGAACATGAAGAAGAAGAAGAAGAATGAGAGGGAGGATGAAAATTAA

mRNA sequence

ATGGAGGCAACAACCAACTTCAACTCCGCCGCTGGAAATTCCTCGCCGTCATCCTCACCGCCACCTCGGCGGTCAATTTGCCCTAATTGCAGCCGTCCCCAACCAGTCTGCCTCTGCAAATTCCTTCCATCTCCACCAATCGCAACCAAAACAAAAATCATCATTCTCCAACATCCTCACGAGGCACAACACAAGCTCTCCACCACACCAATCCTCACCAAATGCCTCCTCAATGCAACCACCATCGTCAATCGCCGCCTCAAGCCCGGCCTCTCCGAAATCCTTGACCGATCGCCTCCCGCCGTCTTCCTCTTCCCGCCTACACCTCACTCCTCGCCGCCAATCAACATCTCGGAACTTAACCTAACTACCGATCTGGTCCTGATTGCGTTCGACGGAACGTGGAAGCACGCGAAGGAGATGGTGCGATCGAGCGAGGAGTTTTTATCGAGATTCGCGAGGAGAGTTTGCTTGGAATTCGACGAGAGTGTTGAAGGCGGAAGCATATTTGATTCGGAGTTGATTCTGAGGAAGGAGCCCCACGGCGGCTGCGTTAGCACGATGGAGGCGGTGGCGAGGTGTTTGAGAGTGATGGAATCAGATGGGGCGGAGATTGAGAAGAAATTGATTGGAGTTTTGAGGGAGATGGTTAGATTACAGGCTGGGTTTTTGAAGCCCATGAACCCTAGGCCCAAATTGCTCAAGATCAAGAACATGAAGAAGAAGAAGAAGAATGAGAGGGAGGATGAAAATTAA

Coding sequence (CDS)

ATGGAGGCAACAACCAACTTCAACTCCGCCGCTGGAAATTCCTCGCCGTCATCCTCACCGCCACCTCGGCGGTCAATTTGCCCTAATTGCAGCCGTCCCCAACCAGTCTGCCTCTGCAAATTCCTTCCATCTCCACCAATCGCAACCAAAACAAAAATCATCATTCTCCAACATCCTCACGAGGCACAACACAAGCTCTCCACCACACCAATCCTCACCAAATGCCTCCTCAATGCAACCACCATCGTCAATCGCCGCCTCAAGCCCGGCCTCTCCGAAATCCTTGACCGATCGCCTCCCGCCGTCTTCCTCTTCCCGCCTACACCTCACTCCTCGCCGCCAATCAACATCTCGGAACTTAACCTAACTACCGATCTGGTCCTGATTGCGTTCGACGGAACGTGGAAGCACGCGAAGGAGATGGTGCGATCGAGCGAGGAGTTTTTATCGAGATTCGCGAGGAGAGTTTGCTTGGAATTCGACGAGAGTGTTGAAGGCGGAAGCATATTTGATTCGGAGTTGATTCTGAGGAAGGAGCCCCACGGCGGCTGCGTTAGCACGATGGAGGCGGTGGCGAGGTGTTTGAGAGTGATGGAATCAGATGGGGCGGAGATTGAGAAGAAATTGATTGGAGTTTTGAGGGAGATGGTTAGATTACAGGCTGGGTTTTTGAAGCCCATGAACCCTAGGCCCAAATTGCTCAAGATCAAGAACATGAAGAAGAAGAAGAAGAATGAGAGGGAGGATGAAAATTAA

Protein sequence

MEATTNFNSAAGNSSPSSSPPPRRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPHEAQHKLSTTPILTKCLLNATTIVNRRLKPGLSEILDRSPPAVFLFPPTPHSSPPINISELNLTTDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSELILRKEPHGGCVSTMEAVARCLRVMESDGAEIEKKLIGVLREMVRLQAGFLKPMNPRPKLLKIKNMKKKKKNEREDEN

Homology

[Close]

BLAST of Lsi01G018690 vs. Swiss-Prot
Match: DTWD2_MACFA (DTW domain-containing protein 2 OS=Macaca fascicularis GN=DTWD2 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-14
Identity = 73/245 (29.80%), Postives = 112/245 (45.71%), Query Frame = 1


