Lsi06G006170 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G006170
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Protein FAF-like, chloroplastic
Location	chr06 : 8682730 .. 8684227 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCCTCCTTCTTCTTCTTCTTCACTTTTCTGCAACTCTGCACCTTCAGTGGTCTTTCTCTTTAGACCGCTGCTGGTTGCTGTTGTTGCTCTTCTCTCTTCCCTCAGTTCAAAATCATGTCGCCATTGAAGATCTTTCAAGCTTCTTCTTATTCTAACCATAACAAACAGGGCATCGTCGCTGTTCTTTCCTCTGACTCTGAACACTCCCAAATTCAACCTTCTTCTCTTCGAAGAACTCTCTCTGCTGATATGTCCTCCCACAAATGGATCTCTCACATGAAAAAAGTCGCTTCTTTTCAAGAATTTCACAAACCAAAAACAGAGCATGAAACAGAGGATGAACATGAAACAGAGGGTGTTGGTGTTTGGAGCTCTATAATCAAAGAATCTCGTCAAGGTTCCAAATCAAATTCAGATCCTTATGTTCATCCTCTTCTTAAGGGATCTGGGAGGTCTTTGAGTGAAAAGAGCCTTGAGATTTGTACGGAAAGCCTCGGGTCCGAGACTGGCTCCGATGGGTTCTCGTCGTATCCGTCATCGGCGAACGGAGATACCGACGATGAGGAGGAAATTATACTTGGAGGTACTCAAACATTTGAGGTGGAGAATCAATGGAAGCCTGTGAAAATGAGCTATAAGAAATCGCCACCCCGCCGGTCGTTTCCTCCACCGCTGCCTACGCTTTCCGGCCCGGATGGCGAGTCCTTGAGGATGCAGCCTCGCCGTGACAATGGGCGGTTGGTCCTTGAAGCCATGTCCGTGCCTTCACAAAACAACTTCTGCGCTCAACGTCAAGGTGGTCGTCTTGTTCTCACACTCCTCAATCGTCATTCAGATCAGGTAATAAATCACCACTAAATTCAAAACTAAACGAGTGATGGCCATTCACATTATTTAAAAAAACAATAACATTTCAAGTATAAGAACGACTTTAAGTCAAAGGGTTACACTAAATTTAATCGTTTGATTCGTTTTTCTAATCTAGGTTGAGAAAAACGACTCCGAGGAGGAAGAGGAAGAAGAAAATGATACAAAAATGGCAAAATCATCAGAATTCCCAAGTGGGTTAGTAAACACACACAGATTAGCATCAATGATGAACAGCAAAACAATAGCTTTAGCCAACAGGAACCCATCACTTCCACCACGTCCCAAGGCGGCTCAGCCAATAATAGGCTGCACCGCACCGCCGGTGGCTGCGTCGTTGAATGCCTATGAGTACTACTGGAGGTCAAAACCGATGGGGAAAGCGGGAACGGCCGTGAACCCGCTCGGGCAGCAGCCGGCGTCATTCAAGAGCAGCAGCAGAAAGGTTATGATATGCAAGAACAGAACAGCGAATGAAGAAGAGAAATCTGTAGTAATGTGTTCAAATGGGAGTTGTAAGGAAGTCCGGCGGACGGTGGTGTTTTGGGAGCCACGGTGCATTGCCACTTCCTAAAACAATTATTCCCATATTCATTTCCAAGCCTCTAACTGTTTTACCTAAATTTGAT

mRNA sequence

CCTCCTCCTTCTTCTTCTTCTTCACTTTTCTGCAACTCTGCACCTTCAGTGGTCTTTCTCTTTAGACCGCTGCTGGTTGCTGTTGTTGCTCTTCTCTCTTCCCTCAGTTCAAAATCATGTCGCCATTGAAGATCTTTCAAGCTTCTTCTTATTCTAACCATAACAAACAGGGCATCGTCGCTGTTCTTTCCTCTGACTCTGAACACTCCCAAATTCAACCTTCTTCTCTTCGAAGAACTCTCTCTGCTGATATGTCCTCCCACAAATGGATCTCTCACATGAAAAAAGTCGCTTCTTTTCAAGAATTTCACAAACCAAAAACAGAGCATGAAACAGAGGATGAACATGAAACAGAGGGTGTTGGTGTTTGGAGCTCTATAATCAAAGAATCTCGTCAAGGTTCCAAATCAAATTCAGATCCTTATGTTCATCCTCTTCTTAAGGGATCTGGGAGGTCTTTGAGTGAAAAGAGCCTTGAGATTTGTACGGAAAGCCTCGGGTCCGAGACTGGCTCCGATGGGTTCTCGTCGTATCCGTCATCGGCGAACGGAGATACCGACGATGAGGAGGAAATTATACTTGGAGGTACTCAAACATTTGAGGTGGAGAATCAATGGAAGCCTGTGAAAATGAGCTATAAGAAATCGCCACCCCGCCGGTCGTTTCCTCCACCGCTGCCTACGCTTTCCGGCCCGGATGGCGAGTCCTTGAGGATGCAGCCTCGCCGTGACAATGGGCGGTTGGTCCTTGAAGCCATGTCCGTGCCTTCACAAAACAACTTCTGCGCTCAACGTCAAGGTGGTCGTCTTGTTCTCACACTCCTCAATCGTCATTCAGATCAGGTTGAGAAAAACGACTCCGAGGAGGAAGAGGAAGAAGAAAATGATACAAAAATGGCAAAATCATCAGAATTCCCAAGTGGGTTAGTAAACACACACAGATTAGCATCAATGATGAACAGCAAAACAATAGCTTTAGCCAACAGGAACCCATCACTTCCACCACGTCCCAAGGCGGCTCAGCCAATAATAGGCTGCACCGCACCGCCGGTGGCTGCGTCGTTGAATGCCTATGAGTACTACTGGAGGTCAAAACCGATGGGGAAAGCGGGAACGGCCGTGAACCCGCTCGGGCAGCAGCCGGCGTCATTCAAGAGCAGCAGCAGAAAGGTTATGATATGCAAGAACAGAACAGCGAATGAAGAAGAGAAATCTGTAGTAATGTGTTCAAATGGGAGTTGTAAGGAAGTCCGGCGGACGGTGGTGTTTTGGGAGCCACGGTGCATTGCCACTTCCTAAAACAATTATTCCCATATTCATTTCCAAGCCTCTAACTGTTTTACCTAAATTTGAT

Coding sequence (CDS)

ATGTCGCCATTGAAGATCTTTCAAGCTTCTTCTTATTCTAACCATAACAAACAGGGCATCGTCGCTGTTCTTTCCTCTGACTCTGAACACTCCCAAATTCAACCTTCTTCTCTTCGAAGAACTCTCTCTGCTGATATGTCCTCCCACAAATGGATCTCTCACATGAAAAAAGTCGCTTCTTTTCAAGAATTTCACAAACCAAAAACAGAGCATGAAACAGAGGATGAACATGAAACAGAGGGTGTTGGTGTTTGGAGCTCTATAATCAAAGAATCTCGTCAAGGTTCCAAATCAAATTCAGATCCTTATGTTCATCCTCTTCTTAAGGGATCTGGGAGGTCTTTGAGTGAAAAGAGCCTTGAGATTTGTACGGAAAGCCTCGGGTCCGAGACTGGCTCCGATGGGTTCTCGTCGTATCCGTCATCGGCGAACGGAGATACCGACGATGAGGAGGAAATTATACTTGGAGGTACTCAAACATTTGAGGTGGAGAATCAATGGAAGCCTGTGAAAATGAGCTATAAGAAATCGCCACCCCGCCGGTCGTTTCCTCCACCGCTGCCTACGCTTTCCGGCCCGGATGGCGAGTCCTTGAGGATGCAGCCTCGCCGTGACAATGGGCGGTTGGTCCTTGAAGCCATGTCCGTGCCTTCACAAAACAACTTCTGCGCTCAACGTCAAGGTGGTCGTCTTGTTCTCACACTCCTCAATCGTCATTCAGATCAGGTTGAGAAAAACGACTCCGAGGAGGAAGAGGAAGAAGAAAATGATACAAAAATGGCAAAATCATCAGAATTCCCAAGTGGGTTAGTAAACACACACAGATTAGCATCAATGATGAACAGCAAAACAATAGCTTTAGCCAACAGGAACCCATCACTTCCACCACGTCCCAAGGCGGCTCAGCCAATAATAGGCTGCACCGCACCGCCGGTGGCTGCGTCGTTGAATGCCTATGAGTACTACTGGAGGTCAAAACCGATGGGGAAAGCGGGAACGGCCGTGAACCCGCTCGGGCAGCAGCCGGCGTCATTCAAGAGCAGCAGCAGAAAGGTTATGATATGCAAGAACAGAACAGCGAATGAAGAAGAGAAATCTGTAGTAATGTGTTCAAATGGGAGTTGTAAGGAAGTCCGGCGGACGGTGGTGTTTTGGGAGCCACGGTGCATTGCCACTTCCTAA

