Lsi08G016520 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi08G016520
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr08 : 24343133 .. 24344559 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTAAGTTGAAGTGGGTCAACAACCTTTTCTAAATGGTTTTATTTTTAAATTTCCAGGTTTGTGGGGATTCAAAGGCTTCCAAAGATCATCATCATCATCAGAACCATTTGAGTCCTCTGGTTCAGAATTACCAACATCCATATGATCTTTATTGGCAAAGTTATGACAAAATGGAGAAACATGCCCGAAGCAACCATTGGCAAGCGGTGATTGAGCAGCATGATCACCCTGAGTCTTGCGAACAGATGATCTTTGCAGAGTTCCTCCAGAACGTCTAGTTGATGGAGACTGACAACCCTTGCGGGTCGAGCTGCCCCTACACCCAGCATTTTGGCTGTGTTCAAATTTATTACCCTCGTTCATAAAATCTTCGAGTGTTTTAACATCAGACAGATCTAAGAGGATAAAGTCTTGAAAAATATTACTAGTGGTGGCCAACTGCATAAATAAAAAAGTTACAATCAATTGTCAAATGATATAAAAGGTAAAAAAGTCAATTAATTATAGCAACTAATTACCAGGTATGAATCTAGTTCCCCATTGTCATCAGATGCGTCCAAGCAATCCCCCTCAAGAACGACTAAATTTGCAGGAGGTTTTACAGTTTGACGTAACCAAACATCTTCCTTGGAAATATCCAAGGTATTCTTTGGGTCAACTGCAATAAGCAGATTCGAATCAGAAGTCAAAACATCATTCTATCTAAGTATTCCACTAGATAATGTACCTGGCACATTCCCAGAAACCCAATATAAGTTGTTTTCGTCCTCAGCAATTTTGTGAGAAGCATTTTGTTCCGCCTCAATTGAGGTCCCTTCCAAATGATCCTTCCTGTTTGAATAAAAAAGTTATGAAAATATTTAAAATAATAATAATAACAACACAGGACAAGCAATAATTCGCCCCAGTTGAATGTTAGTCATTTCTTATTTTGGGAGCCTCATGGACCAGACAACAAAACCGGTGCCAGACTTCTAATGCGTTAACTAACTATAAAAACTAAATTGAATAAAATAATCAAACCTTTTTTCAGATAGGAACTCCAATGCTCGCAAAACTAATGAGTAGAGGTATTCAACCTTTCGACTGTACACTTGAATTGAACCTTGAAGAAGCAGAGCAGCTATACCCTCGAGAAATAAATCCCAAAAAACACGACGCAATCAGAAATATTCAATTTTTTCACAATCCAAAACCCCCAAGACAGTAAAAGTATCCTCACCTTCAGCAAAATTGACAGTGTGGTTGTCATTTTCACCGGACTGAAACTCACCGGAGCAAATCTGCAACAGATATCTCTCGAGGTTCTTGGCGAGGTCGACTTCCCAATTCAACCGAAGGTCGCGCTCCGGCTGCAGCATGTGGAAAGCAGCCTCTCCAGTACCGTCGGTTTTAACAGCCATCTTGAGATTGAAAATTGA

mRNA sequence

ATGAATGTTTGTGGGGATTCAAAGGCTTCCAAAGATCATCATCATCATCAGAACCATTTGAGTCCTCTGGTTCAGAATTACCAACATCCATATGATCTTTATTGGCAAAGTTATGACAAAATGGAGAAACATGCCCGAAGCAACCATTGGCAAGCGGTGATTGAGCAGCATGATCACCCTGAGTCTTGCGAACAGATGATCTTTGCAGAGTTCCTCCAGAACATGCGTCCAAGCAATCCCCCTCAAGAACGACTAAATTTGCAGGAGGTTTTACAGTTTGACGTAACCAAACATCTTCCTTGGAAATATCCAAGGACAAGCAATAATTCGCCCCAGTTGAATATAGGAACTCCAATGCTCGCAAAACTAATGAGTAGAGGTATTCAACCTTTCGACTGTACACTTGAATTGAACCTTGAAGAAGCAGAGCAGCTATACCCTCGAGAAATAAATCCCAAAAAACACGACGCAATCAGAAATATTCAATTTTTTCACAATCCAAAACCCCCAAGACACAAAATTGACAGTGTGGTTGTCATTTTCACCGGACTGAAACTCACCGGAGCAAATCTGCAACAGATATCTCTCGAGGTTCTTGGCGAGGTCGACTTCCCAATTCAACCGAAGGTCGCGCTCCGGCTGCAGCATGTGGAAAGCAGCCTCTCCAGTACCGTCGGTTTTAACAGCCATCTTGAGATTGAAAATTGA

Coding sequence (CDS)

