Lsi06G004240 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTAAATGTGAGTGTCAGGCCCTTGCCCACATTCTATCAGTACTTTCACACGCGACTAACCAAAGCAAGAAGCTATTTTCTTTAGTATTTTTGAGCCTCGGACTATTTTTCATTTGGCCCTAAGAAGGACCATCCCGTACAAATTTTCCATATGGTTTCAATGTCACTCTCAAACTTCCGCGCTTTCCTTTCTTCCAGTCCCACTCCTTAATCCTTCATCTCACTGTGCAGCTCCAATTTGTTGGTGCCAATCCAAATCTCTGTTCTTATTTCATTTGTTTCTCACACATGAATTCCCTTCATCGCATTGGAATTCTCTCTTCAACGAATAAGAATCGAATTCTTCAACTGCTTCTGCAAATCAAACAAACCCATTTCGGTTCTTCCTTCCATGGTAGACCCTTCTCAAACAGATCTTCTTCCCCTTCCTCCGGCAAGTTTGGCAGTGGTGACGATGACTGGAATGATACTTGGGAATCTGCGTGGCTTCCCGAAGACCTTTCGCCGAGGAACAAAGCGCCATGGGAGAGCGATGTAAACTTCCCCTCTGGAAACCCTACAATTGTGTTTCCGTCGGACGTGGATGCCGAAACCAAAGCGTTCGTTGAGGACATGAATGAGAATTGGGACGAGAGGCGAAAAGCATCACAGACGCAGAAACAAGGAGTGAATCAGCAAAAAAAGGAAGGTGATGGTGATGGCGGCGGCGGCGGCGGTGGGTCGCTTTATAGCTTGGAAAACATAAAGAAGGACTATAGATTGAAGAAACAGAGGATTCATGCTAATTTGTGGATGAAGGAGATTGAGAAGCAAGAGGAGGCTAGGTTGGGGGATTCCACTACAGGCAGTGGGGATGACATTGAAAGATTGATGGATGGCTGCTCTGAGTGAGTTATTCTTTATCTCTTGTTAGTGCAAATGGTTAAAGCCTGATGCTTGTGGTTTTTATCTGCTGATCATATTATCTAGTAAGTAAAGATGTTTGTTAATTGGTTTAAGGAAGTAGGGTTTTGAATGTTGTAAGATACCTGAATCCAAGCAGTTTTTTTAATGGAAAACCAAACTTTTATTGAGAAATATGATAGAGTATAAAAGGGTATACAAAATAGAACTAGCCCCATGAAAAGAGTCCCAACACTAACTAAAAAAAGGACTCTAATCTAAAAGAATAAGACTCCATATTCATTTACAAACTTACAAAAAGCTGGCCGCCGATGCCAGGACGATGTAGAGGAGGTATTAAATCTAACAATACTTAGGCACAAAAGATACTTAATGGTTAAAGCCTGATGTTTGTGGTTTTTCTCTGCTGATCATATTATCTAGTAAAGATGTTTGTTAATTGGATTCAAGGAAGTAGGGATTGGAATGTTGCAAGGTATCTGGATTCAAGCCTTTTTTATCCTTTGTTAATGGGAAACCGAACTTTTATTGAGCAATCTGGAAGAATATACGAGGGTATAAAAAAAGAACTAACCTATGAATAGGAGTCCCAACACTAACTAGAAAATGACTTTGTTGAGGATTCCATATTAAAAAAATCAAGGACCTCACACTCTTAATATGATAGATGGGTTACTCTTCTCATTGTCAATTAGTTTAACCTCATTTTATCTAATAGACTCCAATCTAAAAGAATAAGACCTAACAGACAATTACAAAAACGTGACTGATGCCCACAATGAGGTAAATGAGGTATTAAATCTAACAATACTTAGGCCTAAAAGATACTTAACAATTTAGGACCCTTGTCATCAAGAATTGGCTTGGGTACCCTAAGCCAGCTAGAGATTAATGGTCTGGTCAAGAGCATAATTTAAGGAGTGGTCACTCTTGTTCATATAAAAAGGAAACACAATAAGGAAAATCTGTCTGCAAGTTACTGCCTTGTTATTTTATTTTATTTTTTTTCCTCTTTTTTGTTTTTCTCTCCAAGCACAACAAATCTAAACTGCTATGGTATGGTTGCAGGATTTTTGAGTCTGTCAATGATGATTTAAACCATTCAAAAGTTCCGAGTTCTTCAGAGTTTAGAAATAAACCTGATGGATGGGAAACAGTATCCAAAGGTCATGATGGAAATGTATGGGAGATGACACAAAGAGAAGAAGACATTCTTCTTCAGGAGTTTGATCGTCGTATTGCATACAACAAATTTCAGGTGCATTAATATTTCTTCATCTTTTTCTTTGTTTTTTTTTTAAAAGTAGTGTTTCCTTATTTTGCTAACAAAACATCTCATTAGAAAGATGAAATATACAAGAGTCCTCTAAGTGAAAGAGATAACAATATAACATTTTAGTCAACTTGGCATAGCTCAGTTGGTTAAGACATATACCCTTGACCAAGAGGTCTGATTCCCACTCTCACACATTATTGAGCTCATTTTATATATATATATAACATCCCATAACTCTGTTGAAGACCATTCTTCTGAGCTAAATTACAAAGGTTGAAATGCATATAATCACAAAACTCTATGGCTTCTCGTATAATAACTAAAATAGCTCATTTATTTACTGATACAATACGTAATCGCTCATGTTATCATGCCAACTAAATCCAGGTCTAGTATGCATATACCATGGAATTCAGAACTCAAGATTTTCTGACTTTCTGGTTGTAGCTATCAAATTCAGACTCAGTTCACTGAGAACGCGTTGAAAAACTTCTAGACAAGAAAAATCAAGGAAGAAAACTATAACCAACTCGTCAACAACAGGACTAGTGTCATTGCATTGTTTACAGTTGAAATGATTAATCATTAATTGATAATTTGATGTTACAATTTGAACTTTCTTTAATCAAGGATATCATTTCATTCATTTGGAGTTCACCATGCCCCTCTATGTTTTCCCTCTGCACTGTTACTTATACAAACTAACAATCTGGCATGAGATTCCACTGATATTTGAACTCATTTCTCTAGATTTTTTTTTTCATTTTATGAAACTCTCTCTTTAGCATACCCATTACCGAGTTGCTCGATTTCATGTGCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCAATCGATGGGTGGAAATACATGATAGAGGAATTTGGGCCAAATGCCAAGAAAGGAAAAGGTAGCGTTTCGAGGTTGCCTAGTCTTTCTGATTCTTCAACCCAACCCTTCAAGGAGGAAAAAGTTGCAGCCTCCCCTTCTCTCAGACCCTTGAAGAGGATTTAACTCTTTGCAAGCTATTTCTTGGACCATTTGTGACTTAAAAAGGTTAGCAACCATTTGAAAAGCCATCTCATGCTCTCCAATTATAATGTTATGTTGGTCTTATTGATGTTTGTACGTAATGATTCTAGTCTGAGTATCCTTGCTTGATATATCATGAAGCAAAATGAAAGTCTTGCACTTGGTTCTAGGGGTGTGCATTGAGGGCCGTAAAACCGAAATCGATCGAACTGAAGCCGGTTGGTTGGTTTGGCACCAATGTCGGTCGGCATTGGTTGTTGTATTTAAAAACCAACCGTTTGGTTGGTCGGCTGCACCAAAATGCGAGAGGCCCAACCGACCTCTATAGTATGTTCTTTAAAATATAATTTTGGAAATCAGGTTTTTTTTAGCAATTCAGCAGCGCAGCCACTCGGCTCACCTTCTCTCTAAATTCTCACGCAAAGTGCTGCTTGATTACACTATCCATCTGTTTTGTCGACACTGTCGCCTGACTCCATCTGTTTCGCACAGCTCGTCTCTGGTGTCCTCTCTTCGACTCCAACCAATGCCGCTCAGCACTACTTGGTTCATTGAAGGACGAGTTATGTTTTTGAAAATTTGAAAACATTACCAGAAATTTGCATAAAATTTTAAGACCTGTTCTGAAAATGTTTTTTTTGTCTTAAGTAAAGTAATTGTGTAAATGAAGGATTGAGCTTTCGACCTCTAAGAAAGGTCATGTCAATTACTCTCGATCTAAGCTCATTTTAGCTAAAAATGAAAATTTTTAAATTGCACGTGTTAGGTTATGAGATGTATATTTGAGGAAATGTGAATAAACTATGTGCTCACTTAAAGTTTATATC ACTAAATGTGAGTGTCAGGCCCTTGCCCACATTCTATCAGTACTTTCACACGCGACTAACCAAAGCAAGAAGCTATTTTCTTTAGTATTTTTGAGCCTCGGACTATTTTTCATTTGGCCCTAAGAAGGACCATCCCGTACAAATTTTCCATATGGTTTCAATGTCACTCTCAAACTTCCGCGCTTTCCTTTCTTCCAGTCCCACTCCTTAATCCTTCATCTCACTGTGCAGCTCCAATTTGTTGGTGCCAATCCAAATCTCTGTTCTTATTTCATTTGTTTCTCACACATGAATTCCCTTCATCGCATTGGAATTCTCTCTTCAACGAATAAGAATCGAATTCTTCAACTGCTTCTGCAAATCAAACAAACCCATTTCGGTTCTTCCTTCCATGGTAGACCCTTCTCAAACAGATCTTCTTCCCCTTCCTCCGGCAAGTTTGGCAGTGGTGACGATGACTGGAATGATACTTGGGAATCTGCGTGGCTTCCCGAAGACCTTTCGCCGAGGAACAAAGCGCCATGGGAGAGCGATGTAAACTTCCCCTCTGGAAACCCTACAATTGTGTTTCCGTCGGACGTGGATGCCGAAACCAAAGCGTTCGTTGAGGACATGAATGAGAATTGGGACGAGAGGCGAAAAGCATCACAGACGCAGAAACAAGGAGTGAATCAGCAAAAAAAGGAAGGTGATGGTGATGGCGGCGGCGGCGGCGGTGGGTCGCTTTATAGCTTGGAAAACATAAAGAAGGACTATAGATTGAAGAAACAGAGGATTCATGCTAATTTGTGGATGAAGGAGATTGAGAAGCAAGAGGAGGCTAGGTTGGGGGATTCCACTACAGGCAGTGGGGATGACATTGAAAGATTGATGGATGGCTGCTCTGAGATTTTTGAGTCTGTCAATGATGATTTAAACCATTCAAAAGTTCCGAGTTCTTCAGAGTTTAGAAATAAACCTGATGGATGGGAAACAGTATCCAAAGGTCATGATGGAAATGTATGGGAGATGACACAAAGAGAAGAAGACATTCTTCTTCAGGAGTTTGATCGTCGTATTGCATACAACAAATTTCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCAATCGATGGGTGGAAATACATGATAGAGGAATTTGGGCCAAATGCCAAGAAAGGAAAAGGTAGCGTTTCGAGGTTGCCTAGTCTTTCTGATTCTTCAACCCAACCCTTCAAGGAGGAAAAAGTTGCAGCCTCCCCTTCTCTCAGACCCTTGAAGAGGATTTAACTCTTTGCAAGCTATTTCTTGGACCATTTGTGACTTAAAAAGCTCGTCTCTGGTGTCCTCTCTTCGACTCCAACCAATGCCGCTCAGCACTACTTGGTTCATTGAAGGACGAGTTATGTTTTTGAAAATTTGAAAACATTACCAGAAATTTGCATAAAATTTTAAGACCTGTTCTGAAAATGTTTTTTTTGTCTTAAGTAAAGTAATTGTGTAAATGAAGGATTGAGCTTTCGACCTCTAAGAAAGGTCATGTCAATTACTCTCGATCTAAGCTCATTTTAGCTAAAAATGAAAATTTTTAAATTGCACGTGTTAGGTTATGAGATGTATATTTGAGGAAATGTGAATAAACTATGTGCTCACTTAAAGTTTATATC ATGAATTCCCTTCATCGCATTGGAATTCTCTCTTCAACGAATAAGAATCGAATTCTTCAACTGCTTCTGCAAATCAAACAAACCCATTTCGGTTCTTCCTTCCATGGTAGACCCTTCTCAAACAGATCTTCTTCCCCTTCCTCCGGCAAGTTTGGCAGTGGTGACGATGACTGGAATGATACTTGGGAATCTGCGTGGCTTCCCGAAGACCTTTCGCCGAGGAACAAAGCGCCATGGGAGAGCGATGTAAACTTCCCCTCTGGAAACCCTACAATTGTGTTTCCGTCGGACGTGGATGCCGAAACCAAAGCGTTCGTTGAGGACATGAATGAGAATTGGGACGAGAGGCGAAAAGCATCACAGACGCAGAAACAAGGAGTGAATCAGCAAAAAAAGGAAGGTGATGGTGATGGCGGCGGCGGCGGCGGTGGGTCGCTTTATAGCTTGGAAAACATAAAGAAGGACTATAGATTGAAGAAACAGAGGATTCATGCTAATTTGTGGATGAAGGAGATTGAGAAGCAAGAGGAGGCTAGGTTGGGGGATTCCACTACAGGCAGTGGGGATGACATTGAAAGATTGATGGATGGCTGCTCTGAGATTTTTGAGTCTGTCAATGATGATTTAAACCATTCAAAAGTTCCGAGTTCTTCAGAGTTTAGAAATAAACCTGATGGATGGGAAACAGTATCCAAAGGTCATGATGGAAATGTATGGGAGATGACACAAAGAGAAGAAGACATTCTTCTTCAGGAGTTTGATCGTCGTATTGCATACAACAAATTTCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCAATCGATGGGTGGAAATACATGATAGAGGAATTTGGGCCAAATGCCAAGAAAGGAAAAGGTAGCGTTTCGAGGTTGCCTAGTCTTTCTGATTCTTCAACCCAACCCTTCAAGGAGGAAAAAGTTGCAGCCTCCCCTTCTCTCAGACCCTTGAAGAGGATTTAA MNSLHRIGILSSTNKNRILQLLLQIKQTHFGSSFHGRPFSNRSSSPSSGKFGSGDDDWNDTWESAWLPEDLSPRNKAPWESDVNFPSGNPTIVFPSDVDAETKAFVEDMNENWDERRKASQTQKQGVNQQKKEGDGDGGGGGGGSLYSLENIKKDYRLKKQRIHANLWMKEIEKQEEARLGDSTTGSGDDIERLMDGCSEIFESVNDDLNHSKVPSSSEFRNKPDGWETVSKGHDGNVWEMTQREEDILLQEFDRRIAYNKFQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPSLSDSSTQPFKEEKVAASPSLRPLKRI
BLAST of Lsi06G004240 vs. TrEMBL
Match: A0A0A0LZT4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600820 PE=4 SV=1) HSP 1 Score: 574.7 bits (1480), Expect = 7.2e-161 Identity = 293/335 (87.46%), Postives = 309/335 (92.24%), Query Frame = 1
BLAST of Lsi06G004240 vs. TrEMBL
Match: M5XE32_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008967mg PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 4.0e-111 Identity = 213/321 (66.36%), Postives = 247/321 (76.95%), Query Frame = 1
