Lsi06G007350 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGAAGATGGCATACAATGTCTTTGGCAATCCGATCACCAACCAAACTTTGGAGGCTATGCCTGAATATGAAGGGAAGAAAATAACACGTCGAGATAGAGCACATGTGGCACTTAATATGAAGAATGCTGAAGACAAGGACAAAAATGCTCGAGAATATGTAGAAAATTTGAAAAAACGATGGGGAACTGGAGTCTCTACCCTTTGCTTACTTTATAATGCCACTGGCGATACCATAACATATGTTTGTGAACACAATTGGCATGGTCACATCGGACCTGGTCCTTACCCAATCGAGATAGCAAATGGTCAATGGGGCGGTTTTCTTCATGTTAAAACCTCTGGAGCTGCCACTGGCTCTTCTGCTGCTGTGGTATATCGTGGTCTAAATCCTTATGATGCACGTTGTGATTGGATGGCAGCTTGGTCCAATCCATGGGATCATTCGTCTTCGAATAATACGGTTATGATTTTTTTTCTAACATATGCTTATAGTGTTTCAATTTTATTTATTTATTTACTTTTGTCTAAAATACATCTAAATCTTTGAACATTCAATTTTATATAGGCGTACACTGAGATACGTGAAGAGGGACATTATGATAAGCACGATAACTGGAATTACATCTCTAAATTATTATACAGTTCGGGTCTTAGCAAATCAGACAATTGGAACGGATGTCTATCGACCGTGATAACAGGAAGTGACACCAGTCCCGTATATGAAGGAATATTCACTCTCGTGGGTGCCTAAGCCTCTCTTAATGCACACCTTTAAATAAATATAATTGCCTTTGTATCATGTATTTCTAAAGGCAACTACCTTTAAATAGTTAGTGTTCTAAAAAAAGGTATGTACTATGCTGCATCCAATTACCTCTAAATAAAGGTCACTTGAGCCTCTGTGTACTATGCTACATCCAATTACCTTTAGATAATGGCGGACTTGAGCCTATGTGTATTATGCTACATCCAATTACCTCTAAATAATG TTTGAAGATGGCATACAATGTCTTTGGCAATCCGATCACCAACCAAACTTTGGAGGCTATGCCTGAATATGAAGGGAAGAAAATAACACGTCGAGATAGAGCACATGTGGCACTTAATATGAAGAATGCTGAAGACAAGGACAAAAATGCTCGAGAATATGTAGAAAATTTGAAAAAACGATGGGGAACTGGAGTCTCTACCCTTTGCTTACTTTATAATGCCACTGGCGATACCATAACATATGTTTGTGAACACAATTGGCATGGTCACATCGGACCTGGTCCTTACCCAATCGAGATAGCAAATGGTCAATGGGGCGGTTTTCTTCATGTTAAAACCTCTGGAGCTGCCACTGGCTCTTCTGCTGCTGTGGTATATCGTGGTCTAAATCCTTATGATGCACGTTGTGATTGGATGGCAGCTTGGTCCAATCCATGGGATCATTCGTCTTCGAATAATACGGCGTACACTGAGATACGTGAAGAGGGACATTATGATAAGCACGATAACTGGAATTACATCTCTAAATTATTATACAGTTCGGGTCTTAGCAAATCAGACAATTGGAACGGATGTCTATCGACCGTGATAACAGGAAGTGACACCAGTCCCGTATATGAAGGAATATTCACTCTCGTGGGTGCCTAAGCCTCTCTTAATGCACACCTTTAAATAAATATAATTGCCTTTGTATCATGTATTTCTAAAGGCAACTACCTTTAAATAGTTAGTGTTCTAAAAAAAGGTATGTACTATGCTGCATCCAATTACCTCTAAATAAAGGTCACTTGAGCCTCTGTGTACTATGCTACATCCAATTACCTTTAGATAATGGCGGACTTGAGCCTATGTGTATTATGCTACATCCAATTACCTCTAAATAATG ATGGCATACAATGTCTTTGGCAATCCGATCACCAACCAAACTTTGGAGGCTATGCCTGAATATGAAGGGAAGAAAATAACACGTCGAGATAGAGCACATGTGGCACTTAATATGAAGAATGCTGAAGACAAGGACAAAAATGCTCGAGAATATGTAGAAAATTTGAAAAAACGATGGGGAACTGGAGTCTCTACCCTTTGCTTACTTTATAATGCCACTGGCGATACCATAACATATGTTTGTGAACACAATTGGCATGGTCACATCGGACCTGGTCCTTACCCAATCGAGATAGCAAATGGTCAATGGGGCGGTTTTCTTCATGTTAAAACCTCTGGAGCTGCCACTGGCTCTTCTGCTGCTGTGGTATATCGTGGTCTAAATCCTTATGATGCACGTTGTGATTGGATGGCAGCTTGGTCCAATCCATGGGATCATTCGTCTTCGAATAATACGGCGTACACTGAGATACGTGAAGAGGGACATTATGATAAGCACGATAACTGGAATTACATCTCTAAATTATTATACAGTTCGGGTCTTAGCAAATCAGACAATTGGAACGGATGTCTATCGACCGTGATAACAGGAAGTGACACCAGTCCCGTATATGAAGGAATATTCACTCTCGTGGGTGCCTAA MAYNVFGNPITNQTLEAMPEYEGKKITRRDRAHVALNMKNAEDKDKNAREYVENLKKRWGTGVSTLCLLYNATGDTITYVCEHNWHGHIGPGPYPIEIANGQWGGFLHVKTSGAATGSSAAVVYRGLNPYDARCDWMAAWSNPWDHSSSNNTAYTEIREEGHYDKHDNWNYISKLLYSSGLSKSDNWNGCLSTVITGSDTSPVYEGIFTLVGA
