Lsi08G011640 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTACATATACGAATTCCTTTCAGCGATTTGTTGATTAAGTCTTATAATACATTATTACATATATGAATTCCTTTAAACAATCTTGTATTAAGCCTTATAATATATTATTACATATCTGAATTTCTTGCAACGACCCTTTATTAAGTCTCTACAATATATTATTACTTATTTGATTTAGTTGTTCTTCCACTACAAAAGTACAATACATCAATTATCCAACGACTATTTGTAAATAGTACAATCCAATCCATTATTACTTATTATCTTTCACAAAGCACTTTTTTTTTTTGTCTTTGATCAAAAATAAAAAGCACTTTCTTCCTCATGTTAGCAACCAAAACGACGAAGAAAGTCATGGTGGAGAAGAAGGAAAAGCCCAAAGCCGTGATTGTAGGAGGGAGCATTGCCGGAATATCTTGTGCTCACACTCTGCTTAAAGCAGGTTGGGAAGTTCAAGTCCTTGAAAAATCCCCCACGCCGCCGGTCGGTTGTTCCACCGGTGCCGGACTCGCCCTCGATCCTCTCTCTCAGAGGCTCCTCCAGTCATGGCTTTCCCGCCCTGAACTTCTCCTCGAATCCACTTTGCCTCTTGCGACGGAGGAGGTTGAAATCTCTCCCTATTATTTCCTTCATCGTTGTATTATTATGTCGATATATGATACTAATCGTTCTTTGTTTGTGAATTTCGAATCAAATGTTTTCTTTTAATGTTAGGACAAAGTTTATATATATATATATATATATATATATATATTTTATCGAAATTGGATTTAGGAATTAATCTTGAAATTTTTATGTGGATAACCCATTCTTAACCCCCTAAATGATTAATCACCATCTTCCCAAAAAAAGATGAAATCTAACCTTTTGCTTACGTCTAAGCGCATGTACTATCGCGTTAGGGATGATCATGTTTATCGTAGCCTTAATATGTCAGTACCTTGTATTTTAACTCCACTGCAATATTGGGGTTACAATAGATATGACTATCGCTAACGTGATACTGTGTAAAACGCAGTAGTACGCTTTGACGTATGCAAAAGATTAATTTTCATTTGTTATTGGGAGCAGACCATTAATCATTTATGAGGCTGAGAATGAGTCCTTTGTATAAAAATCTCATTAATTTTCACTTCAGAGTTTCAATATCATTGATTTTGATGCAATTGTATTTAATTTCAAATAGAATCGAGCAATCGATGGAGAAAGAAAAAGGGGACGAATTTTGACGAATGATGAGAATTTCGATTTTAGAGCAGCATATTGGGCTGACCTCCATAGCCTTCTATACAAAGAGCTTCCACCTCACATATTTCTTTGGGGTCATCTTTTCCTTTCTCTTTGCATTTCTGATGACAAAACATCTGTGAAAATCAAAGCAAAAGTTGTGAAAACTGGTGAAACCGTTGAAATAGTTGGAGATTTGCTTGTTGCAGCTGATGGTTGTCTCTCTTCCATACGTCAAACATTTCTTCCTAACTTTAAATTGAGGTTGACAAATTATTCCTCTCCCCATTAATATCGTACCGCCATTAATATCTATATCTGTATCTATATCTATATTAAAAGGGGTTAAGATGAAAGCATTTTTAATTTCTCTCTTTATCCTTAACTTTTTCAATACAGACGATTTTATCGTCACACATTCACACCCTTCCATCGTCTTGTACGTATCATTCATCCCTTTTCTTTTTCTTTTTCTTTTTCTTTTAATTTTTCATCCCCTTTTCCCATTAGATTTTTCAACCAATCATATTTTGTCTTTATCCTTTCACACTTTTCACATCTCTATTTTTTTTTTGGGTACTTTTCATGTTTTTTTTCATTTAATTTTATAATTTCTTTTTGCCATTAGATTTTTCAACCATGTTTATTTCGTTCTCACATCCTTTGTTTTTTTGTCCCTTTTATTAAATATTTATTAATAAAGATTTGTAAAGGGAAATTTTCACATATAAAGAACATATCAAACTATTTACAGAAAATAGCAAAAAAAAACAGCATCTATGAGTGATAGACTTTTATCATTTATATCACTTATAGACCCTAGTAGACTTCTATCAGCTTCTATAACAAATATCTAAATTTTTTGCTATTTGGTGTAAATAGTTTTCCTTATTTTTCTATTTTTAAAAGTTTCTCATAGACATCGTTTAACAAATACAAATTCTTTTACACAATAACTACACATTTCTCTTTCTGGCACATTTTCACATGATAAATACATATATTTCTTATAACCTTTGTAAAAATCATATTCATTCAATCTTTAATATTACACTCTATGAAATTATGCTTCAAACATTTTTAACTGCATCCAACACATTTCATACTCATTATAAATTAACTAAATTTAAGCATATATACATTTTTAGTCGCCATCGCACGTGTTCTCTTACTAGTAAATCTAAAATGAAGTTGAATTTGATTATAGATATTCAGGATATTATTGTTGGAGAGGGGTTTTTGATTTCTCAGAGAGAGAGAATTCAGAGACAGTGATGAACATTCGTAAAGCATATCCTGAAATTGGTAAATGCTTGTACATGGACTTGGCTTCTGCTACTCATATTTTATTCTTTGAGGTTCCGAAGAAGAAAATCAATTGGGTTTGGTTTGTTAATGAACAAGAACCCCAACTCAAGGTCATTCCCAACTCTTTCGTTTGTTTTTTGGTGTTCGTATTTGAAAACCATGGAGCAAAAACAACTCTATTAGCTCTATTAATTAGAGCATTCTATCTAATTGTTCAATCATAGTTTATTACGTTCGAAATGTTTCGTACTATTTTAAAAAATATTTTAGAACTTTTTTTTAAAATGTGATTAGGGTGGAATGCTAGGGCATCTTAAGATGCGCATAAGTATTCATGTTTAGTTTTGTTGGATAAAAAATACACGTTTATGTTTAACTTTCAACTTTGACTTTAAAATGTATTTATCATCCATTTAGAAAGTTATTAGTTTGTTTATTGGTGTTTGAAACCAATGAGCGTACAAATGCAGGCTAGATCAATGACCATGAAAGTAAACGAGGAGATGGTGAGAAAATTGCACCAACAAGTGGATGACATTTGGACCCCTGAGGTTGCAAAAGTCGTTAGAGAAACAAAAGATCCTTTCATCAACGTCATCTATGATTGTGATCCATTAGAACAATTAGTTTGGGACAATGTGGTATTAGTTGGAGAAGCAGCTCATCCAACGACGCCTCATTGTGCAAGAAGTACAAATATGGCGTTTTTAGATGCATCTGTTTTAGGTGAATGCCTCCTAAAGTGGGGACCACTTGATCTAAAATCAGCCCTTGCTGAGTATCAGTCTCTTCGACTGCCAGTCATTTATGCACAAGTCTTGCATTCTCGACACGTTGGTCGAATAAAGCAAGGTTTGACACTTCCAGACCGCAAATCCTTCGACCCGAATGTAGCTACTACTACACAAAACTTGCAAGATCTTCAACTTAGAAATACACCTTTTCTTAATGATGTTGAGGATGAAGTTCCTCAAGTGATTGATCTAATTTAATTAACAATCTATGTAATTTACAAATTACAATGTCTGGAAAACCAAAGCTAAAAACTCTGCTCTCTAATTAAATAATAGTTGAGTTTGTTGTATTTTTGTTATTAGCCTCTTTTAATTTATTTTAGTTGAAGAACACATTTATAATTTATGTTATAAATACCCTTGTAATTTTCATTATTTTCTCAATGAGAAGAACTCTTTCACATACTGTGTGAATGAATTATT ATTACATATACGAATTCCTTTCAGCGATTTGTTGATTAAGTCTTATAATACATTATTACATATATGAATTCCTTTAAACAATCTTGTATTAAGCCTTATAATATATTATTACATATCTGAATTTCTTGCAACGACCCTTTATTAAGTCTCTACAATATATTATTACTTATTTGATTTAGTTGTTCTTCCACTACAAAAGTACAATACATCAATTATCCAACGACTATTTGTAAATAGTACAATCCAATCCATTATTACTTATTATCTTTCACAAAGCACTTTTTTTTTTTGTCTTTGATCAAAAATAAAAAGCACTTTCTTCCTCATGTTAGCAACCAAAACGACGAAGAAAGTCATGGTGGAGAAGAAGGAAAAGCCCAAAGCCGTGATTGTAGGAGGGAGCATTGCCGGAATATCTTGTGCTCACACTCTGCTTAAAGCAGGTTGGGAAGTTCAAGTCCTTGAAAAATCCCCCACGCCGCCGGTCGGTTGTTCCACCGGTGCCGGACTCGCCCTCGATCCTCTCTCTCAGAGGCTCCTCCAGTCATGGCTTTCCCGCCCTGAACTTCTCCTCGAATCCACTTTGCCTCTTGCGACGGAGGAGAATCGAGCAATCGATGGAGAAAGAAAAAGGGGACGAATTTTGACGAATGATGAGAATTTCGATTTTAGAGCAGCATATTGGGCTGACCTCCATAGCCTTCTATACAAAGAGCTTCCACCTCACATATTTCTTTGGGGTCATCTTTTCCTTTCTCTTTGCATTTCTGATGACAAAACATCTGTGAAAATCAAAGCAAAAGTTGTGAAAACTGGTGAAACCGTTGAAATAGTTGGAGATTTGCTTGTTGCAGCTGATGGATATTATTGTTGGAGAGGGGTTTTTGATTTCTCAGAGAGAGAGAATTCAGAGACAGTGATGAACATTCGTAAAGCATATCCTGAAATTGGTAAATGCTTGTACATGGACTTGGCTTCTGCTACTCATATTTTATTCTTTGAGGTTCCGAAGAAGAAAATCAATTGGGTTTGGTTTGTTAATGAACAAGAACCCCAACTCAAGGCTAGATCAATGACCATGAAAGTAAACGAGGAGATGGTGAGAAAATTGCACCAACAAGTGGATGACATTTGGACCCCTGAGGTTGCAAAAGTCGTTAGAGAAACAAAAGATCCTTTCATCAACGTCATCTATGATTGTGATCCATTAGAACAATTAGTTTGGGACAATGTGGTATTAGTTGGAGAAGCAGCTCATCCAACGACGCCTCATTGTGCAAGAAGTACAAATATGGCGTTTTTAGATGCATCTGTTTTAGGTGAATGCCTCCTAAAGTGGGGACCACTTGATCTAAAATCAGCCCTTGCTGAGTATCAGTCTCTTCGACTGCCAGTCATTTATGCACAAGTCTTGCATTCTCGACACGTTGGTCGAATAAAGCAAGGTTTGACACTTCCAGACCGCAAATCCTTCGACCCGAATGTAGCTACTACTACACAAAACTTGCAAGATCTTCAACTTAGAAATACACCTTTTCTTAATGATGTTGAGGATGAAGTTCCTCAAGTGATTGATCTAATTTAATTAACAATCTATGTAATTTACAAATTACAATGTCTGGAAAACCAAAGCTAAAAACTCTGCTCTCTAATTAAATAATAGTTGAGTTTGTTGTATTTTTGTTATTAGCCTCTTTTAATTTATTTTAGTTGAAGAACACATTTATAATTTATGTTATAAATACCCTTGTAATTTTCATTATTTTCTCAATGAGAAGAACTCTTTCACATACTGTGTGAATGAATTATT ATGTTAGCAACCAAAACGACGAAGAAAGTCATGGTGGAGAAGAAGGAAAAGCCCAAAGCCGTGATTGTAGGAGGGAGCATTGCCGGAATATCTTGTGCTCACACTCTGCTTAAAGCAGGTTGGGAAGTTCAAGTCCTTGAAAAATCCCCCACGCCGCCGGTCGGTTGTTCCACCGGTGCCGGACTCGCCCTCGATCCTCTCTCTCAGAGGCTCCTCCAGTCATGGCTTTCCCGCCCTGAACTTCTCCTCGAATCCACTTTGCCTCTTGCGACGGAGGAGAATCGAGCAATCGATGGAGAAAGAAAAAGGGGACGAATTTTGACGAATGATGAGAATTTCGATTTTAGAGCAGCATATTGGGCTGACCTCCATAGCCTTCTATACAAAGAGCTTCCACCTCACATATTTCTTTGGGGTCATCTTTTCCTTTCTCTTTGCATTTCTGATGACAAAACATCTGTGAAAATCAAAGCAAAAGTTGTGAAAACTGGTGAAACCGTTGAAATAGTTGGAGATTTGCTTGTTGCAGCTGATGGATATTATTGTTGGAGAGGGGTTTTTGATTTCTCAGAGAGAGAGAATTCAGAGACAGTGATGAACATTCGTAAAGCATATCCTGAAATTGGTAAATGCTTGTACATGGACTTGGCTTCTGCTACTCATATTTTATTCTTTGAGGTTCCGAAGAAGAAAATCAATTGGGTTTGGTTTGTTAATGAACAAGAACCCCAACTCAAGGCTAGATCAATGACCATGAAAGTAAACGAGGAGATGGTGAGAAAATTGCACCAACAAGTGGATGACATTTGGACCCCTGAGGTTGCAAAAGTCGTTAGAGAAACAAAAGATCCTTTCATCAACGTCATCTATGATTGTGATCCATTAGAACAATTAGTTTGGGACAATGTGGTATTAGTTGGAGAAGCAGCTCATCCAACGACGCCTCATTGTGCAAGAAGTACAAATATGGCGTTTTTAGATGCATCTGTTTTAGGTGAATGCCTCCTAAAGTGGGGACCACTTGATCTAAAATCAGCCCTTGCTGAGTATCAGTCTCTTCGACTGCCAGTCATTTATGCACAAGTCTTGCATTCTCGACACGTTGGTCGAATAAAGCAAGGTTTGACACTTCCAGACCGCAAATCCTTCGACCCGAATGTAGCTACTACTACACAAAACTTGCAAGATCTTCAACTTAGAAATACACCTTTTCTTAATGATGTTGAGGATGAAGTTCCTCAAGTGATTGATCTAATTTAA MLATKTTKKVMVEKKEKPKAVIVGGSIAGISCAHTLLKAGWEVQVLEKSPTPPVGCSTGAGLALDPLSQRLLQSWLSRPELLLESTLPLATEENRAIDGERKRGRILTNDENFDFRAAYWADLHSLLYKELPPHIFLWGHLFLSLCISDDKTSVKIKAKVVKTGETVEIVGDLLVAADGYYCWRGVFDFSERENSETVMNIRKAYPEIGKCLYMDLASATHILFFEVPKKKINWVWFVNEQEPQLKARSMTMKVNEEMVRKLHQQVDDIWTPEVAKVVRETKDPFINVIYDCDPLEQLVWDNVVLVGEAAHPTTPHCARSTNMAFLDASVLGECLLKWGPLDLKSALAEYQSLRLPVIYAQVLHSRHVGRIKQGLTLPDRKSFDPNVATTTQNLQDLQLRNTPFLNDVEDEVPQVIDLI
BLAST of Lsi08G011640 vs. Swiss-Prot
Match: DHPH_ARTNI (2,6-dihydroxypyridine 3-monooxygenase OS=Arthrobacter nicotinovorans GN=dhpH PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.7e-12 Identity = 87/371 (23.45%), Postives = 155/371 (41.78%), Query Frame = 1
BLAST of Lsi08G011640 vs. Swiss-Prot
Match: 6HN3M_PSEFL (6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas fluorescens PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.3e-10 Identity = 75/358 (20.95%), Postives = 138/358 (38.55%), Query Frame = 1
BLAST of Lsi08G011640 vs. Swiss-Prot
Match: PAXM_PENPX (FAD-dependent monooxygenase paxM OS=Penicillium paxilli GN=paxM PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.5e-07 Identity = 95/403 (23.57%), Postives = 158/403 (39.21%), Query Frame = 1
BLAST of Lsi08G011640 vs. Swiss-Prot
Match: 3HBH_KLEOX (3-hydroxybenzoate 6-hydroxylase OS=Klebsiella oxytoca GN=mhbM PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.3e-06 Identity = 30/81 (37.04%), Postives = 45/81 (55.56%), Query Frame = 1
BLAST of Lsi08G011640 vs. TrEMBL
Match: A0A0A0LLV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379900 PE=4 SV=1) HSP 1 Score: 654.4 bits (1687), Expect = 9.1e-185 Identity = 315/417 (75.54%), Postives = 355/417 (85.13%), Query Frame = 1
BLAST of Lsi08G011640 vs. TrEMBL
Match: A0A0A0LM75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379880 PE=4 SV=1) HSP 1 Score: 557.8 bits (1436), Expect = 1.2e-155 Identity = 277/424 (65.33%), Postives = 331/424 (78.07%), Query Frame = 1
BLAST of Lsi08G011640 vs. TrEMBL