Protein sequence

MSPLKIFQASSYSNHNKQGIVAVLSSDSEHSQIQPSSLRRTLSADMSSHKWISHMKKVASFQEFHKPKTEHETEDEHETEGVGVWSSIIKESRQGSKSNSDPYVHPLLKGSGRSLSEKSLEICTESLGSETGSDGFSSYPSSANGDTDDEEEIILGGTQTFEVENQWKPVKMSYKKSPPRRSFPPPLPTLSGPDGESLRMQPRRDNGRLVLEAMSVPSQNNFCAQRQGGRLVLTLLNRHSDQVEKNDSEEEEEEENDTKMAKSSEFPSGLVNTHRLASMMNSKTIALANRNPSLPPRPKAAQPIIGCTAPPVAASLNAYEYYWRSKPMGKAGTAVNPLGQQPASFKSSSRKVMICKNRTANEEEKSVVMCSNGSCKEVRRTVVFWEPRCIATS

Homology

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BLAST of Lsi06G006170 vs. Swiss-Prot
Match: FAFL_ARATH (Protein FAF-like, chloroplastic OS=Arabidopsis thaliana GN=At5g22090 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-44
Identity = 167/476 (35.08%), Postives = 228/476 (47.90%), Query Frame = 1


Query: 11  SYSNHNKQGIVAVLSSDSEHSQIQPSSLRRTLSADMSSHKWISH-----MKKVASFQ--- 70
           S S   +QGIV++L   S ++   PS LRRT SAD+SS  W+S      MK+++S +   
Sbjct: 13  SSSLKKQQGIVSILGGISSNTSSAPS-LRRTFSADLSSKTWVSQNGFSPMKRISSSEKLR 72

Query: 71  ------------------EFHKPKTEHETEDEHETEGVGVWSSIIKESRQGSKSNSD--- 130
                             +  + K + + E+E E     VWSSI+ E ++   S      
Sbjct: 73  PDEEEAEEESRSGVDIWAQIQQDKNDKKKEEEIEPGQSDVWSSILSEKKKTESSKDTVPP 132

Query: 131 PYVHPLLKGSGRSLSEKSLEICTESLGSETGSDGFSSYPSSANGDTD----DEEEIILGG 190
           PYVHPL+K +  SLSEKSLEICTESLGSETG DGFSS+ SS  GD +    DE  +++  
Sbjct: 133 PYVHPLMKRAS-SLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVNV 192

Query: 191 TQT---------FEVENQWKPVKMSYKKSPPRRSFPPPLPTLSGPDGESLRMQPRRDNGR 250
           T+T           VE +   +  ++    P  SFPPP+ +LS   G SL M+ RRDNGR
Sbjct: 193 TETKVEEITETEIVVEQESSIIVPNHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRDNGR 252

Query: 251 LVLEAMSVPSQNNFCAQRQGGRLVLTLLN-------RHSDQVEK-----NDSEEEEEEEN 310
           LVLEA+S+PS NNF A+RQ GRL+LT             D+++      ++ EEEEEEE 
Sbjct: 253 LVLEAVSMPSHNNFSAKRQDGRLLLTFAEISNEPNYDKEDEIDSEVQWFDEEEEEEEEEE 312

Query: 311 DTKMAKSSEF---PSGL----------VNTHRLASMMNSKTIALANRNP----------- 370
           D +     EF   P+GL          +  HRLA     K I +  RN            
Sbjct: 313 DEEEEAPDEFAYKPNGLLYKMAQKPIPITVHRLA----HKPIGVPKRNSRWPMADEFDTK 372

Query: 371 ---------SLPPRPKAAQPIIGCTAPPV-------AASLNAYEYYWRSKPMGKAGTAVN 393
                    SLPPRP+ AQ +   T PP        AA  N  +Y W+S           
Sbjct: 373 SDLSTPVVHSLPPRPRVAQ-LARSTKPPSTVDDTVGAACFNTCDYSWKS----------- 432

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BLAST of Lsi06G006170 vs. Swiss-Prot
Match: FAF3_ARATH (Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana GN=FAF3 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.6e-11
Identity = 66/186 (35.48%), Postives = 95/186 (51.08%), Query Frame = 1


Query: 86  SSIIKESRQGSKSNSDPYVHPLLKGSGRSLSEKSLEICTESLGSETGSDGFSSYPSSANG 145
           SS   ++   S+  S  YV      S R+LS++SL +CTE+LGSE+GS            
Sbjct: 81  SSSSTKTTTSSEKESSYYVQR--PSSCRALSDQSLALCTENLGSESGS------------ 140

Query: 146 DTDDEEEIILGGTQT---FEVENQWKPVKMSYKKSPPRRSFPPPLPTLSGPDGESLRMQP 205
           D  D +E+     QT    E   + + +K S K+S      PPPL T+ G   + ++M+P
Sbjct: 141 DVTDIDELFSLDVQTKNLGETTTETRTLK-SRKRSVSPSDLPPPLTTMRG--FQCIQMRP 200

Query: 206 RRDNGRLVLEAMSVPSQNN-FCAQRQGGRLVLTLLNRHSDQVEKNDS----------EEE 258
            R+NGRLV+ A + P +N  F A R  GRL L++L   ++ VE  +           EEE
Sbjct: 201 HRENGRLVMTATNAPPRNGCFQADRSNGRLRLSILKDSNEFVENEEETIEPEETEEYEEE 249

[Close]

BLAST of Lsi06G006170 vs. Swiss-Prot
Match: FAF4_ARATH (Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana GN=FAF4 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-10
Identity = 63/179 (35.20%), Postives = 90/179 (50.28%), Query Frame = 1


Query: 83  GVWSSIIKESRQGSKSNS-DPYVHPLLKG--SGRSLSEKSLEICTESLGSETGSDGFSSY 142
           G WS +  ES   S SN  +    PL +   S R+LS++SL +CTESLGSETGSD     
Sbjct: 75  GSWSFL--ESLSNSSSNDKEKKTLPLFQSPSSRRTLSDESLALCTESLGSETGSDIIHED 134

Query: 143 PSSANGDTDDEEEIILGGTQTFEVENQWKPVKMSYKKSPPRRSFPPPLPTLSGPDGESLR 202
             S + +    E      T+T    +   P +   K++    S PPPL ++ G D   + 
Sbjct: 135 MFSISSELQTME------TRTTSTTSN--PSRQDRKRNT-MASLPPPLTSMIGFD--CIE 194

Query: 203 MQPRRDNGRLVLEAMSVPSQNNFCAQRQGGRLVLTLLNRHSDQVEKNDSEEEEEEENDT 259
           ++  R+NGRLV+ A   P +N     R  G + L +L    D +E    EE+EEEE +T
Sbjct: 195 VKSHRENGRLVMMATRPPPRNRCLQDRSNGCVRLAILIDSDDHIETETKEEKEEEEEET 240

[Close]

BLAST of Lsi06G006170 vs. Swiss-Prot
Match: FAF2_ARATH (Protein FANTASTIC FOUR 2 OS=Arabidopsis thaliana GN=FAF2 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.9e-08
Identity = 63/178 (35.39%), Postives = 94/178 (52.81%), Query Frame = 1


Query: 103 YVHPLLKGSGRSLSEKSLEICTESLGSETGSDGFSSYPSSANGDTDDEEEIIL--GGTQT 162
           YVHP+ K S   L+EKSLE+CTESLG+ETGS            ++ DE  ++     T  
Sbjct: 44  YVHPMEKRSVSKLNEKSLEMCTESLGTETGS------------ESGDELSLLAFEATTTP 103

