Lsi08G011060 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi08G011060
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr08 : 19711020 .. 19712287 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCACGAACCCGCCTTTTCTTTGTTGATGTGTACCGTTTTAACTCCGAAATTGGAGTCTAGTTGTATGAGTAAGCAGTTGAACAGCTCTTTTTCGATTACTTAATATCTATAATCTCATAGATTCGACTATTAAAGGAATTGCTACCAATGATTCTGAATCGAAGCCTGTTCCTTTCTGGACTTCATAATCTAGCACAGCTGAAAGTTTCATCCAAGCTGGCTGCTAACATTACACAGAGAGAAGACTTGAACAGTGAATAGTAACAAGAGATGAAAATTTGAAATAATTTATTTAGACTTCGTGACTATTGTACAACACAACGAGCAAAAAACTTGGTACAGCTCCGGCCTTGCAGTCATAGACTCGTAAACATGTAAAACAAAGTATAACTTCAACTTCTAAACTTCTTGGATACATTTAGCAGCATATGTTTGACGATCGTGGCTAACAAAGGAGGTGAAACTATAAGAGCTTCAAAAAAATATCAGACCTTTCAGTTCCAGGTTTCTAGAGAGTTTGGCAAGCCAAAGATGTGCTGTCCACCTGCAGAAAATTGAAATATATTTATATGGACGGTTTATTATCATTAGAAGCTTGTAAAATAATATCAACAACGGGGTACCCACAGGAAGATAATGGAGGTCGAAAGGATATTTGAAATTAAAACATAATAGCAATCACATGGCAACACTACGTTTTCAAGTACTTCCACAAAAATATTCATAAAATCAAGCATCCCATTCTACTTTTTCTCATTTACTTGTCGTGAAAACTATCACAATCAACACTATCCATATATTGTATCACAACAGAATGAGAAAAACAAATGTACAACTCAGTGAAAGGCATCCTTTACAAAGAAATGTAAGGTACTTTTATTTGCTCTCTATTAGTTACCATCAACGCTAAGGACAAGGTGCAAAAGAAACCATCTTCCGAATTCCTATACGAAAAATTGTAGAGACTGGATTCTCTTAGGCCTTTGCGGTCATGGATTAAGGGGCAAAACACAGGTTCTGTAGATCACTAATTTTTGTGTTAGCTATTCCTTGAGCCTTTCTTTGGCTTTTTTCATTTTTTCTTGAGTACTCTCTCTTTGGAGTTGTGCATTGGCAATAAAAATAAATAATAGAAGTAACAAGTTTTTTTCATAGGTCTATGTTTCAGCACTGTATCATTATTGGATTATTTGCACAACGGGAAGGAAAAAATTGACAAAAACCGAACAAGTATACTATATCTACCTTATCTATAGACTATAG

mRNA sequence

ATGTTTCACGAACCCGCCTTTTCTTTGTTGATGTGTACCGTTTTAACTCCGAAATTGGAGTCTAGTTGTATGAACTTCGTGACTATTGTACAACACAACGAGCAAAAAACTTGGTACAGCTCCGGCCTTGCAGTCATAGACTCACCTTTCAGTTCCAGGTTTCTAGAGAGTTTGGCAAGCCAAAGATGTGCTGTCCACCTGCAGAAAATTGAAATATATTTATATGGACGGTTTATTATCATTAGAAGCTTCAATCACATGGCAACACTACGTTTTCAATTACCATCAACGCTAAGGACAAGGTGCAAAAGAAACCATCTTCCGAATTCCTATACGAAAAATTGTAGAGACTGGATTCTCTTAGGCCTTTGCGGTCATGGATTAAGGGGCAAAACACAGGTCTATGTTTCAGCACTGTATCATTATTGGATTATTTGCACAACGGGAAGGAAAAAATTGACAAAAACCGAACAAGTATACTATATCTACCTTATCTATAGACTATAG

Coding sequence (CDS)

