Lsi06G007340 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCTCTCTTCCCATCTTGAGTTCGTGAATACAACTTTAGCTCTTCTTTGTACTTATCAATGGCTCCTCTTTTGCTTCTTCAAGGTGAAAAACTACGACAACTCGCAAGAGTAATCCGCAACCAAGAGATCGAGTCGGTGAAGAATATCCAATTCAAATCCGAACAAGAACAAGCCAAATATCTGAGGGATGTGGGAGATAATTACCACTCAGCATTGAAGCTTTTGGATGATGCAGATAGCGTGAAGCAAACATTCAAAGACGACGAAACCAAATCTTCAATTGCTCATGAAACGTATTCTTATGTGGAAAAAGCTGTTAACATCTCGCTTCAAGCAGTGAGGAACTATACACTTCGAACAAATTATCTAACAAAGATTGGTGCACACTCAAAAGACATTTTTGAAACATTAAAAACCTTAGATCCAAACAATGTGACCAATGTGGCTCGTTTAGCTAAGGAGGCTAATCAATACAATGAGAGTATGCAACAAGTCATGATGAAGCATCAGAGTCCAGCTTCACGCAACTTCTCTAAATGGCTTAAGGATAGTGGAACTAAGTTTGAGGATCTTGTCACAAGGTAAACTTAATTACTTAATAACACACTTTCCATCAAATATATATATATATATATATACTCCCTTCTTTTCTAACATCAACTTATATACATGTTATTTTGGTGCAAAGGATAAGAAAAAATTGATCTCTCTTTTGGTTTTTTAAATTTAAATATGGATTGGTTGTTAGTTTTGTATTGATTTCGGCAAAAATTGATTTGAATCTCTTTACATCACATCTCAAAAAATATTTTCAGCTCAGCAATTTTGTGGATCGTTGGTAGTCAACGAGTGTTTATTCTTGCACATCCTAGCTTCAAATAATCATGCCATTGCATTTTTTTTTTTTTTTTTTTTTTATGGAAAATTTATACGTACGTATATTATTTTAATTTTAGGACACTAAAAATTGGTTAAATTTTAGGAAAATTTTTCAAAATAAAAAAATAAAGGAACTATTTTCACAGAATAGCCAATTTTTTAGATAGTTGTGATAGACGCTAATAGAAGTCTATCATAGTCTATCTGTTTATTAGTGATAGAAATGATATAAATTTGTTAGATGCCGATAGAAGTCTATTAGTATTTTTTTTTTTGCAATTTTTTTTTTATAAATAATTTTACATTTTTCGTGGAAAGTTCCTTTTTTTTTAATTAATATTTTTAAAGTGGTCATCCCAACAAACTCCCTAACATTTCCAATGTGGACACATTAATTAGGTACCAAAATAAGCGTGGATTCAAGGGGCTATTCAAGAATTTGAAGGACGAAGAAAAGCTGCTGGTAAATATCCTGTAATAAATTATAGTATTTAGCATCAATTTGTTTTCATTTAGAGGTTGTCAGATAATTTGTTCTTATTTTCCTTTTCTCCATTCTTATTTTGGTTTTCAATTTTTAAGAAACAGTTGTTTTTGGAAAAAAAAAAAATAATAAAAAGTTGTATAATTTTTTTTGACATCAAAGGAATTGGGCTTTTAGAATGTCGAAGATGAAACATAAAAAAAAAAAAAAAAAAAAGACTTATTTTTAAAATTAAATACTTGAAAAGTTAATCCAAACAAGACCGAAGTTTGAAAAAATGTCAACAAAAACCTCATCCAACCTATACATATTCTTGATGTTACAATATAATCTTGGTCCCTATACTTTGAAGTCTATTTAATTTTAATTCTTGTACTTTCAAATATCTAATTTTAATTTAGTCTCTATACTTTCAAGAAATTATTTAGTCCACACGGCTCGTTTTGATTTTTTCAAAAACTTTTTGTTATTTATTACCATTTCTACTTTAAATTTTAAAAACATATTCACATATTATATTTTTTTTTTTTTTGCATGAAAATTATTATTATTATTTAGCCAATTTTTATTAAAAAAAATTTTGAGAGCCTAAATTTATGATTTATTAAAAGTACACGTATTAAAATTGGACATTTAAAAGTATATAAACTAAAATGGAACAAATTCAAAGTAGTATTTAAAAAAAAAAAATTTAGTATCAATGGATTCCAATTTCTTACGCTATTTGGTATTTTTATTGAAAGTATAGGACGAAAACCTGACATTTTCACATCATCGTGTACTAAAAAATGGTAATTTAACTAAAAATAAAATAAAATTACATATTAATTTTGTAGATTTCATACTTTTATAAAAGTGATTTATGAAGTAAAAATTTCATTTTCCTAATTTAAATATATATTAGAAAGACAATAAAATTATATGATCACAAATTGGGATAATATAGGTGTATAACGACATCATTGAGGCTTCTGGGCGAGGAAGTGTGATAGCAGACACCTTGTCAACTATCTCTGGTGTAGCAGGCATTCTGTTTCTCATCCTTGCCACTGGAATAATGGTATGGGACATCTTTACATCCGAACATGTTCTCCAAACAGCCACAAAAGATGTGATGGTGACTGCTGCGGCAGTGGGTGGGGCAATGGTTGGACAAGTTGTTGGAGCCGCCTTGCCAACCTTAATTGGCGTCGAAGCTTCTGCTTTGTTTTTGATGGCCACTGCAGTTATAGGAAGCATTGTGGGAGCCTTTGTGCTTGGTGCCTTTGTTGGTTGGTTGGTCGATCTTATCTTTAGTTCTGGAGGCGATTACCCTCTCAGCACTGATGGCCACACTTGCTATGTCGCTCCATTGCCTGATGGTGAGGCTGTCGCACGTCAAATTGCTCACCAGTAGAACTTTAATTTAAGGCTTTTGTTGCATGAATCTCTAAGTGAAATAAGTTGAAAACAAATACTCCTTGGAAGTCTATATGAATAACTATGATGCATAAATAACCATGTTTGGAACTTGTTGGTTCTATGGAGAGATCATGTAAATCTACTAATATATAAATAATTATAATCGTTTATCCTTGTTTGGAACTTGGTTTTAGAAGTTCTATTTAAG CCTCTCTCTTCCCATCTTGAGTTCGTGAATACAACTTTAGCTCTTCTTTGTACTTATCAATGGCTCCTCTTTTGCTTCTTCAAGGTGAAAAACTACGACAACTCGCAAGAGTAATCCGCAACCAAGAGATCGAGTCGGTGAAGAATATCCAATTCAAATCCGAACAAGAACAAGCCAAATATCTGAGGGATGTGGGAGATAATTACCACTCAGCATTGAAGCTTTTGGATGATGCAGATAGCGTGAAGCAAACATTCAAAGACGACGAAACCAAATCTTCAATTGCTCATGAAACGTATTCTTATGTGGAAAAAGCTGTTAACATCTCGCTTCAAGCAGTGAGGAACTATACACTTCGAACAAATTATCTAACAAAGATTGGTGCACACTCAAAAGACATTTTTGAAACATTAAAAACCTTAGATCCAAACAATGTGACCAATGTGGCTCGTTTAGCTAAGGAGGCTAATCAATACAATGAGAGTATGCAACAAGTCATGATGAAGCATCAGAGTCCAGCTTCACGCAACTTCTCTAAATGGCTTAAGGATAGTGGAACTAAGTTTGAGGATCTTGTCACAAGGTACCAAAATAAGCGTGGATTCAAGGGGCTATTCAAGAATTTGAAGGACGAAGAAAAGCTGCTGGTGTATAACGACATCATTGAGGCTTCTGGGCGAGGAAGTGTGATAGCAGACACCTTGTCAACTATCTCTGGTGTAGCAGGCATTCTGTTTCTCATCCTTGCCACTGGAATAATGGTATGGGACATCTTTACATCCGAACATGTTCTCCAAACAGCCACAAAAGATGTGATGGTGACTGCTGCGGCAGTGGGTGGGGCAATGGTTGGACAAGTTGTTGGAGCCGCCTTGCCAACCTTAATTGGCGTCGAAGCTTCTGCTTTGTTTTTGATGGCCACTGCAGTTATAGGAAGCATTGTGGGAGCCTTTGTGCTTGGTGCCTTTGTTGGTTGGTTGGTCGATCTTATCTTTAGTTCTGGAGGCGATTACCCTCTCAGCACTGATGGCCACACTTGCTATGTCGCTCCATTGCCTGATGGTGAGGCTGTCGCACGTCAAATTGCTCACCAGTAGAACTTTAATTTAAGGCTTTTGTTGCATGAATCTCTAAGTGAAATAAGTTGAAAACAAATACTCCTTGGAAGTCTATATGAATAACTATGATGCATAAATAACCATGTTTGGAACTTGTTGGTTCTATGGAGAGATCATGTAAATCTACTAATATATAAATAATTATAATCGTTTATCCTTGTTTGGAACTTGGTTTTAGAAGTTCTATTTAAG ATGGCTCCTCTTTTGCTTCTTCAAGGTGAAAAACTACGACAACTCGCAAGAGTAATCCGCAACCAAGAGATCGAGTCGGTGAAGAATATCCAATTCAAATCCGAACAAGAACAAGCCAAATATCTGAGGGATGTGGGAGATAATTACCACTCAGCATTGAAGCTTTTGGATGATGCAGATAGCGTGAAGCAAACATTCAAAGACGACGAAACCAAATCTTCAATTGCTCATGAAACGTATTCTTATGTGGAAAAAGCTGTTAACATCTCGCTTCAAGCAGTGAGGAACTATACACTTCGAACAAATTATCTAACAAAGATTGGTGCACACTCAAAAGACATTTTTGAAACATTAAAAACCTTAGATCCAAACAATGTGACCAATGTGGCTCGTTTAGCTAAGGAGGCTAATCAATACAATGAGAGTATGCAACAAGTCATGATGAAGCATCAGAGTCCAGCTTCACGCAACTTCTCTAAATGGCTTAAGGATAGTGGAACTAAGTTTGAGGATCTTGTCACAAGGTACCAAAATAAGCGTGGATTCAAGGGGCTATTCAAGAATTTGAAGGACGAAGAAAAGCTGCTGGTGTATAACGACATCATTGAGGCTTCTGGGCGAGGAAGTGTGATAGCAGACACCTTGTCAACTATCTCTGGTGTAGCAGGCATTCTGTTTCTCATCCTTGCCACTGGAATAATGGTATGGGACATCTTTACATCCGAACATGTTCTCCAAACAGCCACAAAAGATGTGATGGTGACTGCTGCGGCAGTGGGTGGGGCAATGGTTGGACAAGTTGTTGGAGCCGCCTTGCCAACCTTAATTGGCGTCGAAGCTTCTGCTTTGTTTTTGATGGCCACTGCAGTTATAGGAAGCATTGTGGGAGCCTTTGTGCTTGGTGCCTTTGTTGGTTGGTTGGTCGATCTTATCTTTAGTTCTGGAGGCGATTACCCTCTCAGCACTGATGGCCACACTTGCTATGTCGCTCCATTGCCTGATGGTGAGGCTGTCGCACGTCAAATTGCTCACCAGTAG MAPLLLLQGEKLRQLARVIRNQEIESVKNIQFKSEQEQAKYLRDVGDNYHSALKLLDDADSVKQTFKDDETKSSIAHETYSYVEKAVNISLQAVRNYTLRTNYLTKIGAHSKDIFETLKTLDPNNVTNVARLAKEANQYNESMQQVMMKHQSPASRNFSKWLKDSGTKFEDLVTRYQNKRGFKGLFKNLKDEEKLLVYNDIIEASGRGSVIADTLSTISGVAGILFLILATGIMVWDIFTSEHVLQTATKDVMVTAAAVGGAMVGQVVGAALPTLIGVEASALFLMATAVIGSIVGAFVLGAFVGWLVDLIFSSGGDYPLSTDGHTCYVAPLPDGEAVARQIAHQ
BLAST of Lsi06G007340 vs. TrEMBL
Match: A0A0A0M0G8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G650630 PE=4 SV=1) HSP 1 Score: 572.4 bits (1474), Expect = 3.7e-160 Identity = 298/345 (86.38%), Postives = 319/345 (92.46%), Query Frame = 1
BLAST of Lsi06G007340 vs. TrEMBL
Match: F2CUN9_HORVD (Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 3.9e-48 Identity = 136/349 (38.97%), Postives = 189/349 (54.15%), Query Frame = 1
BLAST of Lsi06G007340 vs. TrEMBL