Query: 163 FEVENQWKPVKMSY--KKSPP---RRSFPPPLPTLSGPDGESLRM-QPRRDNGRLVLEAM 222
                Q KP + +    K+PP     SFPPP+  +   D +  RM +   ++GR+V++A+
Sbjct: 104 RAPPRQLKPQEDTNLPDKTPPMSRNNSFPPPIKFVE--DSKYNRMVRWLGEDGRIVVQAI 163

Query: 223 SVPSQNN-FCAQRQGGRLVLTLLNRHSDQVEKNDSEEEEEEEN--DTKMAKSSEFPSG 270
            V S  + F ++R  GRL L L +  S     ++ EEEEE E   D + +++ E  SG
Sbjct: 164 RVSSPPSCFVSERGEGRLRLILTSESSLLSHNHEEEEEEETEEGIDEETSENLEGKSG 207

[Close]

BLAST of Lsi06G006170 vs. Swiss-Prot
Match: FAF1_ARATH (Protein FANTASTIC FOUR 1 OS=Arabidopsis thaliana GN=FAF1 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.1e-07
Identity = 69/229 (30.13%), Postives = 108/229 (47.16%), Query Frame = 1


Query: 65  HKPKTEHETEDEHETEGVGVWS---------SIIKESRQGSKSNSDPYVHPLLKGSGRSL 124
           H PK   +  D      VG WS          I++     +K  +  YV+P+ K   RS+
Sbjct: 11  HLPKQVSQNPD------VGGWSFLQYFSEPKGIVQNREDDTKKTA--YVYPIEK---RSV 70

Query: 125 SEKSLEICTESLGSETGSDGFSSYPSSANGDTDDEEEIILGGTQTFEVENQWKPVKMSYK 184
           ++ SLE+CTESLG+E GS            D+ DE  ++       E  N  K  +++ K
Sbjct: 71  AKLSLEMCTESLGTENGS------------DSGDEMSLL-----ALEATNISKSPRLTTK 130

Query: 185 KSPP------RRSFPPPLPTLSGPDGESLRMQPRRDNGRLVLEAMSVPSQNN-FCAQRQG 244
                       SFPPPL +++G    S  ++  +++GRLV++A+ V S    F ++R+ 
Sbjct: 131 PQKETSFMTRENSFPPPLNSVNG-FNNSRMVKSYKEDGRLVVQAIRVCSPPRCFVSERRE 190

Query: 245 GRLVLTL----LN--------RHSDQVEKNDSEEEEEEENDTKMAKSSE 266
           GRL L L    LN           D+ ++ D+EEEEEEE + +  +  E
Sbjct: 191 GRLRLCLSQNSLNSQDAEEEFEEEDEDDQYDAEEEEEEEEEEEEEEEEE 210

[Close]

BLAST of Lsi06G006170 vs. TrEMBL
Match: A0A0A0M0D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G635920 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 2.2e-172
Identity = 332/397 (83.63%), Postives = 351/397 (88.41%), Query Frame = 1


Query: 1   MSPLKIFQASSYSNHNKQGIVAVLSSDSEHSQIQPSSLRRTLSADMSSHKWISHMKKVAS 60
           MSPLKIFQAS YSN  KQGIVA LSSDS+HSQIQPSSLRRTLSADMSSHKWISHMKKV+S
Sbjct: 1   MSPLKIFQAS-YSNDKKQGIVAALSSDSDHSQIQPSSLRRTLSADMSSHKWISHMKKVSS 60

Query: 61  FQEFHKPKTEHETEDEHETEGVGVWSSIIKESRQGSKSNSDPYVHPLLKGSGRSLSEKSL 120
           FQ+FH PKTE ETE      GVGVWSSI+KESRQ SK+ SDPYVHPLLK SG+ LSEKSL
Sbjct: 61  FQDFHNPKTEDETE------GVGVWSSIVKESRQESKNISDPYVHPLLKRSGKCLSEKSL 120

Query: 121 EICTESLGSETGSDGFSSYPSSANGDTDDE-EEIILGGTQTFEVENQWKPVKMSYKKSPP 180
           EICTESLGSETGSDGFSSYPSS NGDTDDE EE ++ GTQTFEVENQWKPVK+SYKKSPP
Sbjct: 121 EICTESLGSETGSDGFSSYPSSENGDTDDENEENMIEGTQTFEVENQWKPVKISYKKSPP 180

Query: 181 RRSFPPPLPTLSGPDGESLRMQPRRDNGRLVLEAMSVPSQNNFCAQRQGGRLVLTLLNRH 240
           RRS PPPLPTLSGPDGE+LRMQPRRDNGRLVLEAMSVPSQNNF AQRQ GRLVLTL++RH
Sbjct: 181 RRSLPPPLPTLSGPDGETLRMQPRRDNGRLVLEAMSVPSQNNFHAQRQDGRLVLTLVSRH 240

Query: 241 -SDQVEKND--SEEEEEEENDTKMAKSSEFPSGLVNTHRLASMMNSKTIALANRNPSLPP 300
             +QVEK D    EEE +EN+ K  K SEFP GL+ THRLASMM+SKTIALANRNPSLPP
Sbjct: 241 LINQVEKIDDWKMEEEGKENEQKTTKLSEFPRGLLTTHRLASMMSSKTIALANRNPSLPP 300

Query: 301 RPKAAQPIIGCTAPPVAASLNAYEYYWRSKPMGKAGTAVNPLGQQPASFKSSSRKVMICK 360
           RPKAAQPII C APPVAASLNAYEYYWRSKP GKAGT   P+GQQ A+FKSSSRKVMI K
Sbjct: 301 RPKAAQPIISCVAPPVAASLNAYEYYWRSKPTGKAGT---PVGQQQATFKSSSRKVMISK 360

Query: 361 NRTANEEEKSVVMCSNGSCKEVRRTVVFWEPRCIATS 394
           NRTANEEEK VVMCSNGSCKEVRRTVVFWEPRCIATS
Sbjct: 361 NRTANEEEKLVVMCSNGSCKEVRRTVVFWEPRCIATS 387

[Close]

BLAST of Lsi06G006170 vs. TrEMBL
Match: A0A0A0KI67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G426380 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.1e-67
Identity = 187/444 (42.12%), Postives = 250/444 (56.31%), Query Frame = 1


Query: 11  SYSNHNKQGIVAVL-SSDSEHSQIQPSSLRRTLSADMSSHKWISHMKKVASFQEFHKPKT 70
           +Y++  KQGI+ +L SSD  +  + P SLRRTLSADMSS KW S +KK+ S Q FH    
Sbjct: 6   NYNSLQKQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCSPIKKIPSSQAFHDNSN 65

Query: 71  EHETED-EHETEGVGVWSSI-----IKESRQGSKSNSDPYVHPLLKGSGRSLSEKSLEIC 130
            ++ +  +H       WSSI     + +    S   + PYVHPLLK +  SLS+ SL+IC
Sbjct: 66  NNKIDSSKHGVHDSVPWSSILLHNSVSDDPPKSPVVAAPYVHPLLKKTSHSLSDISLQIC 125

Query: 131 TESLGSETGSDGFSSYPSSANGDTDDEEEIILGGTQTFEVEN-QWKPVKMSYKKSPPRRS 190
           TESLGSETGSDGFSSYPSS +GD D     ++  T   E++  +WKPVK S KKSPPR S
Sbjct: 126 TESLGSETGSDGFSSYPSSEDGDFDR----LITETDYSEIDTFEWKPVKFSRKKSPPR-S 185

Query: 191 FPPPLPTLSGPDGESLRMQPRRDNGRLVLEAMSVPSQNNFCAQRQGGRLVLTLLNRHSDQ 250
           FPPP+ +L  PDG S+ +Q RR++GRL+L+A+SVPS+ NF A+R+ GRL+L+L  R  + 
Sbjct: 186 FPPPISSLDSPDGVSICIQSRREDGRLMLDAVSVPSRKNFRAERRDGRLILSLF-RTPEN 245

