Lsi07G003550 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGGAAAGAAACCAAAGTTGCCGGCAATGGAGGGTTGGAGGGTTTTCAAGTTGCCGGCGTGGAGAGTCTTCAAATCGCTGGTGGTGGGTGGTCTTCAAGTCGTTGGCGTCTGATGAAGGAGGAAAAATCGTGGGTGGGTGGGCGTGGGAGACTCTCCAGCAAGTGTGTAAGTTAGTAACTGTGTGACAAGTTGCAGCTCCCGTGTCCTAGGGGTGTCCTAGAGGTGCCTTGTCGTGTCCGTAAGGTGTCTCGCCGTGTCGAAAATAAAAAATAATAATGAATTAATGGACACGCCAGCTGGCATGTCGGACATGTGTCGGTGTTGGACACGTGTCCGATCGACCAACACTGACACCTCGCCATTTTAGAAGTGTCGGTGCTTTATAGCTCTCACATTTTTACTTCTTTCAAAATTTTCTGAAAAGTCCAAACCTAATTAGAGCAAAAGCTTTGTGAGCTGCAAATGGATTTATTAAACAGGTCTCAGAGATTTCGTTTATAAGAGTCTGAATGATTTCTGTCCAATCATCAAAAGGATGTAATCTTGTGATAACAAGAATTTCAAAAAAAATCCAAATTTCCCACCTCCTTTACTCTCTTTATCCGAAGAAACTTCAGCTGCAATAAAACTTGTTGAGGCAAGAAGGTGCCCTCAGATTCTTGTTAACGAAGAATTCTTAAAAAATCCTTTCCTTGGGCGTACAAAGATCTATTCCACTTATAGGCTTTTTATGAAAAAATTCGTTCAACATTTTCCAAAAGACCCTCCACCCTGTTTCTTGAAATCGACCAAAATGGAGTTCATGGCACCACCATTATATTGGAAAGAAATCTCAATGAACCAACCAGAATGGTTAGAACTTTAAGGATTCTAAAACAGATTTTCTACAAGCATCAGCATGCTTAACTCGATTCCAAAGCGAGGCAAGGGATTGTTCCAAGCATGAACATATTTCCTTTTCTTCTAGAAGATAAGCTCTATGAGCATAAGAAACAAACAAAGAAGGAAAGTCATCATGGGTTGGCTTAGTGATAAAAAAAAGGAGACGTAGTCTCAATAAATGGTTAGGAGGTCATGTGTTCAATCCATAATGATCACCTAGGAATTAATATCCTACGAGTTTCCTACCCAAATGTTGTAGGGTCACAGGTGGGTTGTCCCGTGAGATTTGAGGTGCGCGCGTAAGCTAGCCCGGACACTCATGGATATAAAAAAAATAAACAAACAAAGAAGGGATTGTTGGCAATGCTACAAGTGCTTTCCATCCAACTCAATGACAAACTCTAAACGAAAGCAAAAACGAACCAACCAAGGCAAAATGCTCATCTTAGATGAAGATTCCAACGAAGAAGAACCGGTTGAAGGGTAATAAAAGCTTGCTTTAATGCAAAATATGAGAAAAAAATCCGGTTGAAAGCTTGGGAAAGAACAAAAGGGAAGAAGAAAAGATTAAACATTGTGATTTGAATAAAGACACAAGTCATAGTTTGATTTGATAATCTAAATAAATGCAATTCTTTTTTGAATTTTCAGATTCCTCTTGATCGATATTTACCAACATGGAGAGGGAATGTAATAGATTCAGAGTTGGAAATGAACCCATCTCGTATTGTTGGGTTGTCTTTATCAGTTAATGCTGCTGCTGGCGTTCCTGGTGCTACATCCGGCCCTGGTGACTTTAAACTGGAAATTGATTGGATCAAAGCCTTGAGAACTCAGTGAGTCAGTTTTGGTTTCGTTACATATTGGGAATACTTAATTATGATCAAATTTTAATTTCCAACCCCAATAAAATGCAATTTTTGTACCAAATTATGATCAAAACTTTTGTTGTTTGAAGAACGTAGTTTAGAATATACAAACACATCTCATTTTGATCTTTAGACATTGAAGGTGACATGTTACGAGAGAAGGGAAGATTAAAAGATGGCTTACTAT ATGGGAGGGAAAGAAACCAAAGTTGCCGGCAATGGAGGGTTGGAGGGTTTTCAAGTTGCCGGCGTGGAGAGTCTTCAAATCGCTGGTGGTGGGTGGTCTTCAAGTCGTTGGCGTCTGATGAAGGAGGAAAAATCGTGGGTGGGTGGGCGTGGGAGACTCTCCAGCAAGTGTATTCCTCTTGATCGATATTTACCAACATGGAGAGGGAATGTAATAGATTCAGAGTTGGAAATGAACCCATCTCGTATTGTTGGGTTGTCTTTATCAGTTAATGCTGCTGCTGGCGTTCCTGGTGCTACATCCGGCCCTGGTGACTTTAAACTGGAAATTGATTGGATCAAAGCCTTGAGAACTCAGTGAGTCAGTTTTGGTTTCGTTACATATTGGGAATACTTAATTATGATCAAATTTTAATTTCCAACCCCAATAAAATGCAATTTTTGTACCAAATTATGATCAAAACTTTTGTTGTTTGAAGAACGTAGTTTAGAATATACAAACACATCTCATTTTGATCTTTAGACATTGAAGGTGACATGTTACGAGAGAAGGGAAGATTAAAAGATGGCTTACTAT ATGGGAGGGAAAGAAACCAAAGTTGCCGGCAATGGAGGGTTGGAGGGTTTTCAAGTTGCCGGCGTGGAGAGTCTTCAAATCGCTGGTGGTGGGTGGTCTTCAAGTCGTTGGCGTCTGATGAAGGAGGAAAAATCGTGGGTGGGTGGGCGTGGGAGACTCTCCAGCAAGTGTATTCCTCTTGATCGATATTTACCAACATGGAGAGGGAATGTAATAGATTCAGAGTTGGAAATGAACCCATCTCGTATTGTTGGGTTGTCTTTATCAGTTAATGCTGCTGCTGGCGTTCCTGGTGCTACATCCGGCCCTGGTGACTTTAAACTGGAAATTGATTGGATCAAAGCCTTGAGAACTCAGTGA MGGKETKVAGNGGLEGFQVAGVESLQIAGGGWSSSRWRLMKEEKSWVGGRGRLSSKCIPLDRYLPTWRGNVIDSELEMNPSRIVGLSLSVNAAAGVPGATSGPGDFKLEIDWIKALRTQ
BLAST of Lsi07G003550 vs. Swiss-Prot
