Lsi09G012730 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G012730
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionSieve element occlusion protein 1
Locationchr09 : 20525286 .. 20527088 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATACTTCCTCTATTTCATTGCATTGGAGGACTTTTCCCTAACTCTGCTTTTTTACATCTTCTCAGAGCATTGAAGTATTTTTTTCCAAAAAAATAATTAAAAATAATAATTGCAAACCAGAAACTAGTATAATATTTATTCATGTTATATTACAATTTATTAGGAGGGTATGTATATATAAGAAGGTGCAAATGTGTGTATTTTTTTCAGTTAAGTGTTGAAGAAAGTTTGTCAGGAAAGATTGTGACATTGATAATTTCTAGATTGAATATCTCAGATGGTGATAACAGAGCTTTAAATAACTTTTGTGGTTATTTGAGAAGATTAAACAGTAAATATGAGATGGTTTGGATTCCAATAATCCCAGAGACTGATGATGAAGAAGAAGAAGAAGATAACCGCAAGAAATGTGATTATTTGTGTTCTACAATGACATGGTATTCATTATCATTCCATACGCACATATCTGGCATGAGATATTTTGAAGAGAAGTGGCATCTTAGGGAGGATCCATTAGTTGTGGTACTAAACGAAGACTCTAAAGTGGAATTCATGAATGCAATTCATTTAATTCGTGTTTGGGAAACTGATGCAATCCCTTTTACAAAAAAAAAATATTGATGGTTTACTAAAAAAAAAACTGGCCTGAGTCAACTCTCATCAAATTCACTCACCAACCACGACTACGATATTGGGTATGTATAACAAGTGATATCCCATTTTTAATACATGCTTTTGATTTCTTTTTTCATTCCCCTTTTAGGTTATATTATAAGAAAATACTCTCGAACTTTGTCATTTGTTTGAAAAATACTTACATACTCTCAAAAGTTGCAATATTATTATTGGCCTAATTTCATAAAATTTCAAATAAAAATTGAGACCTGAAACAATGTGATCTAGAAAGGAAATTTGAATCATCACTCTATTCTAGGTCACCAATACACAATTTGTCTCGATTTTGTTTGAAATTCTTATGAACTTCTATTCTAAAGTTAGTTTTGAAATGTTTTTTTCTTTTTTAAAATAAGGGTATTCTTGAAACCAAAGACAAGTTTAAATGCTTCTGTTTTAATTGTTTAAATCTGTTTAGATTGACTTCTTAGTGCTTAAAACAAGTATCTTTAAGCTATAATTAGAAAGTCAATTCAAACAAAACCACCTCTCATGTCGTTTATGTTGATGTACATATATACTCTTTCCAAACAGATCGACCATGGGAAAAACATCCTATTCTATGGAGGAAAAGACCCGATGTGGATCCAACAATTTGAAGATCGAATAAAAATTTTGAAAAGTGATCCTTTGATAATGGAAAAGGGTTCATTTGAAATTGTACGTATAGGAAAAGATGCAAAAGGAAAGGATGATCCAGCACTTATGGCTCATTTTTGGACAACACAATGGAGCTATTTTGCAGTCAGGAGCCAATTGAGAGGTTCACGTGCGAGTGAATCAATAAACGACATCTTAAGATTGATTTCATACCAAAATGAAGATGGTTGGGTTGTTCTAACCGTAGGATCAACCCCAGAGCTAGTTGGGCGTGGGATTTTGATATTGAAATTGCTTAAAGAGTTCCCAAAATGGAAGCAAGATTTAAATCGGATGGACTTCCCTCGTGCCTTTAAAGAATACTTCAATAAATTGGCTCCCAAAAGTCACCAATGTGATCAAGTAGTTCTTCCAAAGTTCAGTGGATGGATTCCTATAGTTGTGAATTGTACTGAATGTGCTGATTTCATGAAGGTTAATATTAGCTTCAAGTGCCGCCATTTGAGGAGCTCAAATGTGATGTGA