Query: 251 VEKNDSEEEEE--------------------------EENDTKMAKSSEFPSGLVNTHRL 310
           +  N+ EE EE                          EE +  + K+    S ++N HRL
Sbjct: 246 LLVNEEEELEEMIAGEFEEVKESEIVEVGNDENVLEVEELEIPIEKTPRLSSSVMNFHRL 305

Query: 311 ASMMNSKTIALANRNP------------------SLPPRPKAAQPIIGCTAPPVAASLNA 370
            +MM  KT  L NRNP                  SLPPRP +       TA      LNA
Sbjct: 306 TNMM-KKTNGLINRNPAWPKEKDASETPTTPLSQSLPPRPPS------LTAATAGTFLNA 365

Query: 371 YEYYWRSKPMGKAGTAVNPLGQQPASFKSSSRKVMICKNRTANEEEKSVVMCSN------ 394
           YEYYWRSKP GK+    NP GQQ       +RK++   N+ A+E+++ +V+  N      
Sbjct: 366 YEYYWRSKPTGKSAGIQNPNGQQQTQI---TRKLISSNNQMADEKQQILVLKGNRGDYLV 425

[Close]

BLAST of Lsi06G006170 vs. TrEMBL
Match: A0A067LEM2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23902 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 6.7e-65
Identity = 197/495 (39.80%), Postives = 259/495 (52.32%), Query Frame = 1


Query: 17  KQGIVAVLSSDSEHSQIQPSSLRRTLSADMSSHKWI------SHMKKVASFQEFH----- 76
           +QGIV++L SDSE    +P  LRRTLSADMSS KW+      S +KK+AS +EF      
Sbjct: 23  QQGIVSILGSDSELKTNKP--LRRTLSADMSSKKWLSQNGFSSRLKKIASSKEFSVSIIT 82

Query: 77  KPKTEHETEDEHETE--------------------GVGVWSSIIKESRQGSKS-NSDPYV 136
              +    EDE+E E                       +WSSI+ +  Q +K+    PYV
Sbjct: 83  DSSSSEGDEDEYEKETEVWSSIQQEKQKKDSSPRGQFDIWSSILTQKAQEAKNLLPPPYV 142

Query: 137 HPLLKGSGRSLSEKSLEICTESLGSETGSDGFSSYPSSANGDTDDEEEIILGGTQTFEVE 196
           HPL+K S  SLSEKSLEICTESLGSETGSDGFSSYP S  GD ++++E      +  E E
Sbjct: 143 HPLVKRSASSLSEKSLEICTESLGSETGSDGFSSYPPSETGDAEEDKEEEQQEEEEEEEE 202

Query: 197 NQ-----------WKPVKMSY----KKSPPRRSFPPPLPTLSGPDGESLRMQPRRDNGRL 256
            +           W+ +K +     KK PP R+FPPP+P+LS  DG SLRM+PRRDNGR 
Sbjct: 203 EEEKVSKNYDMEDWQVIKCNITAASKKLPP-RTFPPPIPSLSSRDGASLRMRPRRDNGRF 262

Query: 257 VLEAMSVPSQNNFCAQRQGGRLVLTLLNRHSD-------------QVEKNDSEEEEEEEN 316
           VLEA+SVPSQNNF A+RQ GRLVL+ ++                 QVE  DSEEEEEE N
Sbjct: 263 VLEAISVPSQNNFKAERQDGRLVLSFIDTPDGEEEGTKKNEMELFQVEIEDSEEEEEEVN 322

Query: 317 DT------------KMAKSSEFPSGLVNTHRLASMMNSKTIALANRN------------- 376
           +              M ++ +   G++N HRLA M+N  T+ LANRN             
Sbjct: 323 ERGGGGGGGEEMRYVMEQAPKLSGGIINVHRLALMINKPTM-LANRNTAWSNKFNEVVKF 382

Query: 377 -------------------PSLPPRPKAAQ--PIIGCTAPPVAASLNAYEYYWRSKPMGK 394
                               SLPPRP   +  P     A    AS+NAYEYYW+ KPMG 
Sbjct: 383 EEEEEEEEEVNPNPIAPLTQSLPPRPPVGRSIPKPAAVATAATASVNAYEYYWKPKPMGT 442

[Close]

BLAST of Lsi06G006170 vs. TrEMBL
Match: A0A0D2RWI8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G082500 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64
Identity = 189/464 (40.73%), Postives = 256/464 (55.17%), Query Frame = 1


Query: 17  KQGIVAVLSSDSEHSQIQPSSLRRTLSADMSSHKWISHMKKVASFQEF-----HKPKTEH 76
           KQGIV++L SD++    + SSLRRTLSADMSS KW++ +  +AS  E           E 
Sbjct: 28  KQGIVSILGSDTDQRPTKGSSLRRTLSADMSSKKWLTQLSNIASSDELPVSIADSSSEEA 87

Query: 77  ETEDEHETEGV------GVWSSIIKESRQG-SKSNSDPYVHPLLKGSGRSLSEKSLEICT 136
           E ED  E + +       +W+SII    Q  SKS   PY+HPL+K SG  LSEKSLEICT
Sbjct: 88  EEEDYQEKKALEKPAQFDIWTSIISSKPQDDSKSLPPPYIHPLVKRSGSCLSEKSLEICT 147

Query: 137 ESLGSETGSDGFSSYPSSANGDTDD---EEEIILGGTQTFEVENQW-KPVKMSY------ 196
           ESLGSETGSDGFSSYP S  GD D+   EE+  L   +    +++  +P  + Y      
Sbjct: 148 ESLGSETGSDGFSSYPPSETGDVDEDRKEEDQRLRQQKLASYDDEDDQPRILKYNNDVVA 207

Query: 197 KKSPPRRSFPPPLPTLSGPDGESLRMQPRRDNGRLVLEAMSVPSQNNFCAQRQGGRLVLT 256
           KK+P   SFPPP+P+LS  DG S+RM+  RDNGRLVLEA+SVPS+ NF AQRQ GRLVLT
Sbjct: 208 KKAPHHGSFPPPIPSLSRKDGASVRMETHRDNGRLVLEAVSVPSKKNFLAQRQDGRLVLT 267

Query: 257 L------LNRHSDQVEKNDS--------------EEEEEEENDTKMAKSSEFPSGLVNTH 316
           L      +   +++VE+ +S              +EEEE +   +M K+++  SG +N H
Sbjct: 268 LAMNEVMMIEEAEEVEEFESFGDEEKGTDQMDIIDEEEEGDRGCEMEKANKLSSGAMNVH 327

Query: 317 RLASMMNSKTIALANRNPSLP-----------------------------PRPKAAQPII 376
           RLA MMN K I LANRNP+ P                             PRP+ A+ I 
Sbjct: 328 RLAVMMN-KPIWLANRNPTWPETFDEIVKFGEEEEEKVEPSTPPPLQSPSPRPRMARLIP 387

Query: 377 GCTAPP-----VAASLNAYEYYWR--SKPMGKAGTAVNPLGQQPASFKSSSRKVMICKNR 394
               PP      AAS N+YEYYW   ++PM      + PL    A   +S   +++ +N+
Sbjct: 388 SPPPPPSSSTTTAASFNSYEYYWNRPNQPMSPKAAILAPL----ALNDNSDSHLILSQNQ 447

[Close]

BLAST of Lsi06G006170 vs. TrEMBL
Match: A0A0B0PRI4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_03861 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 9.7e-64
Identity = 189/465 (40.65%), Postives = 254/465 (54.62%), Query Frame = 1


Query: 16  NKQGIVAVLSSDSEHSQIQPSSLRRTLSADMSSHKWISHMKKVASFQEFH---KPKTEHE 75
           NKQGIV++L SD++    + SSLRRTLSADMSS KW++ +   AS  E        +  E
Sbjct: 41  NKQGIVSILGSDTDQRPTKGSSLRRTLSADMSSKKWLTQLNNTASSDELPVSIADSSSQE 100

Query: 76  TEDEHETEGVG--------VWSSIIKESRQG-SKSNSDPYVHPLLKGSGRSLSEKSLEIC 135
            E+E+  E           +W+SII    Q  SK    PY+HPL+K SG  LSEKSLEIC
Sbjct: 101 AEEENYQEKKALEKPAQFDIWTSIISSKPQDDSKPLPPPYIHPLVKRSGSCLSEKSLEIC 160