BLAST of Lsi06G004240 vs. TrEMBL
Match: M5XCW9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009082mg PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 1.5e-110 Identity = 216/332 (65.06%), Postives = 249/332 (75.00%), Query Frame = 1
BLAST of Lsi06G004240 vs. TrEMBL
Match: A0A067KYD9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15584 PE=4 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 2.0e-110 Identity = 211/329 (64.13%), Postives = 255/329 (77.51%), Query Frame = 1
BLAST of Lsi06G004240 vs. TrEMBL
Match: F6H939_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01100 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 1.4e-108 Identity = 202/313 (64.54%), Postives = 242/313 (77.32%), Query Frame = 1
BLAST of Lsi06G004240 vs. TAIR10
Match: AT2G02880.1 (AT2G02880.1 mucin-related) HSP 1 Score: 355.9 bits (912), Expect = 2.7e-98 Identity = 197/333 (59.16%), Postives = 239/333 (71.77%), Query Frame = 1
BLAST of Lsi06G004240 vs. TAIR10
Match: AT5G62270.2 (AT5G62270.2 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 120.2 bits (300), Expect = 2.5e-27 Identity = 63/185 (34.05%), Postives = 108/185 (58.38%), Query Frame = 1
BLAST of Lsi06G004240 vs. NCBI nr
Match: gi|449452692|ref|XP_004144093.1| (PREDICTED: uncharacterized protein LOC101222958 [Cucumis sativus]) HSP 1 Score: 574.7 bits (1480), Expect = 1.0e-160 Identity = 293/335 (87.46%), Postives = 309/335 (92.24%), Query Frame = 1
BLAST of Lsi06G004240 vs. NCBI nr
Match: gi|659100348|ref|XP_008451050.1| (PREDICTED: uncharacterized protein LOC103492453 [Cucumis melo]) HSP 1 Score: 566.6 bits (1459), Expect = 2.8e-158 Identity = 286/336 (85.12%), Postives = 307/336 (91.37%), Query Frame = 1
BLAST of Lsi06G004240 vs. NCBI nr
Match: gi|1009154272|ref|XP_015895079.1| (PREDICTED: uncharacterized protein LOC107428984 [Ziziphus jujuba]) HSP 1 Score: 436.8 bits (1122), Expect = 3.4e-119 Identity = 227/330 (68.79%), Postives = 259/330 (78.48%), Query Frame = 1
BLAST of Lsi06G004240 vs. NCBI nr
Match: gi|596164706|ref|XP_007222980.1| (hypothetical protein PRUPE_ppa008967mg [Prunus persica]) HSP 1 Score: 409.5 bits (1051), Expect = 5.8e-111 Identity = 213/321 (66.36%), Postives = 247/321 (76.95%), Query Frame = 1
BLAST of Lsi06G004240 vs. NCBI nr
Match: gi|645229833|ref|XP_008221645.1| (PREDICTED: uncharacterized protein LOC103321600 [Prunus mume]) HSP 1 Score: 407.9 bits (1047), Expect = 1.7e-110 Identity = 213/321 (66.36%), Postives = 246/321 (76.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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