ATGTTTCACGAACCCGCCTTTTCTTTGTTGATGTGTACCGTTTTAACTCCGAAATTGGAGTCTAGTTGTATGAACTTCGTGACTATTGTACAACACAACGAGCAAAAAACTTGGTACAGCTCCGGCCTTGCAGTCATAGACTCACCTTTCAGTTCCAGGTTTCTAGAGAGTTTGGCAAGCCAAAGATGTGCTGTCCACCTGCAGAAAATTGAAATATATTTATATGGACGGTTTATTATCATTAGAAGCTTCAATCACATGGCAACACTACGTTTTCAATTACCATCAACGCTAAGGACAAGGTGCAAAAGAAACCATCTTCCGAATTCCTATACGAAAAATTGTAGAGACTGGATTCTCTTAGGCCTTTGCGGTCATGGATTAAGGGGCAAAACACAGGTCTATGTTTCAGCACTGTATCATTATTGGATTATTTGCACAACGGGAAGGAAAAAATTGACAAAAACCGAACAAGTATACTATATCTACCTTATCTATAGACTATAG

Protein sequence

MFHEPAFSLLMCTVLTPKLESSCMNFVTIVQHNEQKTWYSSGLAVIDSPFSSRFLESLASQRCAVHLQKIEIYLYGRFIIIRSFNHMATLRFQLPSTLRTRCKRNHLPNSYTKNCRDWILLGLCGHGLRGKTQVYVSALYHYWIICTTGRKKLTKTEQVYYIYLIYRL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G011060.1Lsi08G011060.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi08G011060Cla97C08G155650Watermelon (97103) v2lsiwmbB444
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi08G011060Wax gourdlsiwgoB603
Lsi08G011060Wax gourdlsiwgoB628
Lsi08G011060Bottle gourd (USVL1VR-Ls)lsilsiB153
Lsi08G011060Cucumber (Gy14) v1cgylsiB267
Lsi08G011060Cucumber (Gy14) v1cgylsiB513
Lsi08G011060Cucurbita maxima (Rimu)cmalsiB040
Lsi08G011060Cucurbita maxima (Rimu)cmalsiB184
Lsi08G011060Cucurbita maxima (Rimu)cmalsiB457
Lsi08G011060Cucurbita maxima (Rimu)cmalsiB737
Lsi08G011060Cucurbita moschata (Rifu)cmolsiB028
Lsi08G011060Cucurbita moschata (Rifu)cmolsiB175
Lsi08G011060Cucurbita moschata (Rifu)cmolsiB181
Lsi08G011060Cucurbita moschata (Rifu)cmolsiB443
Lsi08G011060Cucurbita moschata (Rifu)cmolsiB728
Lsi08G011060Cucurbita pepo (Zucchini)cpelsiB098
Lsi08G011060Cucurbita pepo (Zucchini)cpelsiB478
Lsi08G011060Cucurbita pepo (Zucchini)cpelsiB652
Lsi08G011060Cucurbita pepo (Zucchini)cpelsiB685
Lsi08G011060Wild cucumber (PI 183967)cpilsiB139
Lsi08G011060Wild cucumber (PI 183967)cpilsiB240
Lsi08G011060Cucumber (Chinese Long) v2culsiB140
Lsi08G011060Cucumber (Chinese Long) v2culsiB241
Lsi08G011060Melon (DHL92) v3.5.1lsimeB479
Lsi08G011060Melon (DHL92) v3.5.1lsimeB474
Lsi08G011060Watermelon (Charleston Gray)lsiwcgB438
Lsi08G011060Watermelon (97103) v1lsiwmB465
Lsi08G011060Cucumber (Gy14) v2cgyblsiB126
Lsi08G011060Cucumber (Gy14) v2cgyblsiB227
Lsi08G011060Melon (DHL92) v3.6.1lsimedB493
Lsi08G011060Melon (DHL92) v3.6.1lsimedB500
Lsi08G011060Silver-seed gourdcarlsiB056
Lsi08G011060Silver-seed gourdcarlsiB502
Lsi08G011060Silver-seed gourdcarlsiB581
Lsi08G011060Silver-seed gourdcarlsiB898
Lsi08G011060Cucumber (Chinese Long) v3cuclsiB152
Lsi08G011060Cucumber (Chinese Long) v3cuclsiB261