Match: CIA30_ARATH (Probable complex I intermediate-associated protein 30 OS=Arabidopsis thaliana GN=At1g17350 PE=1 SV=2) HSP 1 Score: 100.9 bits (250), Expect = 9.9e-21 Identity = 45/60 (75.00%), Postives = 51/60 (85.00%), Query Frame = 1
BLAST of Lsi07G003550 vs. TrEMBL
Match: A0A0A0KYV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011000 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.0e-24 Identity = 57/83 (68.67%), Postives = 67/83 (80.72%), Query Frame = 1
BLAST of Lsi07G003550 vs. TrEMBL
Match: A5BUU9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015801 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 6.6e-24 Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 1
BLAST of Lsi07G003550 vs. TrEMBL
Match: D7TZM4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g00680 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 6.6e-24 Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 1
BLAST of Lsi07G003550 vs. TrEMBL
Match: A0A0D2S102_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G144400 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.1e-23 Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 1
BLAST of Lsi07G003550 vs. TrEMBL
Match: A0A0D2ULY4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G144400 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.1e-23 Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 1
BLAST of Lsi07G003550 vs. TAIR10
Match: AT1G72420.1 (AT1G72420.1 NADH:ubiquinone oxidoreductase intermediate-associated protein 30) HSP 1 Score: 95.5 bits (236), Expect = 2.3e-20 Identity = 46/81 (56.79%), Postives = 58/81 (71.60%), Query Frame = 1
BLAST of Lsi07G003550 vs. TAIR10
Match: AT1G17350.2 (AT1G17350.2 NADH:ubiquinone oxidoreductase intermediate-associated protein 30) HSP 1 Score: 80.9 bits (198), Expect = 5.9e-16 Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 1
BLAST of Lsi07G003550 vs. NCBI nr
Match: gi|659108234|ref|XP_008454089.1| (PREDICTED: probable complex I intermediate-associated protein 30 isoform X2 [Cucumis melo]) HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24 Identity = 59/83 (71.08%), Postives = 67/83 (80.72%), Query Frame = 1
BLAST of Lsi07G003550 vs. NCBI nr
Match: gi|659108232|ref|XP_008454088.1| (PREDICTED: probable complex I intermediate-associated protein 30 isoform X1 [Cucumis melo]) HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24 Identity = 59/83 (71.08%), Postives = 67/83 (80.72%), Query Frame = 1
BLAST of Lsi07G003550 vs. NCBI nr
Match: gi|449468868|ref|XP_004152143.1| (PREDICTED: probable complex I intermediate-associated protein 30 [Cucumis sativus]) HSP 1 Score: 120.9 bits (302), Expect = 1.5e-24 Identity = 57/83 (68.67%), Postives = 67/83 (80.72%), Query Frame = 1
BLAST of Lsi07G003550 vs. NCBI nr
Match: gi|147782669|emb|CAN61795.1| (hypothetical protein VITISV_015801 [Vitis vinifera]) HSP 1 Score: 118.2 bits (295), Expect = 9.5e-24 Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 1
BLAST of Lsi07G003550 vs. NCBI nr
Match: gi|731401701|ref|XP_010654387.1| (PREDICTED: probable complex I intermediate-associated protein 30 [Vitis vinifera]) HSP 1 Score: 118.2 bits (295), Expect = 9.5e-24 Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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