Query: 20  PPPRRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPHEAQHKLSTTPILTKCLL-- 79
           P  RR  C  CSRPQ VCLC FLP+ P+   T + I+QHP E    L T P+L  CL   
Sbjct: 62  PAKRRPECSRCSRPQKVCLCPFLPAHPLHISTHLYIIQHPAEENKVLRTVPLLAACLPQD 121

Query: 80  NATTIVNRRLK----PGLSEILDRSPPAVFLFPPTPHSSPPINISELNLTTDL---VLIA 139
                + RR      P LS +  R    + L+P     +   N+ E  L + +    +I 
Sbjct: 122 KCKVKIGRRFSEERDPELSTVC-RKSGTLILYP----GAEAANLEEFILDSPVYPSTIII 181

Query: 140 FDGTWKHAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSELILRKEPHGGCVSTMEA 199
            DGTW  AK++          F +       + V+  +   S+ ++R +P   C+ST+E 
Sbjct: 182 IDGTWSQAKDI----------FYKNSLFRHPKQVQLKTSISSQYVIRMQPTNRCLSTLEC 241

Query: 200 VARCLRVMESDGAEIEKKLIGVLREM--VRLQAGFLKPMNPRPKL---LKIKNMKKKKKN 251
            A  L ++E +   I++ L+  L+ +   +LQ G    ++    L   L  K M K K+ 
Sbjct: 242 AAVALSILEKNN-YIQETLLRPLQALCSFQLQHGAQIRLSKEHLLKNGLYTKPMPKNKRK 290

[Close]

BLAST of Lsi01G018690 vs. Swiss-Prot
Match: DTWD2_HUMAN (DTW domain-containing protein 2 OS=Homo sapiens GN=DTWD2 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.0e-14
Identity = 76/263 (28.90%), Postives = 116/263 (44.11%), Query Frame = 1


Query: 3   ATTNFNSAAGNSSPSSSPPPRRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPHEA 62
           A  + +SA G       P  RR  C  CSRPQ VCLC FLP+ P+   T + I+QHP E 
Sbjct: 45  AEADDDSADGLWELPVEPAERRPECTRCSRPQKVCLCPFLPAHPLHISTHLYIIQHPAEE 104

Query: 63  QHKLSTTPILTKCLL--NATTIVNRRLK----PGLSEILDRSPPAVFLFPPTPHSSPPIN 122
              L T P+L  CL        + RR      P LS +  R    + L+P     +   N
Sbjct: 105 NKVLRTVPLLAACLPQDKCKVKIGRRFSEERDPELSTVC-RKSGTLILYP----GAEAAN 164

Query: 123 ISELNLTTDL---VLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSE 182
           + E  L + +    +I  DGTW  AK++          F +       + V+  +   S+
Sbjct: 165 LEEFILDSPVYPSTIIIIDGTWSQAKDI----------FYKNSLFRHPKQVQLKTSISSQ 224

Query: 183 LILRKEPHGGCVSTMEAVARCLRVMESDGAEIEKKLIGVLREM----------VRLQAGF 242
            ++R +P   C+ST+E  A  L ++E +   I++ L+  L+ +          +RL    
Sbjct: 225 YVIRMQPTNRCLSTLECAAVALSILEKNN-YIQETLLRPLQALCSFQLQHGAQIRLSKEH 284

Query: 243 LKPMNPRPKLLKIKNMKKKKKNE 247
           L      PK +  KN +K +K E
Sbjct: 285 LLKNGLYPKPMP-KNKRKLRKME 290

[Close]

BLAST of Lsi01G018690 vs. TrEMBL
Match: A0A0A0KW36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G165850 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 4.7e-112
Identity = 214/251 (85.26%), Postives = 229/251 (91.24%), Query Frame = 1


Query: 1   MEATTNFNSAAGNSSPSSSPPPRRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPH 60
           ME+  N + AAG SS  SS PPRRSIC NC+RPQPVCLCKFLPSPPIATKTKIIILQHPH
Sbjct: 1   MESRNNHDLAAGYSS--SSTPPRRSICSNCNRPQPVCLCKFLPSPPIATKTKIIILQHPH 60

Query: 61  EAQHKLSTTPILTKCLLNATTIVNRRLKPGLSEILDRSPPAVFLFPPTPHSSPPINISEL 120
           E+QHKLSTTPILTKCLLNATTIVNRRLKPGLS++LD+SP AVFLFPPTPHSSPPINIS+L
Sbjct: 61  ESQHKLSTTPILTKCLLNATTIVNRRLKPGLSKLLDQSPHAVFLFPPTPHSSPPINISDL 120

Query: 121 NLTTDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSELILRKEP 180
           N+T DLVLIAFDGTWKHAKEMVRSSEE+LSRFARRVCL+ DESVEGGSIFDSELILRKEP
Sbjct: 121 NITEDLVLIAFDGTWKHAKEMVRSSEEYLSRFARRVCLDIDESVEGGSIFDSELILRKEP 180

Query: 181 HGGCVSTMEAVARCLRVMESDGAEIEKKLIGVLREMVRLQAGFLKPMNPRPKLLKIKNMK 240
           HGGCVSTMEAVARCLRVME DGA +E+KLIGVLREMVRLQAGFLKPMNPRPKLLK     
Sbjct: 181 HGGCVSTMEAVARCLRVMELDGAAVEEKLIGVLREMVRLQAGFLKPMNPRPKLLK---SL 240

Query: 241 KKKKNEREDEN 252
           KK+ +  EDEN
Sbjct: 241 KKQTSVTEDEN 246

[Close]

BLAST of Lsi01G018690 vs. TrEMBL
Match: W9QQG3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009343 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 5.2e-79
Identity = 156/234 (66.67%), Postives = 188/234 (80.34%), Query Frame = 1


Query: 18  SSPPPRRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPHEAQHKLSTTPILTKCLL 77
           S+   RR ICPNCSRP PVCLC  LP+ PI T T+II+L HPHE QHKLSTTPILTKCL 
Sbjct: 25  STTSRRRPICPNCSRPSPVCLCHALPAQPIPTTTQIIVLHHPHEVQHKLSTTPILTKCLS 84

Query: 78  NATTIVNRRLKPGLSEILDRSPPAVFLFPPTPHSSPPINISEL-NLTTDLVLIAFDGTWK 137
           NAT +V RRL+ GLS +LD+SPPA++LFP TP+SSP I +S+L +     VLIAFD TWK
Sbjct: 85  NATAVVGRRLRHGLSPLLDQSPPAIYLFPSTPNSSPAITLSQLRHRRPPSVLIAFDATWK 144

Query: 138 HAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSELILRKEPHGGCVSTMEAVARCLR 197
           HA+EMVR+SE+FL  FA+RVCLE DESV+GG+IFDSELILRKEP GGCV+TMEAVAR L 
Sbjct: 145 HAREMVRASEDFLWGFAQRVCLEVDESVKGGTIFDSELILRKEPFGGCVTTMEAVARTLG 204

Query: 198 VMESDGAEIEKKLIGVLREMVRLQAGFLKPMNPRPKLLKIKNMKKKKKNEREDE 251
           V+E +G +IE +L+G+LREMVRLQAG+L+P+ PRPKL+K K   +K     EDE
Sbjct: 205 VIEPNGPDIEDRLVGLLREMVRLQAGYLRPVMPRPKLVKKKGKGEKVVVVEEDE 258

[Close]

BLAST of Lsi01G018690 vs. TrEMBL
Match: A0A0L9U7H5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g215000 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 6.8e-79
Identity = 156/228 (68.42%), Postives = 185/228 (81.14%), Query Frame = 1


Query: 18  SSPPPRRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPHEAQHKLSTTPILTKCLL 77
           S  P RRSIC NC RP  VCLC  LP PPI T T+I+I+QHPHEA+HKLSTTPIL K LL
Sbjct: 14  SPEPQRRSICSNCDRPTRVCLCHALPFPPIQTATRILIVQHPHEARHKLSTTPILNKSLL 73

Query: 78  NATTIVNRRLKPGLSEILDRSPPAVFLFPPTPHSSPP-INISELNLTTDLVLIAFDGTWK 137
            A+++ +RRL+ GLS ILDRSPPA++LFP +  S+ P ++IS +  + DLVLIAFD TW+
Sbjct: 74  RASSVTSRRLRRGLSPILDRSPPALYLFPSSASSTTPALHISAVRPSADLVLIAFDATWQ 133

Query: 138 HAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSELILRKEPHGGCVSTMEAVARCLR 197
           HA+EMVR+SE FLS FA RVCL+ DES+ GGSI+DSELILRKEP  GCVSTMEAVAR LR
Sbjct: 134 HAREMVRASENFLSEFATRVCLDVDESIGGGSIYDSELILRKEPFAGCVSTMEAVARALR 193

Query: 198 VMESDGAEIEKKLIGVLREMVRLQAGFLKPMNPRPKLLKIKNMKKKKK 245
           V+E +G EIE+KL+GVLREMVRLQAGFLKP+ PRPKLLK K   K+KK
Sbjct: 194 VLEPNGPEIEEKLVGVLREMVRLQAGFLKPVKPRPKLLKKKAEGKEKK 241

[Close]

BLAST of Lsi01G018690 vs. TrEMBL
Match: A0A0S3RXC5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G278000 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 6.8e-79
Identity = 156/228 (68.42%), Postives = 185/228 (81.14%), Query Frame = 1


Query: 18  SSPPPRRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPHEAQHKLSTTPILTKCLL 77
           S  P RRSIC NC RP  VCLC  LP PPI T T+I+I+QHPHEA+HKLSTTPIL K LL
Sbjct: 14  SPEPQRRSICSNCDRPTRVCLCHALPFPPIQTATRILIVQHPHEARHKLSTTPILNKSLL 73

Query: 78  NATTIVNRRLKPGLSEILDRSPPAVFLFPPTPHSSPP-INISELNLTTDLVLIAFDGTWK 137
            A+++ +RRL+ GLS ILDRSPPA++LFP +  S+ P ++IS +  + DLVLIAFD TW+
Sbjct: 74  RASSVTSRRLRRGLSPILDRSPPALYLFPSSASSTTPALHISAVRPSADLVLIAFDATWQ 133

Query: 138 HAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSELILRKEPHGGCVSTMEAVARCLR 197
           HA+EMVR+SE FLS FA RVCL+ DES+ GGSI+DSELILRKEP  GCVSTMEAVAR LR
Sbjct: 134 HAREMVRASENFLSEFATRVCLDVDESIGGGSIYDSELILRKEPFAGCVSTMEAVARALR 193

Query: 198 VMESDGAEIEKKLIGVLREMVRLQAGFLKPMNPRPKLLKIKNMKKKKK 245
           V+E +G EIE+KL+GVLREMVRLQAGFLKP+ PRPKLLK K   K+KK
Sbjct: 194 VLEPNGPEIEEKLVGVLREMVRLQAGFLKPVKPRPKLLKKKAEGKEKK 241

[Close]

BLAST of Lsi01G018690 vs. TrEMBL
Match: V7CY43_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G131900g PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.9e-77
Identity = 156/232 (67.24%), Postives = 186/232 (80.17%), Query Frame = 1


Query: 19  SPPPR-RSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPHEAQHKLSTTPILTKCLL 78
           SP PR RSIC NC RP  VCLC  LP PPI T T+I+I+QHPHEA+HKLSTTPIL K LL
Sbjct: 11  SPEPRHRSICTNCDRPTRVCLCHALPLPPIQTATRILIVQHPHEARHKLSTTPILNKSLL 70

Query: 79  NATTIVNRRLKPGLSEILDRSPPAVFLFPPTPHSSPP-INISELNLTTDLVLIAFDGTWK 138
            A+++ +RRL+ GLS ILDRSPPA++LFP +  S+ P ++IS +  + DLVLI FD TW+
Sbjct: 71  RASSVTSRRLRRGLSPILDRSPPALYLFPSSASSTTPALHISAVRPSADLVLIVFDATWQ 130

Query: 139 HAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSELILRKEPHGGCVSTMEAVARCLR 198
           HA+EMVR+SE FLS FA RVCL  DESV GGSI+DSELILRKEP  GCVSTMEAVAR LR
Sbjct: 131 HAREMVRASEGFLSEFATRVCLGVDESVGGGSIYDSELILRKEPFAGCVSTMEAVARALR 190

Query: 199 VMESDGAEIEKKLIGVLREMVRLQAGFLKPMNPRPKLLKIKNMKKKKKNERE 249
           V+E +G EIE+KL+GVLREMVRLQAGF+KP+ PRPKLLK K  +K+K+   E
Sbjct: 191 VLEPNGPEIEEKLVGVLREMVRLQAGFVKPVKPRPKLLKKKAEEKEKREGSE 242

[Close]

BLAST of Lsi01G018690 vs. TAIR10
Match: AT2G41750.1 (AT2G41750.1 DTW domain-containing protein)

HSP 1 Score: 229.6 bits (584), Expect = 2.2e-60
Identity = 138/246 (56.10%), Postives = 168/246 (68.29%), Query Frame = 1


Query: 23  RRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPHEAQHKLSTTPILTKCLLNATTI 82
           RR IC NC RP  +CLC  LP+  I T T+IIIL HPHE++HKL+TTP+LTK LLN T I
Sbjct: 10  RRQICDNCDRPNAICLCHVLPADLIPTNTEIIILHHPHESRHKLNTTPLLTKSLLNVTRI 69

Query: 83  VNRRL-KPGLSEILDRS---PPAVFLFPPTPHSSPPINISE---LNLTTD--------LV 142
             RRL +  +S     +   PP ++LFP +P SSP + ISE   LNL           L 
Sbjct: 70  PARRLLRRHISTAGGTALPAPPTIYLFPSSP-SSPAVTISEFKSLNLLNHREISNPPPLR 129

Query: 143 LIAFDGTWKHAKEMVRSSEEFLSRF-ARRVCL--EFDESVEGGSIFDSELILRKEPHGGC 202
           LI FD TWKHAKEMV++SE  L    A RVCL  E D SV GG+I+DSEL+LRKEP GGC
Sbjct: 130 LIVFDATWKHAKEMVKASEVVLREAGAVRVCLDTEIDASVSGGTIYDSELVLRKEPFGGC 189

Query: 203 VSTMEAVARCLRVMESDGAEIEKKLIGVLREMVRLQAGFLKPMNPRPKLLKIKNMKKKKK 251
           V+T EAVARCL  +E DG EIE+KLI VL+EMVR Q+ +LKPM PRPKLLK K  + ++ 
Sbjct: 190 VTTAEAVARCLGAIEPDGEEIERKLISVLKEMVRFQSKYLKPMKPRPKLLK-KRFQNQQP 249

[Close]

BLAST of Lsi01G018690 vs. NCBI nr
Match: gi|659121687|ref|XP_008460775.1| (PREDICTED: LOW QUALITY PROTEIN: DTW domain-containing protein 2 [Cucumis melo])

HSP 1 Score: 419.1 bits (1076), Expect = 5.5e-114
Identity = 217/251 (86.45%), Postives = 230/251 (91.63%), Query Frame = 1


Query: 1   MEATTNFNSAAGNSSPSSSPPPRRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPH 60
           ME+T N N AAG SS  SSPPPRR ICPNC+RPQPVCLCKFLPS PIATK KIIILQHPH
Sbjct: 23  MESTNNHNFAAGYSS--SSPPPRRPICPNCNRPQPVCLCKFLPSSPIATKXKIIILQHPH 82

Query: 61  EAQHKLSTTPILTKCLLNATTIVNRRLKPGLSEILDRSPPAVFLFPPTPHSSPPINISEL 120
           E+QHKLSTTPILTKCLLNATTIVNRRLKPGLS++LD+SPPAVFLFPPTPHSSPPINIS+L
Sbjct: 83  ESQHKLSTTPILTKCLLNATTIVNRRLKPGLSKLLDQSPPAVFLFPPTPHSSPPINISDL 142

Query: 121 NLTTDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSELILRKEP 180
           N+T DLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCL+ DESVEGGSIFDSELILRKEP
Sbjct: 143 NITEDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDIDESVEGGSIFDSELILRKEP 202

Query: 181 HGGCVSTMEAVARCLRVMESDGAEIEKKLIGVLREMVRLQAGFLKPMNPRPKLLKIKNMK 240
           HGGCVSTMEAVARCLRVME DGA +E+KLIGVLREMVRLQAGFLKPMNPRPKLLK     
Sbjct: 203 HGGCVSTMEAVARCLRVMELDGAAVEEKLIGVLREMVRLQAGFLKPMNPRPKLLK---NF 262

Query: 241 KKKKNEREDEN 252
           K+K +  EDEN
Sbjct: 263 KQKTSVMEDEN 268

[Close]

BLAST of Lsi01G018690 vs. NCBI nr
Match: gi|449463356|ref|XP_004149400.1| (PREDICTED: DTW domain-containing protein 2 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 6.7e-112
Identity = 214/251 (85.26%), Postives = 229/251 (91.24%), Query Frame = 1


Query: 1   MEATTNFNSAAGNSSPSSSPPPRRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPH 60
           ME+  N + AAG SS  SS PPRRSIC NC+RPQPVCLCKFLPSPPIATKTKIIILQHPH
Sbjct: 1   MESRNNHDLAAGYSS--SSTPPRRSICSNCNRPQPVCLCKFLPSPPIATKTKIIILQHPH 60

Query: 61  EAQHKLSTTPILTKCLLNATTIVNRRLKPGLSEILDRSPPAVFLFPPTPHSSPPINISEL 120
           E+QHKLSTTPILTKCLLNATTIVNRRLKPGLS++LD+SP AVFLFPPTPHSSPPINIS+L
Sbjct: 61  ESQHKLSTTPILTKCLLNATTIVNRRLKPGLSKLLDQSPHAVFLFPPTPHSSPPINISDL 120

Query: 121 NLTTDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSELILRKEP 180
           N+T DLVLIAFDGTWKHAKEMVRSSEE+LSRFARRVCL+ DESVEGGSIFDSELILRKEP
Sbjct: 121 NITEDLVLIAFDGTWKHAKEMVRSSEEYLSRFARRVCLDIDESVEGGSIFDSELILRKEP 180

Query: 181 HGGCVSTMEAVARCLRVMESDGAEIEKKLIGVLREMVRLQAGFLKPMNPRPKLLKIKNMK 240
           HGGCVSTMEAVARCLRVME DGA +E+KLIGVLREMVRLQAGFLKPMNPRPKLLK     
Sbjct: 181 HGGCVSTMEAVARCLRVMELDGAAVEEKLIGVLREMVRLQAGFLKPMNPRPKLLK---SL 240

Query: 241 KKKKNEREDEN 252
           KK+ +  EDEN
Sbjct: 241 KKQTSVTEDEN 246

[Close]

BLAST of Lsi01G018690 vs. NCBI nr
Match: gi|1009160068|ref|XP_015898156.1| (PREDICTED: DTW domain-containing protein 2 [Ziziphus jujuba])

HSP 1 Score: 334.7 bits (857), Expect = 1.4e-88
Identity = 169/242 (69.83%), Postives = 201/242 (83.06%), Query Frame = 1


Query: 13  NSSPSSSPPPRRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPHEAQHKLSTTPIL 72
           + + SSSPPPRR+IC NCSRP PVCLC+ LP+ PI TKT ++IL HPHEAQHKLSTTP+L
Sbjct: 12  SGTSSSSPPPRRTICGNCSRPSPVCLCESLPAQPIPTKTHVVILHHPHEAQHKLSTTPVL 71

Query: 73  TKCLLNATTIVNRRLKPGLSEILDRSPPAVFLFPPTPHSSPPINISELNLTTD---LVLI 132
           TKCLLN+TTIV+RRL+PGLS +LD+SPPA++LFPPT HSSP +N+S L +      LVL+
Sbjct: 72  TKCLLNSTTIVSRRLRPGLSPLLDQSPPAIYLFPPT-HSSPAVNLSCLQVQDPEKPLVLV 131

Query: 133 AFDGTWKHAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSELILRKEPHGGCVSTME 192
            FDGTWKHAKEMV +SEEFLS+FA+RVCL+FDE+V GGSI+DSELILRKEP GGCVSTME
Sbjct: 132 VFDGTWKHAKEMVSASEEFLSKFAKRVCLDFDETVSGGSIYDSELILRKEPFGGCVSTME 191

Query: 193 AVARCLRVMESDGAEIEKKLIGVLREMVRLQAGFLKPMNPRPKLLKIKNMKKKKKNERED 252
           AVAR LRVME +G EIE+KL+ VLR+MVRLQAG+LKPM  RPKLLK      KK N   +
Sbjct: 192 AVARALRVMEPNGLEIERKLVQVLRDMVRLQAGYLKPMKTRPKLLKKSKQPNKKLNHESE 251

[Close]

BLAST of Lsi01G018690 vs. NCBI nr
Match: gi|950950449|ref|XP_014495398.1| (PREDICTED: DTW domain-containing protein 2 [Vigna radiata var. radiata])

HSP 1 Score: 304.3 bits (778), Expect = 2.0e-79
Identity = 157/228 (68.86%), Postives = 187/228 (82.02%), Query Frame = 1


Query: 18  SSPPPRRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPHEAQHKLSTTPILTKCLL 77
           S  P RRSIC NC RP  VCLC  LP PPI T T+I+I+QHPHEA+HKLSTTPIL K LL
Sbjct: 14  SPEPQRRSICSNCDRPTRVCLCHALPFPPIQTATRILIVQHPHEARHKLSTTPILNKSLL 73

Query: 78  NATTIVNRRLKPGLSEILDRSPPAVFLFPPTPHSSPP-INISELNLTTDLVLIAFDGTWK 137
            A+++ +RRL+ GLS ILDRSPPA++LFP +  S+ P ++IS ++ + DLVLIAFD TW+
Sbjct: 74  RASSVTSRRLRRGLSPILDRSPPALYLFPSSASSTTPALHISAVHPSADLVLIAFDATWQ 133

Query: 138 HAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSELILRKEPHGGCVSTMEAVARCLR 197
           HA+EMVR+SE+FLS FA RVCL+ DESV GGSI+DSELILRKEP  GCVSTMEAVAR LR
Sbjct: 134 HAREMVRASEDFLSEFATRVCLDVDESVGGGSIYDSELILRKEPFAGCVSTMEAVARALR 193

Query: 198 VMESDGAEIEKKLIGVLREMVRLQAGFLKPMNPRPKLLKIKNMKKKKK 245
           V+E +G EIE+KL+GVLREMVRLQAGFLKP+ PRPKLLK K   K+KK
Sbjct: 194 VLEPNGPEIEEKLVGVLREMVRLQAGFLKPVKPRPKLLKKKTEGKEKK 241

[Close]

BLAST of Lsi01G018690 vs. NCBI nr
Match: gi|703069082|ref|XP_010088410.1| (hypothetical protein L484_009343 [Morus notabilis])

HSP 1 Score: 302.4 bits (773), Expect = 7.5e-79
Identity = 156/234 (66.67%), Postives = 188/234 (80.34%), Query Frame = 1


Query: 18  SSPPPRRSICPNCSRPQPVCLCKFLPSPPIATKTKIIILQHPHEAQHKLSTTPILTKCLL 77
           S+   RR ICPNCSRP PVCLC  LP+ PI T T+II+L HPHE QHKLSTTPILTKCL 
Sbjct: 25  STTSRRRPICPNCSRPSPVCLCHALPAQPIPTTTQIIVLHHPHEVQHKLSTTPILTKCLS 84

Query: 78  NATTIVNRRLKPGLSEILDRSPPAVFLFPPTPHSSPPINISEL-NLTTDLVLIAFDGTWK 137
           NAT +V RRL+ GLS +LD+SPPA++LFP TP+SSP I +S+L +     VLIAFD TWK
Sbjct: 85  NATAVVGRRLRHGLSPLLDQSPPAIYLFPSTPNSSPAITLSQLRHRRPPSVLIAFDATWK 144

Query: 138 HAKEMVRSSEEFLSRFARRVCLEFDESVEGGSIFDSELILRKEPHGGCVSTMEAVARCLR 197
           HA+EMVR+SE+FL  FA+RVCLE DESV+GG+IFDSELILRKEP GGCV+TMEAVAR L 
Sbjct: 145 HAREMVRASEDFLWGFAQRVCLEVDESVKGGTIFDSELILRKEPFGGCVTTMEAVARTLG 204

Query: 198 VMESDGAEIEKKLIGVLREMVRLQAGFLKPMNPRPKLLKIKNMKKKKKNEREDE 251
           V+E +G +IE +L+G+LREMVRLQAG+L+P+ PRPKL+K K   +K     EDE
Sbjct: 205 VIEPNGPDIEDRLVGLLREMVRLQAGYLRPVMPRPKLVKKKGKGEKVVVVEEDE 258

The following BLAST results are available for this feature:

BLAST of Lsi01G018690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DTWD2_MACFA	1.7e-14	29.80	DTW domain-containing protein 2 OS=Macaca fascicularis GN=DTWD2 PE=2 SV=1	[more]
DTWD2_HUMAN	5.0e-14	28.90	DTW domain-containing protein 2 OS=Homo sapiens GN=DTWD2 PE=1 SV=1	[more]