Query: 136 TESLGSETGSDGFSSYPSSANGDTDD---EEEIILGGTQTFEVENQW-KPVKMSY----- 195
           TESLGSETGSDGFSSYP S  GD ++   EE+  L   +    +++  +P  + Y     
Sbjct: 161 TESLGSETGSDGFSSYPPSETGDVEEDRKEEDQRLRQQKLASYDDEDDQPRILKYNNDVV 220

Query: 196 -KKSPPRRSFPPPLPTLSGPDGESLRMQPRRDNGRLVLEAMSVPSQNNFCAQRQGGRLVL 255
            KK+P   SFPPP+P+LS  DG S+RM+  RDNGRLVLEA+SVPS+ NF AQRQ GRLVL
Sbjct: 221 AKKAPHHGSFPPPIPSLSRKDGASVRMETHRDNGRLVLEAVSVPSKKNFLAQRQDGRLVL 280

Query: 256 TL------LNRHSDQVEKNDS--------------EEEEEEENDTKMAKSSEFPSGLVNT 315
           TL      +   +++VEK +S               EEEE +   +M K+++  SG +N 
Sbjct: 281 TLAMNEVMMIEEAEEVEKFESFGDEEKGTDQMDIIGEEEEGDRGCEMEKANKLSSGAMNV 340

Query: 316 HRLASMMNSKTIALANRNP-----------------------------SLPPRPKAAQPI 375
           HRLA MMN K I LANRNP                             SL PRP+ A+ I
Sbjct: 341 HRLAVMMN-KPIWLANRNPTWPETFDEIVKFGEEEEEKIEPSTPPPVQSLSPRPRMARLI 400

Query: 376 IGCTAPP-----VAASLNAYEYYWR--SKPMGKAGTAVNPLGQQPASFKSSSRKVMICKN 394
                PP      AAS N+YEYYW   ++PM      + P    PA   +S   +++ +N
Sbjct: 401 PSPPPPPSSTTTTAASFNSYEYYWNRPNQPMSPKAAILAP----PALNDNSDSHLILSQN 460

[Close]

BLAST of Lsi06G006170 vs. TAIR10
Match: AT5G22090.1 (AT5G22090.1 Protein of unknown function (DUF3049))

HSP 1 Score: 181.8 bits (460), Expect = 8.2e-46
Identity = 167/476 (35.08%), Postives = 228/476 (47.90%), Query Frame = 1


Query: 11  SYSNHNKQGIVAVLSSDSEHSQIQPSSLRRTLSADMSSHKWISH-----MKKVASFQ--- 70
           S S   +QGIV++L   S ++   PS LRRT SAD+SS  W+S      MK+++S +   
Sbjct: 13  SSSLKKQQGIVSILGGISSNTSSAPS-LRRTFSADLSSKTWVSQNGFSPMKRISSSEKLR 72

Query: 71  ------------------EFHKPKTEHETEDEHETEGVGVWSSIIKESRQGSKSNSD--- 130
                             +  + K + + E+E E     VWSSI+ E ++   S      
Sbjct: 73  PDEEEAEEESRSGVDIWAQIQQDKNDKKKEEEIEPGQSDVWSSILSEKKKTESSKDTVPP 132

Query: 131 PYVHPLLKGSGRSLSEKSLEICTESLGSETGSDGFSSYPSSANGDTD----DEEEIILGG 190
           PYVHPL+K +  SLSEKSLEICTESLGSETG DGFSS+ SS  GD +    DE  +++  
Sbjct: 133 PYVHPLMKRAS-SLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVNV 192

Query: 191 TQT---------FEVENQWKPVKMSYKKSPPRRSFPPPLPTLSGPDGESLRMQPRRDNGR 250
           T+T           VE +   +  ++    P  SFPPP+ +LS   G SL M+ RRDNGR
Sbjct: 193 TETKVEEITETEIVVEQESSIIVPNHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRDNGR 252

Query: 251 LVLEAMSVPSQNNFCAQRQGGRLVLTLLN-------RHSDQVEK-----NDSEEEEEEEN 310
           LVLEA+S+PS NNF A+RQ GRL+LT             D+++      ++ EEEEEEE 
Sbjct: 253 LVLEAVSMPSHNNFSAKRQDGRLLLTFAEISNEPNYDKEDEIDSEVQWFDEEEEEEEEEE 312

Query: 311 DTKMAKSSEF---PSGL----------VNTHRLASMMNSKTIALANRNP----------- 370
           D +     EF   P+GL          +  HRLA     K I +  RN            
Sbjct: 313 DEEEEAPDEFAYKPNGLLYKMAQKPIPITVHRLA----HKPIGVPKRNSRWPMADEFDTK 372

Query: 371 ---------SLPPRPKAAQPIIGCTAPPV-------AASLNAYEYYWRSKPMGKAGTAVN 393
                    SLPPRP+ AQ +   T PP        AA  N  +Y W+S           
Sbjct: 373 SDLSTPVVHSLPPRPRVAQ-LARSTKPPSTVDDTVGAACFNTCDYSWKS----------- 432

[Close]

BLAST of Lsi06G006170 vs. TAIR10
Match: AT5G19260.1 (AT5G19260.1 Protein of unknown function (DUF3049))

HSP 1 Score: 72.0 bits (175), Expect = 9.1e-13
Identity = 66/186 (35.48%), Postives = 95/186 (51.08%), Query Frame = 1


Query: 86  SSIIKESRQGSKSNSDPYVHPLLKGSGRSLSEKSLEICTESLGSETGSDGFSSYPSSANG 145
           SS   ++   S+  S  YV      S R+LS++SL +CTE+LGSE+GS            
Sbjct: 81  SSSSTKTTTSSEKESSYYVQR--PSSCRALSDQSLALCTENLGSESGS------------ 140

Query: 146 DTDDEEEIILGGTQT---FEVENQWKPVKMSYKKSPPRRSFPPPLPTLSGPDGESLRMQP 205
           D  D +E+     QT    E   + + +K S K+S      PPPL T+ G   + ++M+P
Sbjct: 141 DVTDIDELFSLDVQTKNLGETTTETRTLK-SRKRSVSPSDLPPPLTTMRG--FQCIQMRP 200

Query: 206 RRDNGRLVLEAMSVPSQNN-FCAQRQGGRLVLTLLNRHSDQVEKNDS----------EEE 258
            R+NGRLV+ A + P +N  F A R  GRL L++L   ++ VE  +           EEE
Sbjct: 201 HRENGRLVMTATNAPPRNGCFQADRSNGRLRLSILKDSNEFVENEEETIEPEETEEYEEE 249

[Close]

BLAST of Lsi06G006170 vs. TAIR10
Match: AT3G06020.1 (AT3G06020.1 Protein of unknown function (DUF3049))

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-11
Identity = 63/179 (35.20%), Postives = 90/179 (50.28%), Query Frame = 1


Query: 83  GVWSSIIKESRQGSKSNS-DPYVHPLLKG--SGRSLSEKSLEICTESLGSETGSDGFSSY 142
           G WS +  ES   S SN  +    PL +   S R+LS++SL +CTESLGSETGSD     
Sbjct: 75  GSWSFL--ESLSNSSSNDKEKKTLPLFQSPSSRRTLSDESLALCTESLGSETGSDIIHED 134

Query: 143 PSSANGDTDDEEEIILGGTQTFEVENQWKPVKMSYKKSPPRRSFPPPLPTLSGPDGESLR 202
             S + +    E      T+T    +   P +   K++    S PPPL ++ G D   + 
Sbjct: 135 MFSISSELQTME------TRTTSTTSN--PSRQDRKRNT-MASLPPPLTSMIGFD--CIE 194

Query: 203 MQPRRDNGRLVLEAMSVPSQNNFCAQRQGGRLVLTLLNRHSDQVEKNDSEEEEEEENDT 259
           ++  R+NGRLV+ A   P +N     R  G + L +L    D +E    EE+EEEE +T
Sbjct: 195 VKSHRENGRLVMMATRPPPRNRCLQDRSNGCVRLAILIDSDDHIETETKEEKEEEEEET 240

[Close]

BLAST of Lsi06G006170 vs. TAIR10
Match: AT1G03170.1 (AT1G03170.1 Protein of unknown function (DUF3049))

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-09
Identity = 63/178 (35.39%), Postives = 94/178 (52.81%), Query Frame = 1


Query: 103 YVHPLLKGSGRSLSEKSLEICTESLGSETGSDGFSSYPSSANGDTDDEEEIIL--GGTQT 162
           YVHP+ K S   L+EKSLE+CTESLG+ETGS            ++ DE  ++     T  
Sbjct: 44  YVHPMEKRSVSKLNEKSLEMCTESLGTETGS------------ESGDELSLLAFEATTTP 103

Query: 163 FEVENQWKPVKMSY--KKSPP---RRSFPPPLPTLSGPDGESLRM-QPRRDNGRLVLEAM 222
                Q KP + +    K+PP     SFPPP+  +   D +  RM +   ++GR+V++A+
Sbjct: 104 RAPPRQLKPQEDTNLPDKTPPMSRNNSFPPPIKFVE--DSKYNRMVRWLGEDGRIVVQAI 163

Query: 223 SVPSQNN-FCAQRQGGRLVLTLLNRHSDQVEKNDSEEEEEEEN--DTKMAKSSEFPSG 270
            V S  + F ++R  GRL L L +  S     ++ EEEEE E   D + +++ E  SG
Sbjct: 164 RVSSPPSCFVSERGEGRLRLILTSESSLLSHNHEEEEEEETEEGIDEETSENLEGKSG 207

[Close]

BLAST of Lsi06G006170 vs. TAIR10
Match: AT4G02810.1 (AT4G02810.1 Protein of unknown function (DUF3049))

HSP 1 Score: 57.4 bits (137), Expect = 2.3e-08
Identity = 69/229 (30.13%), Postives = 108/229 (47.16%), Query Frame = 1


Query: 65  HKPKTEHETEDEHETEGVGVWS---------SIIKESRQGSKSNSDPYVHPLLKGSGRSL 124
           H PK   +  D      VG WS          I++     +K  +  YV+P+ K   RS+
Sbjct: 11  HLPKQVSQNPD------VGGWSFLQYFSEPKGIVQNREDDTKKTA--YVYPIEK---RSV 70

Query: 125 SEKSLEICTESLGSETGSDGFSSYPSSANGDTDDEEEIILGGTQTFEVENQWKPVKMSYK 184
           ++ SLE+CTESLG+E GS            D+ DE  ++       E  N  K  +++ K
Sbjct: 71  AKLSLEMCTESLGTENGS------------DSGDEMSLL-----ALEATNISKSPRLTTK 130

Query: 185 KSPP------RRSFPPPLPTLSGPDGESLRMQPRRDNGRLVLEAMSVPSQNN-FCAQRQG 244
                       SFPPPL +++G    S  ++  +++GRLV++A+ V S    F ++R+ 
Sbjct: 131 PQKETSFMTRENSFPPPLNSVNG-FNNSRMVKSYKEDGRLVVQAIRVCSPPRCFVSERRE 190

Query: 245 GRLVLTL----LN--------RHSDQVEKNDSEEEEEEENDTKMAKSSE 266
           GRL L L    LN           D+ ++ D+EEEEEEE + +  +  E
Sbjct: 191 GRLRLCLSQNSLNSQDAEEEFEEEDEDDQYDAEEEEEEEEEEEEEEEEE 210

[Close]

BLAST of Lsi06G006170 vs. NCBI nr
Match: gi|449442619|ref|XP_004139078.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus])

HSP 1 Score: 613.2 bits (1580), Expect = 3.1e-172
Identity = 332/397 (83.63%), Postives = 351/397 (88.41%), Query Frame = 1


Query: 1   MSPLKIFQASSYSNHNKQGIVAVLSSDSEHSQIQPSSLRRTLSADMSSHKWISHMKKVAS 60
           MSPLKIFQAS YSN  KQGIVA LSSDS+HSQIQPSSLRRTLSADMSSHKWISHMKKV+S
Sbjct: 1   MSPLKIFQAS-YSNDKKQGIVAALSSDSDHSQIQPSSLRRTLSADMSSHKWISHMKKVSS 60

Query: 61  FQEFHKPKTEHETEDEHETEGVGVWSSIIKESRQGSKSNSDPYVHPLLKGSGRSLSEKSL 120
           FQ+FH PKTE ETE      GVGVWSSI+KESRQ SK+ SDPYVHPLLK SG+ LSEKSL
Sbjct: 61  FQDFHNPKTEDETE------GVGVWSSIVKESRQESKNISDPYVHPLLKRSGKCLSEKSL 120

Query: 121 EICTESLGSETGSDGFSSYPSSANGDTDDE-EEIILGGTQTFEVENQWKPVKMSYKKSPP 180
           EICTESLGSETGSDGFSSYPSS NGDTDDE EE ++ GTQTFEVENQWKPVK+SYKKSPP
Sbjct: 121 EICTESLGSETGSDGFSSYPSSENGDTDDENEENMIEGTQTFEVENQWKPVKISYKKSPP 180

Query: 181 RRSFPPPLPTLSGPDGESLRMQPRRDNGRLVLEAMSVPSQNNFCAQRQGGRLVLTLLNRH 240
           RRS PPPLPTLSGPDGE+LRMQPRRDNGRLVLEAMSVPSQNNF AQRQ GRLVLTL++RH
Sbjct: 181 RRSLPPPLPTLSGPDGETLRMQPRRDNGRLVLEAMSVPSQNNFHAQRQDGRLVLTLVSRH 240

Query: 241 -SDQVEKND--SEEEEEEENDTKMAKSSEFPSGLVNTHRLASMMNSKTIALANRNPSLPP 300
             +QVEK D    EEE +EN+ K  K SEFP GL+ THRLASMM+SKTIALANRNPSLPP
Sbjct: 241 LINQVEKIDDWKMEEEGKENEQKTTKLSEFPRGLLTTHRLASMMSSKTIALANRNPSLPP 300

Query: 301 RPKAAQPIIGCTAPPVAASLNAYEYYWRSKPMGKAGTAVNPLGQQPASFKSSSRKVMICK 360
           RPKAAQPII C APPVAASLNAYEYYWRSKP GKAGT   P+GQQ A+FKSSSRKVMI K
Sbjct: 301 RPKAAQPIISCVAPPVAASLNAYEYYWRSKPTGKAGT---PVGQQQATFKSSSRKVMISK 360

Query: 361 NRTANEEEKSVVMCSNGSCKEVRRTVVFWEPRCIATS 394
           NRTANEEEK VVMCSNGSCKEVRRTVVFWEPRCIATS
Sbjct: 361 NRTANEEEKLVVMCSNGSCKEVRRTVVFWEPRCIATS 387

[Close]

BLAST of Lsi06G006170 vs. NCBI nr
Match: gi|659098762|ref|XP_008450286.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis melo])

HSP 1 Score: 599.4 bits (1544), Expect = 4.7e-168
Identity = 326/397 (82.12%), Postives = 345/397 (86.90%), Query Frame = 1


Query: 1   MSPLKIFQASSYSNHNKQGIVAVLSSDSEHSQIQPSSLRRTLSADMSSHKWISHMKKVAS 60
           MSPL IFQAS YSN  KQGIVAVLSSDS+HSQIQ SSLRRTLSADMSSHKWIS MKK +S
Sbjct: 1   MSPLMIFQAS-YSNDKKQGIVAVLSSDSDHSQIQTSSLRRTLSADMSSHKWISLMKKTSS 60

Query: 61  FQEFHKPKTEHETEDEHETEGVGVWSSIIKESRQGSKSNSDPYVHPLLKGSGRSLSEKSL 120
           FQ+FH PKTE ETE      GVGVWSSIIKESRQ SK   DPYVHPLLK SG+ LSEKSL
Sbjct: 61  FQDFHNPKTEDETE------GVGVWSSIIKESRQDSKPILDPYVHPLLKRSGKCLSEKSL 120

Query: 121 EICTESLGSETGSDGFSSYPSSANGDTDDE-EEIILGGTQTFEVENQWKPVKMSYKKSPP 180
           EICTESLGSETGSDGFSSYPSS NGDTDDE EE ++  TQTFE+ENQWKPVK+S+KKSPP
Sbjct: 121 EICTESLGSETGSDGFSSYPSSENGDTDDENEENMIESTQTFEMENQWKPVKISHKKSPP 180