Match: I1MWN9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G206700 PE=4 SV=1) HSP 1 Score: 516.2 bits (1328), Expect = 3.9e-143 Identity = 247/421 (58.67%), Postives = 317/421 (75.30%), Query Frame = 1
BLAST of Lsi08G011640 vs. TrEMBL
Match: A0A0B2SLQ3_GLYSO (3-hydroxybenzoate 6-hydroxylase OS=Glycine soja GN=glysoja_044130 PE=4 SV=1) HSP 1 Score: 514.6 bits (1324), Expect = 1.1e-142 Identity = 245/418 (58.61%), Postives = 315/418 (75.36%), Query Frame = 1
BLAST of Lsi08G011640 vs. TrEMBL
Match: F6H3T0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04750 PE=4 SV=1) HSP 1 Score: 510.0 bits (1312), Expect = 2.8e-141 Identity = 240/415 (57.83%), Postives = 311/415 (74.94%), Query Frame = 1
BLAST of Lsi08G011640 vs. TAIR10
Match: AT5G11330.1 (AT5G11330.1 FAD/NAD(P)-binding oxidoreductase family protein) HSP 1 Score: 467.2 bits (1201), Expect = 1.0e-131 Identity = 220/380 (57.89%), Postives = 286/380 (75.26%), Query Frame = 1
BLAST of Lsi08G011640 vs. NCBI nr
Match: gi|449442196|ref|XP_004138868.1| (PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 654.4 bits (1687), Expect = 1.3e-184 Identity = 315/417 (75.54%), Postives = 355/417 (85.13%), Query Frame = 1
BLAST of Lsi08G011640 vs. NCBI nr
Match: gi|659088765|ref|XP_008445149.1| (PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Cucumis melo]) HSP 1 Score: 641.7 bits (1654), Expect = 8.7e-181 Identity = 315/415 (75.90%), Postives = 356/415 (85.78%), Query Frame = 1
BLAST of Lsi08G011640 vs. NCBI nr
Match: gi|449442198|ref|XP_004138869.1| (PREDICTED: zeaxanthin epoxidase, chloroplastic [Cucumis sativus]) HSP 1 Score: 557.8 bits (1436), Expect = 1.7e-155 Identity = 277/424 (65.33%), Postives = 331/424 (78.07%), Query Frame = 1
BLAST of Lsi08G011640 vs. NCBI nr
Match: gi|659088762|ref|XP_008445148.1| (PREDICTED: LOW QUALITY PROTEIN: zeaxanthin epoxidase, chloroplastic-like [Cucumis melo]) HSP 1 Score: 557.0 bits (1434), Expect = 2.8e-155 Identity = 272/420 (64.76%), Postives = 329/420 (78.33%), Query Frame = 1
BLAST of Lsi08G011640 vs. NCBI nr
Match: gi|719994778|ref|XP_010254282.1| (PREDICTED: zeaxanthin epoxidase, chloroplastic [Nelumbo nucifera]) HSP 1 Score: 516.9 bits (1330), Expect = 3.2e-143 Identity = 242/418 (57.89%), Postives = 310/418 (74.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |