Lsi04G002870 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi04G002870
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr04 : 2877916 .. 2880730 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTACGATGCTATGGAGAGACTTGCCCCTATTTTGACACTTGTACATGTTACTATGATGGTACATCAAAAAAGCTTCTTTAACCAATTGAGTAGATCAAGAAAACAACATTAGCCAAAGTGAGTTGAATATGTAAAACATTAAACCGTAGATGCACACACACAGTTGAAAATTAAGTTCCTACTCTCGACTCATATGATGTGCTATACCACCACGTAAAAAGGGTAGAACAATTAGCTCATAATTAAGGATTACTATTGTATATAAACACTCATCAAGGAAAGCAACTTTCAAAATTGACTTAGTGCAATCTGATTCATGTACTTATAATGAATTTTAAAGCATATGTATGAAACAAAATGGATGAAATTTCTAAGAAAAATAACATCATAGTTGAATTTTTGTTAAAAATTTTGAGTTTTAATAAAGTTATTTAATGGTTAATTTTTAGGAAAATTATTACAAATAAAAAAAAAAATATCAAACTATTTATAAATATAAAAAAATTTCACTATCCATCCATGATAGATCGCGATAAACTTATGGCTTAAGTAATTAATTATTAAACGCAAAAAAATTTATTATTTAAGCTATGCAAATTGTCCAGAATTTTTTTATTTTGAGAAAAATTTTCCTCAAGTAAAATATAAAATATTGACAAACTGTTCTAGTCGTATTTTTTGAACTACTCTATATTACTTTTTTTTCTTTTTCTTTTTTGAAAAGTGCTCTATATTACTCTGTCACTTCATAATCTTAATCACAAACTTATAATGTTAATTGACCTTGACTTACCGTATGGAAAAAATTGACCTTGACATAGTAAACTATTGATGTAATATGATTATTTTTCTAATCTCTTACTTTTGCAAATACAATAAAATAAAAAAAATTATTTTAAATAACAAAACTGCTGTAAATATTTACAAATATAACAAAATGTCATACTTTATCAGTGACAGACAATAATAGACATGGATAGACATCTATCTGTATCTATCAATGATAAATGATAGTAGTCTATTAATGTCTATAAAAAAATAACATTTTACTATATTTGTAAACATTTTCGTTTATATTTGAAAACAACTCTAAAATAAAAGTTTCCACAGGAAACTAATTTATGATATATGATACTTCTTAAGAAATAAAACATAATTTTTCTTTTAATTATTATTTACTAAAGAAAACTGATATTTGATTGTGACCGCAGATATAGAAAGAGAGAGATCTTTATTTAAATATAAGTATCTTTATATGATGATAAATAAAGATGAGATGGGCCTGATTGAAATTCACTTGAAGGCCCATTGATTTTAGATCGAAAGCCCATAACCAATTGAAAAGTTGCTGTTTAAATGGGCCATGCTTTGCAAGCGTCACGGGCCGGCCCAATATTGACGTCGAACGCGTGTATTGCAATTTGCATCTCTATGACTGTGGAAGGGAGAGAATGGTAGTCGCCGTTCTCTAGTGTAGAAAATTGAAGGCTGTGTTCTTGGAACTAAGCCACAACCACCTGCCTTTATTGTTTCAACTGAGGTAGCAAGAACATCTCAAACCACAGCCAACCCGAGACCAAGAATGGTGTGATGTCGATCAAGCACTCGTTTAATGACTTTTAGCCTCGAGGCGACAAAATTGTTAGATGACATGATATTAAATTTTCCGGTCATCAGTTTAAACTTTTGGATTGGTGATTTAACAAAAATCATAACGAAAAGGAGTCAAACTAGAACGAAAACAATTATTCTAAAGAAAATCAAATTCTAACTGTAGTTTGATAGTGGAAGCTACAAATCAGGTGGTAGCAATAAATTTGAAGATCAAAACCAATAACCATAACTAATTAGAATATCTTATAATAGGATACAACTTTTCTCATCCAAACGTATCAAACAGACACCTATATCTCTTTTAAGAGGTGTTTAGAGTGAGAATATGAGTTGAGATATAAACTCAATTAAATGATTGAGAGGTCAATTTTATAATTCACAGATATTTTATAGTCACGTCTATAGTGCATTCAACCCTCATCACTATTGATGTCTTCATTGCTACTTTGGCGGCTAACTCTGGTGACATCTATCAGCGGCCAACTCCAACCACATTTGACCACCGCCATCGACGATCAACTCGGACGACCTTCGATGGCGCGACTAGTATTTTGTAGTCGTTTTTTTTTATAGTAATTGTGCATTAATAAAAAAACACTTTTGTTAGTATCAATTTCTCTAATTCATTCAACGAGATATCTATCTTTTGCAATGCATGTCAATATGATAAATCTCATATTTTTACTTTTTAAATCTTGAAACACCCTAACAATCGAGCCATCCAAGCTAGTTTCATGGGAGTTATGCCTTTTATGGTATTTCGTATTTGAGGATTTAAAAGAAAAAGTTTGAGATTTACTATATTGATAACACTTTTGTTGATGTGCGGCCTAATCTTTAGTGTCAAACATCTTTGAGATGACTAAAATATATAAGACACAACGAGACTTGATTGTGAACTTTTAAAATTTTGTACCAGAAGTCACATTTACCTTTAACTTTTGGAGAGCGACATAAATTATCTTTAAACGTTCCTTCTAACATTACCTTCCAACATGTTATCTAAAGTTAATTTTTCTCTACTTGAGTTAATAATTGAAAGGACACATTTTACACAATAGAACATAAAAAGAATTAAGAAGAGAAACTCTGTGATTTGTCTTACACTTTTATTCTATCTCACAACCCACATATATATATACAAATAGATGGCAAGTGGTTACAAAGAAGAAGAGATAATCAAGGAAGTGGTGTGA

mRNA sequence

ATGTTATCGAAAGCCCATAACCAATTGAAAAGTTGCTGTTTAAATGGGCCATGCTTTGCAAGCGTCACGGGCCGGCCCAATATTGACGTCGAACGCGTGTATTGCAATTTGCATCTCTATGACTGTGGAAGGGAGAGAATGAAAATTGAAGGCTGTGTTCTTGGAACTAAGCCACAACCACCTGCCTTTATTGTTTCAACTGAGGTAGCAAGAACATCTCAAACCACAGCCAACCCGAGACCAAGAATGATGGCAAGTGGTTACAAAGAAGAAGAGATAATCAAGGAAGTGGTGTGA

Coding sequence (CDS)

ATGTTATCGAAAGCCCATAACCAATTGAAAAGTTGCTGTTTAAATGGGCCATGCTTTGCAAGCGTCACGGGCCGGCCCAATATTGACGTCGAACGCGTGTATTGCAATTTGCATCTCTATGACTGTGGAAGGGAGAGAATGAAAATTGAAGGCTGTGTTCTTGGAACTAAGCCACAACCACCTGCCTTTATTGTTTCAACTGAGGTAGCAAGAACATCTCAAACCACAGCCAACCCGAGACCAAGAATGATGGCAAGTGGTTACAAAGAAGAAGAGATAATCAAGGAAGTGGTGTGA

Protein sequence

MLSKAHNQLKSCCLNGPCFASVTGRPNIDVERVYCNLHLYDCGRERMKIEGCVLGTKPQPPAFIVSTEVARTSQTTANPRPRMMASGYKEEEIIKEVV
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G002870.1Lsi04G002870.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G002870Cla97C05G104880Watermelon (97103) v2lsiwmbB284
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G002870Silver-seed gourdcarlsiB539
Lsi04G002870Silver-seed gourdcarlsiB766
Lsi04G002870Silver-seed gourdcarlsiB767
Lsi04G002870Silver-seed gourdcarlsiB953
Lsi04G002870Cucumber (Chinese Long) v3cuclsiB063
Lsi04G002870Cucumber (Chinese Long) v3cuclsiB060
Lsi04G002870Cucumber (Chinese Long) v3cuclsiB393
Lsi04G002870Cucumber (Chinese Long) v3cuclsiB398
Lsi04G002870Watermelon (97103) v2lsiwmbB282
Lsi04G002870Watermelon (97103) v2lsiwmbB294
Lsi04G002870Wax gourdlsiwgoB356
Lsi04G002870Wax gourdlsiwgoB380
Lsi04G002870Bottle gourd (USVL1VR-Ls)lsilsiB103
Lsi04G002870Bottle gourd (USVL1VR-Ls)lsilsiB138
Lsi04G002870Cucumber (Gy14) v1cgylsiB340
Lsi04G002870Cucumber (Gy14) v1cgylsiB455
Lsi04G002870Cucumber (Gy14) v1cgylsiB465
Lsi04G002870Cucurbita maxima (Rimu)cmalsiB058
Lsi04G002870Cucurbita maxima (Rimu)cmalsiB123
Lsi04G002870Cucurbita maxima (Rimu)cmalsiB379
Lsi04G002870Cucurbita maxima (Rimu)cmalsiB669
Lsi04G002870Cucurbita maxima (Rimu)cmalsiB682
Lsi04G002870Cucurbita maxima (Rimu)cmalsiB683
Lsi04G002870Cucurbita moschata (Rifu)cmolsiB046
Lsi04G002870Cucurbita moschata (Rifu)cmolsiB364
Lsi04G002870Cucurbita moschata (Rifu)cmolsiB660
Lsi04G002870Cucurbita moschata (Rifu)cmolsiB675
Lsi04G002870Cucurbita pepo (Zucchini)cpelsiB032
Lsi04G002870Cucurbita pepo (Zucchini)cpelsiB352
Lsi04G002870Cucurbita pepo (Zucchini)cpelsiB364
Lsi04G002870Wild cucumber (PI 183967)cpilsiB054
Lsi04G002870Wild cucumber (PI 183967)cpilsiB057
Lsi04G002870Wild cucumber (PI 183967)cpilsiB372
Lsi04G002870Wild cucumber (PI 183967)cpilsiB377
Lsi04G002870Cucumber (Chinese Long) v2culsiB054
Lsi04G002870Cucumber (Chinese Long) v2culsiB368
Lsi04G002870Cucumber (Chinese Long) v2culsiB373
Lsi04G002870Melon (DHL92) v3.5.1lsimeB281
Lsi04G002870Melon (DHL92) v3.5.1lsimeB288
Lsi04G002870Melon (DHL92) v3.5.1lsimeB294
Lsi04G002870Watermelon (Charleston Gray)lsiwcgB283
Lsi04G002870Watermelon (Charleston Gray)lsiwcgB293
Lsi04G002870Watermelon (97103) v1lsiwmB312
Lsi04G002870Watermelon (97103) v1lsiwmB329
Lsi04G002870Watermelon (97103) v1lsiwmB341
Lsi04G002870Cucumber (Gy14) v2cgyblsiB049
Lsi04G002870Cucumber (Gy14) v2cgyblsiB337
Lsi04G002870Melon (DHL92) v3.6.1lsimedB297
Lsi04G002870Melon (DHL92) v3.6.1lsimedB307