Match: Q43490_HORVU (Jasmonate induced protein OS=Hordeum vulgare GN=JIP37 PE=2 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 8.0e-46 Identity = 135/349 (38.68%), Postives = 187/349 (53.58%), Query Frame = 1
BLAST of Lsi06G007340 vs. TrEMBL
Match: C5X8T4_SORBI (Putative uncharacterized protein Sb02g002280 OS=Sorghum bicolor GN=Sb02g002280 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 3.1e-45 Identity = 135/349 (38.68%), Postives = 186/349 (53.30%), Query Frame = 1
BLAST of Lsi06G007340 vs. TrEMBL
Match: W5DD94_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 6.8e-45 Identity = 129/340 (37.94%), Postives = 180/340 (52.94%), Query Frame = 1
BLAST of Lsi06G007340 vs. NCBI nr
Match: gi|659085855|ref|XP_008443644.1| (PREDICTED: uncharacterized protein LOC103487192 [Cucumis melo]) HSP 1 Score: 576.2 bits (1484), Expect = 3.7e-161 Identity = 299/345 (86.67%), Postives = 322/345 (93.33%), Query Frame = 1
BLAST of Lsi06G007340 vs. NCBI nr
Match: gi|449442773|ref|XP_004139155.1| (PREDICTED: uncharacterized protein LOC101203466 [Cucumis sativus]) HSP 1 Score: 572.4 bits (1474), Expect = 5.4e-160 Identity = 298/345 (86.38%), Postives = 319/345 (92.46%), Query Frame = 1
BLAST of Lsi06G007340 vs. NCBI nr
Match: gi|694407169|ref|XP_009378339.1| (PREDICTED: uncharacterized protein LOC103966850 [Pyrus x bretschneideri]) HSP 1 Score: 283.9 bits (725), Expect = 3.8e-73 Identity = 158/338 (46.75%), Postives = 228/338 (67.46%), Query Frame = 1
BLAST of Lsi06G007340 vs. NCBI nr
Match: gi|657954699|ref|XP_008368796.1| (PREDICTED: uncharacterized protein LOC103432385 [Malus domestica]) HSP 1 Score: 282.7 bits (722), Expect = 8.5e-73 Identity = 157/344 (45.64%), Postives = 226/344 (65.70%), Query Frame = 1
BLAST of Lsi06G007340 vs. NCBI nr
Match: gi|657999600|ref|XP_008392236.1| (PREDICTED: uncharacterized protein LOC103454422 [Malus domestica]) HSP 1 Score: 279.6 bits (714), Expect = 7.2e-72 Identity = 155/341 (45.45%), Postives = 229/341 (67.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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