mRNA sequence

ATGATACTTCCTCTATTTCATTGCATTGGAGGACTTTTCCCTAACTCTGCTTTTTTACATCTTCTCAGAGCATTGAAGAGGATCGACCATGGGAAAAACATCCTATTCTATGGAGGAAAAGACCCGATGTGGATCCAACAATTTGAAGATCGAATAAAAATTTTGAAAAGTGATCCTTTGATAATGGAAAAGGGTTCATTTGAAATTGTACGTATAGGAAAAGATGCAAAAGGAAAGGATGATCCAGCACTTATGGCTCATTTTTGGACAACACAATGGAGCTATTTTGCAGTCAGGAGCCAATTGAGAGGTTCACGTGCGAGTGAATCAATAAACGACATCTTAAGATTGATTTCATACCAAAATGAAGATGGTTGGGTTGTTCTAACCGTAGGATCAACCCCAGAGCTAGTTGGGCGTGGGATTTTGATATTGAAATTGCTTAAAGAGTTCCCAAAATGGAAGCAAGATTTAAATCGGATGGACTTCCCTCGTGCCTTTAAAGAATACTTCAATAAATTGGCTCCCAAAAGTCACCAATGTGATCAAGTAGTTCTTCCAAAGTTCAGTGGATGGATTCCTATAGTTGTGAATTGTACTGAATGTGCTGATTTCATGAAGGTTAATATTAGCTTCAAGTGCCGCCATTTGAGGAGCTCAAATGTGATGTGA

Coding sequence (CDS)

ATGATACTTCCTCTATTTCATTGCATTGGAGGACTTTTCCCTAACTCTGCTTTTTTACATCTTCTCAGAGCATTGAAGAGGATCGACCATGGGAAAAACATCCTATTCTATGGAGGAAAAGACCCGATGTGGATCCAACAATTTGAAGATCGAATAAAAATTTTGAAAAGTGATCCTTTGATAATGGAAAAGGGTTCATTTGAAATTGTACGTATAGGAAAAGATGCAAAAGGAAAGGATGATCCAGCACTTATGGCTCATTTTTGGACAACACAATGGAGCTATTTTGCAGTCAGGAGCCAATTGAGAGGTTCACGTGCGAGTGAATCAATAAACGACATCTTAAGATTGATTTCATACCAAAATGAAGATGGTTGGGTTGTTCTAACCGTAGGATCAACCCCAGAGCTAGTTGGGCGTGGGATTTTGATATTGAAATTGCTTAAAGAGTTCCCAAAATGGAAGCAAGATTTAAATCGGATGGACTTCCCTCGTGCCTTTAAAGAATACTTCAATAAATTGGCTCCCAAAAGTCACCAATGTGATCAAGTAGTTCTTCCAAAGTTCAGTGGATGGATTCCTATAGTTGTGAATTGTACTGAATGTGCTGATTTCATGAAGGTTAATATTAGCTTCAAGTGCCGCCATTTGAGGAGCTCAAATGTGATGTGA

Protein sequence

MILPLFHCIGGLFPNSAFLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRHLRSSNVM
Homology
[Close]
BLAST of Lsi09G012730 vs. Swiss-Prot
Match: SEOA_ARATH (Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana GN=SEOA PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.0e-11
Identity = 54/222 (24.32%), Postives = 97/222 (43.69%), Query Frame = 1 

Query: 24  ALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGK-DAKGKDDP 83
           +L ++  GK I  YGG+D  WI+ F    + +     I      E+V +GK + K    P
Sbjct: 603 SLNQLVDGKYICLYGGEDMQWIKNFTSLWRNVAKAANIQ----LEMVYVGKRNPKNGIQP 662

Query: 84  AL-------MAH----------FWTTQWSYFAVRSQL---RGSRASES---------IND 143
            +       ++H          FWT   S +  + ++    G +  E          + +
Sbjct: 663 IINTIREENLSHTLPDLFQIWFFWTRVESMWESKQRMLKAHGIKGREGFKEEEKDLVLQE 722