ATGAATGTTTGTGGGGATTCAAAGGCTTCCAAAGATCATCATCATCATCAGAACCATTTGAGTCCTCTGGTTCAGAATTACCAACATCCATATGATCTTTATTGGCAAAGTTATGACAAAATGGAGAAACATGCCCGAAGCAACCATTGGCAAGCGGTGATTGAGCAGCATGATCACCCTGAGTCTTGCGAACAGATGATCTTTGCAGAGTTCCTCCAGAACATGCGTCCAAGCAATCCCCCTCAAGAACGACTAAATTTGCAGGAGGTTTTACAGTTTGACGTAACCAAACATCTTCCTTGGAAATATCCAAGGACAAGCAATAATTCGCCCCAGTTGAATATAGGAACTCCAATGCTCGCAAAACTAATGAGTAGAGGTATTCAACCTTTCGACTGTACACTTGAATTGAACCTTGAAGAAGCAGAGCAGCTATACCCTCGAGAAATAAATCCCAAAAAACACGACGCAATCAGAAATATTCAATTTTTTCACAATCCAAAACCCCCAAGACACAAAATTGACAGTGTGGTTGTCATTTTCACCGGACTGAAACTCACCGGAGCAAATCTGCAACAGATATCTCTCGAGGTTCTTGGCGAGGTCGACTTCCCAATTCAACCGAAGGTCGCGCTCCGGCTGCAGCATGTGGAAAGCAGCCTCTCCAGTACCGTCGGTTTTAACAGCCATCTTGAGATTGAAAATTGA

Protein sequence

MNVCGDSKASKDHHHHQNHLSPLVQNYQHPYDLYWQSYDKMEKHARSNHWQAVIEQHDHPESCEQMIFAEFLQNMRPSNPPQERLNLQEVLQFDVTKHLPWKYPRTSNNSPQLNIGTPMLAKLMSRGIQPFDCTLELNLEEAEQLYPREINPKKHDAIRNIQFFHNPKPPRHKIDSVVVIFTGLKLTGANLQQISLEVLGEVDFPIQPKVALRLQHVESSLSSTVGFNSHLEIEN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G016520.1Lsi08G016520.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi08G016520Cucurbita pepo (Zucchini)cpelsiB045
Lsi08G016520Cucurbita pepo (Zucchini)cpelsiB100
Lsi08G016520Cucurbita pepo (Zucchini)cpelsiB383
Lsi08G016520Cucurbita pepo (Zucchini)cpelsiB691
Lsi08G016520Wild cucumber (PI 183967)cpilsiB083
Lsi08G016520Wild cucumber (PI 183967)cpilsiB141
Lsi08G016520Wild cucumber (PI 183967)cpilsiB392
Lsi08G016520Cucumber (Chinese Long) v2culsiB085
Lsi08G016520Cucumber (Chinese Long) v2culsiB142
Lsi08G016520Cucumber (Chinese Long) v2culsiB388
Lsi08G016520Melon (DHL92) v3.5.1lsimeB462
Lsi08G016520Melon (DHL92) v3.5.1lsimeB465
Lsi08G016520Melon (DHL92) v3.5.1lsimeB469
Lsi08G016520Watermelon (Charleston Gray)lsiwcgB433
Lsi08G016520Watermelon (Charleston Gray)lsiwcgB436
Lsi08G016520Watermelon (Charleston Gray)lsiwcgB438
Lsi08G016520Watermelon (97103) v1lsiwmB462
Lsi08G016520Watermelon (97103) v1lsiwmB483
Lsi08G016520Watermelon (97103) v1lsiwmB498
Lsi08G016520Cucumber (Gy14) v2cgyblsiB129
Lsi08G016520Cucumber (Gy14) v2cgyblsiB355
Lsi08G016520Melon (DHL92) v3.6.1lsimedB481
Lsi08G016520Melon (DHL92) v3.6.1lsimedB484
Lsi08G016520Melon (DHL92) v3.6.1lsimedB489
Lsi08G016520Silver-seed gourdcarlsiB219
Lsi08G016520Silver-seed gourdcarlsiB454
Lsi08G016520Silver-seed gourdcarlsiB568
Lsi08G016520Silver-seed gourdcarlsiB665
Lsi08G016520Cucumber (Chinese Long) v3cuclsiB096
Lsi08G016520Cucumber (Chinese Long) v3cuclsiB155
Lsi08G016520Cucumber (Chinese Long) v3cuclsiB411
Lsi08G016520Watermelon (97103) v2lsiwmbB438
Lsi08G016520Watermelon (97103) v2lsiwmbB444
Lsi08G016520Wax gourdlsiwgoB608
Lsi08G016520Wax gourdlsiwgoB619
Lsi08G016520Bottle gourd (USVL1VR-Ls)lsilsiB149
Lsi08G016520Cucumber (Gy14) v1cgylsiB468
Lsi08G016520Cucumber (Gy14) v1cgylsiB637
Lsi08G016520Cucurbita maxima (Rimu)cmalsiB188
Lsi08G016520Cucurbita maxima (Rimu)cmalsiB394
Lsi08G016520Cucurbita maxima (Rimu)cmalsiB397
Lsi08G016520Cucurbita maxima (Rimu)cmalsiB704
Lsi08G016520Cucurbita maxima (Rimu)cmalsiB739
Lsi08G016520Cucurbita moschata (Rifu)cmolsiB178
Lsi08G016520Cucurbita moschata (Rifu)cmolsiB379
Lsi08G016520Cucurbita moschata (Rifu)cmolsiB698
Lsi08G016520Cucurbita moschata (Rifu)cmolsiB731