BLAST of Lsi06G007350 vs. Swiss-Prot
Match: JI23_HORVU (23 kDa jasmonate-induced protein OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.3e-44 Identity = 98/210 (46.67%), Postives = 134/210 (63.81%), Query Frame = 1
BLAST of Lsi06G007350 vs. TrEMBL
Match: A0A097BU21_CITLA (23 kDa jasmonate-induced protein OS=Citrullus lanatus PE=2 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 2.1e-100 Identity = 174/213 (81.69%), Postives = 189/213 (88.73%), Query Frame = 1
BLAST of Lsi06G007350 vs. TrEMBL
Match: A0A0A0M0F4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G642550 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.4e-77 Identity = 141/211 (66.82%), Postives = 168/211 (79.62%), Query Frame = 1
BLAST of Lsi06G007350 vs. TrEMBL
Match: M5XVI7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022968mg PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.8e-51 Identity = 108/186 (58.06%), Postives = 128/186 (68.82%), Query Frame = 1
BLAST of Lsi06G007350 vs. TrEMBL
Match: M5X699_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020548mg PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 5.1e-51 Identity = 114/215 (53.02%), Postives = 133/215 (61.86%), Query Frame = 1
BLAST of Lsi06G007350 vs. TrEMBL
Match: M0T1C5_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.6e-44 Identity = 98/209 (46.89%), Postives = 131/209 (62.68%), Query Frame = 1
BLAST of Lsi06G007350 vs. NCBI nr
Match: gi|694188379|gb|AIS71930.1| (23 kDa jasmonate-induced protein [Citrullus lanatus]) HSP 1 Score: 373.2 bits (957), Expect = 2.9e-100 Identity = 174/213 (81.69%), Postives = 189/213 (88.73%), Query Frame = 1
BLAST of Lsi06G007350 vs. NCBI nr
Match: gi|659086035|ref|XP_008443732.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo]) HSP 1 Score: 314.3 bits (804), Expect = 1.6e-82 Identity = 144/210 (68.57%), Postives = 172/210 (81.90%), Query Frame = 1
BLAST of Lsi06G007350 vs. NCBI nr
Match: gi|700211516|gb|KGN66612.1| (hypothetical protein Csa_1G642550 [Cucumis sativus]) HSP 1 Score: 297.4 bits (760), Expect = 2.1e-77 Identity = 141/211 (66.82%), Postives = 168/211 (79.62%), Query Frame = 1
BLAST of Lsi06G007350 vs. NCBI nr
Match: gi|1009157728|ref|XP_015896910.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Ziziphus jujuba]) HSP 1 Score: 290.4 bits (742), Expect = 2.5e-75 Identity = 142/213 (66.67%), Postives = 163/213 (76.53%), Query Frame = 1
BLAST of Lsi06G007350 vs. NCBI nr
Match: gi|743780066|ref|XP_010920410.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Elaeis guineensis]) HSP 1 Score: 285.0 bits (728), Expect = 1.1e-73 Identity = 136/214 (63.55%), Postives = 162/214 (75.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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