Query: 181 RRSFPPPLPTLSGPDGESLRMQPRRDNGRLVLEAMSVPSQNNFCAQRQGGRLVLTLLNRH 240
           RRS PPPLPTLSGPDGE+LRMQPRRDNGRLVLEAMSVPSQNNF AQRQ GRLVLTL+NRH
Sbjct: 181 RRSLPPPLPTLSGPDGETLRMQPRRDNGRLVLEAMSVPSQNNFHAQRQDGRLVLTLINRH 240

Query: 241 -SDQVEKND--SEEEEEEENDTKMAKSSEFPSGLVNTHRLASMMNSKTIALANRNPSLPP 300
             +QVEK D    EEEE+  + K  K SEFP GL+NTHRLASMM+SKTIALANRNPSLPP
Sbjct: 241 LINQVEKIDEWKMEEEEKGKEQKTTKLSEFPRGLLNTHRLASMMSSKTIALANRNPSLPP 300

Query: 301 RPKAAQPIIGCTAPPVAASLNAYEYYWRSKPMGKAGTAVNPLGQQPASFKSSSRKVMICK 360
           RPKA QPIIGC APPV ASLNAYEYYWR+KP GKAGT   PLGQQPA+FKSSSRKVMI K
Sbjct: 301 RPKAGQPIIGCVAPPVVASLNAYEYYWRTKPTGKAGT---PLGQQPATFKSSSRKVMISK 360

Query: 361 NRTANEEEKSVVMCSNGSCKEVRRTVVFWEPRCIATS 394
           NRTANEEEK VV+CSNGSCKEVRRTVVFWEPRCIATS
Sbjct: 361 NRTANEEEKLVVLCSNGSCKEVRRTVVFWEPRCIATS 387

[Close]

BLAST of Lsi06G006170 vs. NCBI nr
Match: gi|449445011|ref|XP_004140267.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus])

HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67
Identity = 187/444 (42.12%), Postives = 250/444 (56.31%), Query Frame = 1


Query: 11  SYSNHNKQGIVAVL-SSDSEHSQIQPSSLRRTLSADMSSHKWISHMKKVASFQEFHKPKT 70
           +Y++  KQGI+ +L SSD  +  + P SLRRTLSADMSS KW S +KK+ S Q FH    
Sbjct: 6   NYNSLQKQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCSPIKKIPSSQAFHDNSN 65

Query: 71  EHETED-EHETEGVGVWSSI-----IKESRQGSKSNSDPYVHPLLKGSGRSLSEKSLEIC 130
            ++ +  +H       WSSI     + +    S   + PYVHPLLK +  SLS+ SL+IC
Sbjct: 66  NNKIDSSKHGVHDSVPWSSILLHNSVSDDPPKSPVVAAPYVHPLLKKTSHSLSDISLQIC 125

Query: 131 TESLGSETGSDGFSSYPSSANGDTDDEEEIILGGTQTFEVEN-QWKPVKMSYKKSPPRRS 190
           TESLGSETGSDGFSSYPSS +GD D     ++  T   E++  +WKPVK S KKSPPR S
Sbjct: 126 TESLGSETGSDGFSSYPSSEDGDFDR----LITETDYSEIDTFEWKPVKFSRKKSPPR-S 185

Query: 191 FPPPLPTLSGPDGESLRMQPRRDNGRLVLEAMSVPSQNNFCAQRQGGRLVLTLLNRHSDQ 250
           FPPP+ +L  PDG S+ +Q RR++GRL+L+A+SVPS+ NF A+R+ GRL+L+L  R  + 
Sbjct: 186 FPPPISSLDSPDGVSICIQSRREDGRLMLDAVSVPSRKNFRAERRDGRLILSLF-RTPEN 245

Query: 251 VEKNDSEEEEE--------------------------EENDTKMAKSSEFPSGLVNTHRL 310
           +  N+ EE EE                          EE +  + K+    S ++N HRL
Sbjct: 246 LLVNEEEELEEMIAGEFEEVKESEIVEVGNDENVLEVEELEIPIEKTPRLSSSVMNFHRL 305

Query: 311 ASMMNSKTIALANRNP------------------SLPPRPKAAQPIIGCTAPPVAASLNA 370
            +MM  KT  L NRNP                  SLPPRP +       TA      LNA
Sbjct: 306 TNMM-KKTNGLINRNPAWPKEKDASETPTTPLSQSLPPRPPS------LTAATAGTFLNA 365

Query: 371 YEYYWRSKPMGKAGTAVNPLGQQPASFKSSSRKVMICKNRTANEEEKSVVMCSN------ 394
           YEYYWRSKP GK+    NP GQQ       +RK++   N+ A+E+++ +V+  N      
Sbjct: 366 YEYYWRSKPTGKSAGIQNPNGQQQTQI---TRKLISSNNQMADEKQQILVLKGNRGDYLV 425

[Close]

BLAST of Lsi06G006170 vs. NCBI nr
Match: gi|659097390|ref|XP_008449599.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 3.0e-66
Identity = 190/460 (41.30%), Postives = 249/460 (54.13%), Query Frame = 1


Query: 11  SYSNHNKQGIVAVL-SSDSEHSQIQPSSLRRTLSADMSSHKWISHMKKVASFQEFHKPKT 70
           SY++  +QGI+ +L SSD  +  + P SLRRTLSADMSS KW S +KK+ S Q FH  K 
Sbjct: 6   SYNSLQQQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCSPIKKIPSSQAFHHNKI 65

Query: 71  E---------HETEDEHETEGVGVWSSII----------KESRQGSKSNSDPYVHPLLKG 130
           E          + +D+ + + V  WSSI+          K S   +     PYVHPLLK 
Sbjct: 66  ECSKQGVVVVDDDDDDDDDDSVS-WSSILLHNSLSDDPPKSSVVAAPPPPPPYVHPLLKK 125

Query: 131 SGRSLSEKSLEICTESLGSETGSDGFSSYPSSANGDTDD--EEEIILGGTQTFEVENQWK 190
           +  SLS+ SL+ICTESLGSETGSDGFSSYPSS +GD D    E        TFE    WK
Sbjct: 126 TSHSLSDISLQICTESLGSETGSDGFSSYPSSEDGDFDGLMTETDCSDDIDTFE----WK 185

Query: 191 PVKMSYKKSPPRRSFPPPLPTLSGPDGESLRMQPRRDNGRLVLEAMSVPSQNNFCAQRQG 250
           PVK S KKSPPR SFPP + +L  PDG S+ +Q RR +GRL+L+A+SVPS+ NF A+R+ 
Sbjct: 186 PVKFSRKKSPPR-SFPPLISSLDSPDGVSIGIQSRRKDGRLILDAVSVPSRKNFRAERRD 245

Query: 251 GRLVLTLLNRHSDQVEKNDSEEE---------------------------EEEENDTKMA 310
           GRL+L+L    ++ + K + EEE                           E EE +  + 
Sbjct: 246 GRLILSLFTTPANLLVKEEEEEELEELIAGEFEEVKESEIVEVGNDENSLEVEELEIPIE 305

Query: 311 KSSEFPSGLVNTHRLASMMNSKTIALANRNP-------------------SLPPRPKAAQ 370
           K+    S ++N HRL +MM  KT  L NRNP                   SLPPRP +  
Sbjct: 306 KTPRLSSSVMNFHRLTNMM-KKTNGLINRNPTWTNEKDGLETPTTTPLSQSLPPRPPS-- 365

Query: 371 PIIGCTAPPVAASLNAYEYYWRSKPMGKAGTAVNPLGQQPASFKSSSRKVMICKNRTANE 394
                TA    + LNAYEYYWRSKP GK+    NP GQQ       +RK++   N+  +E
Sbjct: 366 ----LTAATAGSFLNAYEYYWRSKPTGKSAGIQNPNGQQQTQI---TRKLISSNNQMTDE 425

[Close]

BLAST of Lsi06G006170 vs. NCBI nr
Match: gi|802562391|ref|XP_012066343.1| (PREDICTED: protein FAF-like, chloroplastic [Jatropha curcas])