Query: 144 ILRLISYQNE-DGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFN 203
           ++ ++ Y  E DGW +++  S   +  +G L  + L EF +W+ ++    F  A  ++  
Sbjct: 723 VVAMLGYGGEGDGWGLVSKASDMMVRAKGNLFSRGLAEFNEWEVNIPTKGFLTALNDHLL 782

Query: 204 KLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKC 215
              P  H C + +LP+ +G IP  V CTEC   M+    ++C
Sbjct: 783 MRLPP-HHCTRFMLPETAGIIPNEVECTECRRTMEKYYLYQC 819

[Close]
BLAST of Lsi09G012730 vs. TrEMBL
Match: A0A0A0LIA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G199900 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.2e-79
Identity = 141/199 (70.85%), Postives = 162/199 (81.41%), Query Frame = 1 

Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   KNILFYGGKDP+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA 
Sbjct: 486 FTHQPRLQNWIARDKNILFYGGKDPLWIQQFEERAEILRSDPLIMDGGSFEIVRIGKDAI 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRLISYQNEDGWVVLTVG+ P L
Sbjct: 546 GQDDPALMARFWTTQWGYFVVKSQIKGSSASETTEDILRLISYQNEDGWVVLTVGTAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL++FPKWKQ+L    FP  F+EYFN+LA  SHQCD+V+LP FSGWIP++V
Sbjct: 606 VGRGILILKLLEDFPKWKQNLRIKAFPDVFREYFNELAFSSHQCDRVILPGFSGWIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  IS KC H
Sbjct: 666 NCPECPRFMETGISLKCCH 684

[Close]
BLAST of Lsi09G012730 vs. TrEMBL
Match: I6V4B3_CUCMA (Sieve element occlusion protein 1 OS=Cucurbita maxima GN=SEO1 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.0e-78
Identity = 141/199 (70.85%), Postives = 162/199 (81.41%), Query Frame = 1 

Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   K+ILFYGGK+PMWIQQFE+R++ILKSDPLI + GSFEIVRIGK+AK
Sbjct: 486 FTHQPRLQSWIKQEKSILFYGGKEPMWIQQFEERVEILKSDPLIRDGGSFEIVRIGKNAK 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FW  QW YF V+SQL GS ASE+  DILRLISYQNEDGWVVL+VGS P L
Sbjct: 546 GEDDPALMARFWKIQWGYFIVKSQLIGSSASETTEDILRLISYQNEDGWVVLSVGSAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL+EFPKWKQ L    FP AF++YFN+LA KSHQCD+V+LP FSG+IP++V
Sbjct: 606 VGRGILILKLLEEFPKWKQSLRLKAFPDAFRDYFNELALKSHQCDRVILPGFSGYIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

[Close]
BLAST of Lsi09G012730 vs. TrEMBL
Match: A0A0A0LIL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G196890 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 6.7e-78
Identity = 140/199 (70.35%), Postives = 158/199 (79.40%), Query Frame = 1 

Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   K+ILFYGGKD  WIQQFE+R  ILKSDPLIM+ GSFEIVRIGKD K
Sbjct: 486 FTHQPRLQNWIRQEKSILFYGGKDSKWIQQFEERADILKSDPLIMDGGSFEIVRIGKDTK 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDP+LMA FWTTQW YF V+SQ+ GS ASE+  DILRLISYQNEDGWVVL VG+ P L
Sbjct: 546 GEDDPSLMARFWTTQWGYFVVKSQIIGSSASETTEDILRLISYQNEDGWVVLAVGTAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL+EFPKWKQ L    FP  F+EYFN+LA +SHQCD+V+LP FSGWIP++V
Sbjct: 606 VGRGILILKLLEEFPKWKQSLRIKAFPDVFREYFNELALQSHQCDRVILPGFSGWIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

[Close]
BLAST of Lsi09G012730 vs. TrEMBL
Match: A0A0A0LKR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G196900 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 8.8e-78
Identity = 136/199 (68.34%), Postives = 163/199 (81.91%), Query Frame = 1 

Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R L   +  K+ILFYGGKDP WIQQFE+R +ILKSDPLI+E  SFEIVRIGK+A+
Sbjct: 485 FTHQPRLLSWFNQEKSILFYGGKDPKWIQQFEERTEILKSDPLIIEGRSFEIVRIGKNAR 544

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G++DPALMA FWTTQW+YF ++SQL+GS ASE+  DILRLISY+NE+GWVVLTVG  P L
Sbjct: 545 GEEDPALMARFWTTQWAYFIIKSQLKGSSASETTEDILRLISYENENGWVVLTVGPAPLL 604

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRG LIL+LL++FPKWKQ L    FP AF+EYFN+LA K+HQCD+V+LP FSGWIP++V
Sbjct: 605 VGRGFLILRLLEDFPKWKQTLRLKGFPDAFREYFNELAAKNHQCDRVILPGFSGWIPMIV 664

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 665 NCPECPRFMETGISFKCCH 683

[Close]
BLAST of Lsi09G012730 vs. TrEMBL
Match: A0A0A0LKQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G193380 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.9e-64
Identity = 120/193 (62.18%), Postives = 149/193 (77.20%), Query Frame = 1 

Query: 28  IDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKG-SFEIVRIGKDAKGKDDPALMA 87
           I+  KNI+FYGGKDP WIQQFE+++  +K+DP I  KG +FEIVRI +D    DDP LM+
Sbjct: 491 INQEKNIIFYGGKDPNWIQQFEEKVIDIKTDPWIRSKGITFEIVRIIRD----DDPKLMS 550

Query: 88  HFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPELVGRGILILK 147
            FW TQW +F V+SQ++GS ASE+  DILRLISY+NE+GW +L VGS P LVGRG LIL 
Sbjct: 551 RFWITQWGFFIVKSQIKGSSASETTEDILRLISYENENGWGILAVGSEPVLVGRGNLILA 610

Query: 148 LLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFM 207
           +L++F KWKQ LN   FP +F++YFN+LA K+HQCD+VVLP FSGWIP+VVNC EC  FM
Sbjct: 611 VLQDFNKWKQILNIKSFPDSFRDYFNELALKTHQCDRVVLPGFSGWIPMVVNCPECPRFM 670

Query: 208 KVNISFKCRHLRS 220
              ISFKC H R+
Sbjct: 671 DTGISFKCCHGRA 679

[Close]
BLAST of Lsi09G012730 vs. TAIR10
Match: AT3G01670.1 (AT3G01670.1 unknown protein)

HSP 1 Score: 69.3 bits (168), Expect = 3.4e-12
Identity = 54/222 (24.32%), Postives = 97/222 (43.69%), Query Frame = 1 

Query: 24  ALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGK-DAKGKDDP 83
           +L ++  GK I  YGG+D  WI+ F    + +     I      E+V +GK + K    P
Sbjct: 603 SLNQLVDGKYICLYGGEDMQWIKNFTSLWRNVAKAANIQ----LEMVYVGKRNPKNGIQP 662

Query: 84  AL-------MAH----------FWTTQWSYFAVRSQL---RGSRASES---------IND 143
            +       ++H          FWT   S +  + ++    G +  E          + +
Sbjct: 663 IINTIREENLSHTLPDLFQIWFFWTRVESMWESKQRMLKAHGIKGREGFKEEEKDLVLQE 722

Query: 144 ILRLISYQNE-DGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFN 203
           ++ ++ Y  E DGW +++  S   +  +G L  + L EF +W+ ++    F  A  ++  
Sbjct: 723 VVAMLGYGGEGDGWGLVSKASDMMVRAKGNLFSRGLAEFNEWEVNIPTKGFLTALNDHLL 782

Query: 204 KLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKC 215
              P  H C + +LP+ +G IP  V CTEC   M+    ++C
Sbjct: 783 MRLPP-HHCTRFMLPETAGIIPNEVECTECRRTMEKYYLYQC 819