BLAST of Lsi01G018690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW36_CUCSA	4.7e-112	85.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G165850 PE=4 SV=1	[more]
W9QQG3_9ROSA	5.2e-79	66.67	Uncharacterized protein OS=Morus notabilis GN=L484_009343 PE=4 SV=1	[more]
A0A0L9U7H5_PHAAN	6.8e-79	68.42	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g215000 PE=4 SV=1	[more]
A0A0S3RXC5_PHAAN	6.8e-79	68.42	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G278000 PE=...	[more]
V7CY43_PHAVU	4.9e-77	67.24	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G131900g PE=4 SV=1	[more]

BLAST of Lsi01G018690 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41750.1	2.2e-60	56.10	DTW domain-containing protein	[more]

BLAST of Lsi01G018690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121687\|ref\|XP_008460775.1\|	5.5e-114	86.45	PREDICTED: LOW QUALITY PROTEIN: DTW domain-containing protein 2 [Cucumis melo]	[more]
gi\|449463356\|ref\|XP_004149400.1\|	6.7e-112	85.26	PREDICTED: DTW domain-containing protein 2 [Cucumis sativus]	[more]
gi\|1009160068\|ref\|XP_015898156.1\|	1.4e-88	69.83	PREDICTED: DTW domain-containing protein 2 [Ziziphus jujuba]	[more]
gi\|950950449\|ref\|XP_014495398.1\|	2.0e-79	68.86	PREDICTED: DTW domain-containing protein 2 [Vigna radiata var. radiata]	[more]
gi\|703069082\|ref\|XP_010088410.1\|	7.5e-79	66.67	hypothetical protein L484_009343 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005636	DTW

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G018690.1	Lsi01G018690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005636	DTW	PFAM	PF03942	DTW	coord: 25..220 score: 5.7
IPR005636	DTW	SMART	SM01144	DTW_2a	coord: 23..225 score: 3.8
None	No IPR available	PANTHER	PTHR21392	UNCHARACTERIZED	coord: 1..250 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G018690	Csa4G165850	Cucumber (Chinese Long) v2	culsiB260
Lsi01G018690	CSPI04G10560	Wild cucumber (PI 183967)	cpilsiB259
Lsi01G018690	Cucsa.374670	Cucumber (Gy14) v1	cgylsiB606
Lsi01G018690	CmaCh03G000610	Cucurbita maxima (Rimu)	cmalsiB603
Lsi01G018690	CmoCh03G000600	Cucurbita moschata (Rifu)	cmolsiB590
Lsi01G018690	Cla002761	Watermelon (97103) v1	lsiwmB156
Lsi01G018690	MELO3C023145	Melon (DHL92) v3.5.1	lsimeB152
Lsi01G018690	ClCG04G000150	Watermelon (Charleston Gray)	lsiwcgB135
Lsi01G018690	Cla97C04G068580	Watermelon (97103) v2	lsiwmbB133
Lsi01G018690	Cp4.1LG10g11610	Cucurbita pepo (Zucchini)	cpelsiB051
Lsi01G018690	CsGy4G010200	Cucumber (Gy14) v2	cgyblsiB245
Lsi01G018690	Carg22449	Silver-seed gourd	carlsiB171
Lsi01G018690	CsaV3_4G011670	Cucumber (Chinese Long) v3	cuclsiB281

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G018690	Cucurbita maxima (Rimu)	cmalsiB598
Lsi01G018690	Cucurbita maxima (Rimu)	cmalsiB787
Lsi01G018690	Cucurbita moschata (Rifu)	cmolsiB583
Lsi01G018690	Cucurbita moschata (Rifu)	cmolsiB777
Lsi01G018690	Cucurbita moschata (Rifu)	cmolsiB780
Lsi01G018690	Cucurbita pepo (Zucchini)	cpelsiB055
Lsi01G018690	Cucurbita pepo (Zucchini)	cpelsiB392
Lsi01G018690	Cucurbita pepo (Zucchini)	cpelsiB398
Lsi01G018690	Watermelon (97103) v1	lsiwmB150
Lsi01G018690	Melon (DHL92) v3.6.1	lsimedB166
Lsi01G018690	Silver-seed gourd	carlsiB256
Lsi01G018690	Silver-seed gourd	carlsiB170