HSP 1 Score: 256.1 bits (653), Expect = 9.7e-65
Identity = 197/495 (39.80%), Postives = 259/495 (52.32%), Query Frame = 1


Query: 17  KQGIVAVLSSDSEHSQIQPSSLRRTLSADMSSHKWI------SHMKKVASFQEFH----- 76
           +QGIV++L SDSE    +P  LRRTLSADMSS KW+      S +KK+AS +EF      
Sbjct: 23  QQGIVSILGSDSELKTNKP--LRRTLSADMSSKKWLSQNGFSSRLKKIASSKEFSVSIIT 82

Query: 77  KPKTEHETEDEHETE--------------------GVGVWSSIIKESRQGSKS-NSDPYV 136
              +    EDE+E E                       +WSSI+ +  Q +K+    PYV
Sbjct: 83  DSSSSEGDEDEYEKETEVWSSIQQEKQKKDSSPRGQFDIWSSILTQKAQEAKNLLPPPYV 142

Query: 137 HPLLKGSGRSLSEKSLEICTESLGSETGSDGFSSYPSSANGDTDDEEEIILGGTQTFEVE 196
           HPL+K S  SLSEKSLEICTESLGSETGSDGFSSYP S  GD ++++E      +  E E
Sbjct: 143 HPLVKRSASSLSEKSLEICTESLGSETGSDGFSSYPPSETGDAEEDKEEEQQEEEEEEEE 202

Query: 197 NQ-----------WKPVKMSY----KKSPPRRSFPPPLPTLSGPDGESLRMQPRRDNGRL 256
            +           W+ +K +     KK PP R+FPPP+P+LS  DG SLRM+PRRDNGR 
Sbjct: 203 EEEKVSKNYDMEDWQVIKCNITAASKKLPP-RTFPPPIPSLSSRDGASLRMRPRRDNGRF 262

Query: 257 VLEAMSVPSQNNFCAQRQGGRLVLTLLNRHSD-------------QVEKNDSEEEEEEEN 316
           VLEA+SVPSQNNF A+RQ GRLVL+ ++                 QVE  DSEEEEEE N
Sbjct: 263 VLEAISVPSQNNFKAERQDGRLVLSFIDTPDGEEEGTKKNEMELFQVEIEDSEEEEEEVN 322

Query: 317 DT------------KMAKSSEFPSGLVNTHRLASMMNSKTIALANRN------------- 376
           +              M ++ +   G++N HRLA M+N  T+ LANRN             
Sbjct: 323 ERGGGGGGGEEMRYVMEQAPKLSGGIINVHRLALMINKPTM-LANRNTAWSNKFNEVVKF 382

Query: 377 -------------------PSLPPRPKAAQ--PIIGCTAPPVAASLNAYEYYWRSKPMGK 394
                               SLPPRP   +  P     A    AS+NAYEYYW+ KPMG 
Sbjct: 383 EEEEEEEEEVNPNPIAPLTQSLPPRPPVGRSIPKPAAVATAATASVNAYEYYWKPKPMGT 442

The following BLAST results are available for this feature:

BLAST of Lsi06G006170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAFL_ARATH	1.5e-44	35.08	Protein FAF-like, chloroplastic OS=Arabidopsis thaliana GN=At5g22090 PE=2 SV=1	[more]
FAF3_ARATH	1.6e-11	35.48	Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana GN=FAF3 PE=2 SV=1	[more]
FAF4_ARATH	1.8e-10	35.20	Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana GN=FAF4 PE=2 SV=1	[more]
FAF2_ARATH	4.9e-08	35.39	Protein FANTASTIC FOUR 2 OS=Arabidopsis thaliana GN=FAF2 PE=2 SV=1	[more]
FAF1_ARATH	4.1e-07	30.13	Protein FANTASTIC FOUR 1 OS=Arabidopsis thaliana GN=FAF1 PE=2 SV=1	[more]

BLAST of Lsi06G006170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0D7_CUCSA	2.2e-172	83.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G635920 PE=4 SV=1	[more]
A0A0A0KI67_CUCSA	1.1e-67	42.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G426380 PE=4 SV=1	[more]
A0A067LEM2_JATCU	6.7e-65	39.80	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23902 PE=4 SV=1	[more]
A0A0D2RWI8_GOSRA	1.2e-64	40.73	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G082500 PE=4 SV=1	[more]
A0A0B0PRI4_GOSAR	9.7e-64	40.65	Uncharacterized protein OS=Gossypium arboreum GN=F383_03861 PE=4 SV=1	[more]

BLAST of Lsi06G006170 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22090.1	8.2e-46	35.08	Protein of unknown function (DUF3049)	[more]
AT5G19260.1	9.1e-13	35.48	Protein of unknown function (DUF3049)	[more]
AT3G06020.1	1.0e-11	35.20	Protein of unknown function (DUF3049)	[more]
AT1G03170.1	2.7e-09	35.39	Protein of unknown function (DUF3049)	[more]
AT4G02810.1	2.3e-08	30.13	Protein of unknown function (DUF3049)	[more]

BLAST of Lsi06G006170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442619\|ref\|XP_004139078.1\|	3.1e-172	83.63	PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus]	[more]
gi\|659098762\|ref\|XP_008450286.1\|	4.7e-168	82.12	PREDICTED: protein FAF-like, chloroplastic [Cucumis melo]	[more]
gi\|449445011\|ref\|XP_004140267.1\|	1.6e-67	42.12	PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus]	[more]
gi\|659097390\|ref\|XP_008449599.1\|	3.0e-66	41.30	PREDICTED: protein FAF-like, chloroplastic [Cucumis melo]	[more]
gi\|802562391\|ref\|XP_012066343.1\|	9.7e-65	39.80	PREDICTED: protein FAF-like, chloroplastic [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G006170.1	Lsi06G006170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 182..235 score: 7.7
None	No IPR available	unknown	Coil	Coil	coord: 236..256 scor
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 16..257 score: 3.7
None	No IPR available	PANTHER	PTHR33155:SF3	PROTEIN FAF-LIKE, CHLOROPLASTIC-RELATED	coord: 16..257 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G006170	Csa1G635920	Cucumber (Chinese Long) v2	culsiB077
Lsi06G006170	CSPI01G31490	Wild cucumber (PI 183967)	cpilsiB077
Lsi06G006170	Cucsa.355960	Cucumber (Gy14) v1	cgylsiB574
Lsi06G006170	CmoCh11G009230	Cucurbita moschata (Rifu)	cmolsiB135
Lsi06G006170	Cla007326	Watermelon (97103) v1	lsiwmB397
Lsi06G006170	MELO3C015055	Melon (DHL92) v3.5.1	lsimeB406
Lsi06G006170	ClCG03G012250	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G006170	MELO3C015055.2	Melon (DHL92) v3.6.1	lsimedB428
Lsi06G006170	Cla97C03G062580	Watermelon (97103) v2	lsiwmbB365
Lsi06G006170	Bhi02G001184	Wax gourd	lsiwgoB509
Lsi06G006170	Cp4.1LG04g12540	Cucurbita pepo (Zucchini)	cpelsiB562
Lsi06G006170	CsGy1G030660	Cucumber (Gy14) v2	cgyblsiB072
Lsi06G006170	Carg22692	Silver-seed gourd	carlsiB486
Lsi06G006170	CsaV3_1G043850	Cucumber (Chinese Long) v3	cuclsiB087

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G006170	Cucumber (Gy14) v1	cgylsiB573
Lsi06G006170	Cucurbita maxima (Rimu)	cmalsiB067
Lsi06G006170	Cucurbita maxima (Rimu)	cmalsiB073
Lsi06G006170	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G006170	Cucurbita moschata (Rifu)	cmolsiB054
Lsi06G006170	Cucurbita moschata (Rifu)	cmolsiB059
Lsi06G006170	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G006170	Cucurbita pepo (Zucchini)	cpelsiB017
Lsi06G006170	Cucurbita pepo (Zucchini)	cpelsiB299
Lsi06G006170	Cucurbita pepo (Zucchini)	cpelsiB309
Lsi06G006170	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G006170	Cucumber (Chinese Long) v2	culsiB058
Lsi06G006170	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G006170	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G006170	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G006170	Silver-seed gourd	carlsiB886
Lsi06G006170	Cucumber (Chinese Long) v3	cuclsiB068