[Close]
BLAST of Lsi09G012730 vs. NCBI nr
Match: gi|778668884|ref|XP_004150431.2| (PREDICTED: uncharacterized protein LOC101203597 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 1.8e-79
Identity = 141/199 (70.85%), Postives = 162/199 (81.41%), Query Frame = 1 

Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   KNILFYGGKDP+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA 
Sbjct: 486 FTHQPRLQNWIARDKNILFYGGKDPLWIQQFEERAEILRSDPLIMDGGSFEIVRIGKDAI 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRLISYQNEDGWVVLTVG+ P L
Sbjct: 546 GQDDPALMARFWTTQWGYFVVKSQIKGSSASETTEDILRLISYQNEDGWVVLTVGTAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL++FPKWKQ+L    FP  F+EYFN+LA  SHQCD+V+LP FSGWIP++V
Sbjct: 606 VGRGILILKLLEDFPKWKQNLRIKAFPDVFREYFNELAFSSHQCDRVILPGFSGWIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  IS KC H
Sbjct: 666 NCPECPRFMETGISLKCCH 684

[Close]
BLAST of Lsi09G012730 vs. NCBI nr
Match: gi|659130458|ref|XP_008465183.1| (PREDICTED: uncharacterized protein LOC103502846 [Cucumis melo])

HSP 1 Score: 302.4 bits (773), Expect = 6.7e-79
Identity = 140/199 (70.35%), Postives = 162/199 (81.41%), Query Frame = 1 

Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   K+ILFYGGK+P+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA 
Sbjct: 486 FTHQPRLQNWIARDKSILFYGGKNPLWIQQFEERAEILRSDPLIMDGGSFEIVRIGKDAT 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRLISYQNEDGWVVLTVGS P L
Sbjct: 546 GQDDPALMARFWTTQWGYFVVKSQIKGSSASETTEDILRLISYQNEDGWVVLTVGSAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL+E+PKWKQ L    FP   +EYFN+LA +SHQCD+V+LP FSGWIP++V
Sbjct: 606 VGRGILILKLLEEYPKWKQSLRIKAFPDVVREYFNELALQSHQCDRVILPGFSGWIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

[Close]
BLAST of Lsi09G012730 vs. NCBI nr
Match: gi|393191331|gb|AFN06074.1| (sieve element occlusion protein 1 [Cucurbita maxima])

HSP 1 Score: 299.7 bits (766), Expect = 4.3e-78
Identity = 141/199 (70.85%), Postives = 162/199 (81.41%), Query Frame = 1 

Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   K+ILFYGGK+PMWIQQFE+R++ILKSDPLI + GSFEIVRIGK+AK
Sbjct: 486 FTHQPRLQSWIKQEKSILFYGGKEPMWIQQFEERVEILKSDPLIRDGGSFEIVRIGKNAK 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FW  QW YF V+SQL GS ASE+  DILRLISYQNEDGWVVL+VGS P L
Sbjct: 546 GEDDPALMARFWKIQWGYFIVKSQLIGSSASETTEDILRLISYQNEDGWVVLSVGSAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL+EFPKWKQ L    FP AF++YFN+LA KSHQCD+V+LP FSG+IP++V
Sbjct: 606 VGRGILILKLLEEFPKWKQSLRLKAFPDAFRDYFNELALKSHQCDRVILPGFSGYIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

[Close]
BLAST of Lsi09G012730 vs. NCBI nr
Match: gi|778668879|ref|XP_011649167.1| (PREDICTED: uncharacterized protein LOC101222989 [Cucumis sativus])

HSP 1 Score: 298.5 bits (763), Expect = 9.6e-78
Identity = 140/199 (70.35%), Postives = 158/199 (79.40%), Query Frame = 1 

Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   K+ILFYGGKD  WIQQFE+R  ILKSDPLIM+ GSFEIVRIGKD K
Sbjct: 486 FTHQPRLQNWIRQEKSILFYGGKDSKWIQQFEERADILKSDPLIMDGGSFEIVRIGKDTK 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDP+LMA FWTTQW YF V+SQ+ GS ASE+  DILRLISYQNEDGWVVL VG+ P L
Sbjct: 546 GEDDPSLMARFWTTQWGYFVVKSQIIGSSASETTEDILRLISYQNEDGWVVLAVGTAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL+EFPKWKQ L    FP  F+EYFN+LA +SHQCD+V+LP FSGWIP++V
Sbjct: 606 VGRGILILKLLEEFPKWKQSLRIKAFPDVFREYFNELALQSHQCDRVILPGFSGWIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

[Close]
BLAST of Lsi09G012730 vs. NCBI nr
Match: gi|778668875|ref|XP_004150430.2| (PREDICTED: uncharacterized protein LOC101203350 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 1.3e-77
Identity = 136/199 (68.34%), Postives = 163/199 (81.91%), Query Frame = 1 

Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R L   +  K+ILFYGGKDP WIQQFE+R +ILKSDPLI+E  SFEIVRIGK+A+
Sbjct: 485 FTHQPRLLSWFNQEKSILFYGGKDPKWIQQFEERTEILKSDPLIIEGRSFEIVRIGKNAR 544

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G++DPALMA FWTTQW+YF ++SQL+GS ASE+  DILRLISY+NE+GWVVLTVG  P L
Sbjct: 545 GEEDPALMARFWTTQWAYFIIKSQLKGSSASETTEDILRLISYENENGWVVLTVGPAPLL 604

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRG LIL+LL++FPKWKQ L    FP AF+EYFN+LA K+HQCD+V+LP FSGWIP++V
Sbjct: 605 VGRGFLILRLLEDFPKWKQTLRLKGFPDAFREYFNELAAKNHQCDRVILPGFSGWIPMIV 664

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 665 NCPECPRFMETGISFKCCH 683

The following BLAST results are available for this feature:
BLAST of Lsi09G012730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SEOA_ARATH6.0e-1124.32Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana GN=SEOA PE=1 SV=1[more]
BLAST of Lsi09G012730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIA4_CUCSA1.2e-7970.85Uncharacterized protein OS=Cucumis sativus GN=Csa_2G199900 PE=4 SV=1[more]
I6V4B3_CUCMA3.0e-7870.85Sieve element occlusion protein 1 OS=Cucurbita maxima GN=SEO1 PE=2 SV=1[more]
A0A0A0LIL1_CUCSA6.7e-7870.35Uncharacterized protein OS=Cucumis sativus GN=Csa_2G196890 PE=4 SV=1[more]
A0A0A0LKR0_CUCSA8.8e-7868.34Uncharacterized protein OS=Cucumis sativus GN=Csa_2G196900 PE=4 SV=1[more]
A0A0A0LKQ5_CUCSA1.9e-6462.18Uncharacterized protein OS=Cucumis sativus GN=Csa_2G193380 PE=4 SV=1[more]
BLAST of Lsi09G012730 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G01670.13.4e-1224.32 unknown protein[more]
BLAST of Lsi09G012730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778668884|ref|XP_004150431.2|1.8e-7970.85PREDICTED: uncharacterized protein LOC101203597 [Cucumis sativus][more]
gi|659130458|ref|XP_008465183.1|6.7e-7970.35PREDICTED: uncharacterized protein LOC103502846 [Cucumis melo][more]
gi|393191331|gb|AFN06074.1|4.3e-7870.85sieve element occlusion protein 1 [Cucurbita maxima][more]
gi|778668879|ref|XP_011649167.1|9.6e-7870.35PREDICTED: uncharacterized protein LOC101222989 [Cucumis sativus][more]
gi|778668875|ref|XP_004150430.2|1.3e-7768.34PREDICTED: uncharacterized protein LOC101203350 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027944SEO_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G012730.1Lsi09G012730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027944Sieve element occlusion, C-terminalPFAMPF14577SEO_Ccoord: 25..215
score: 9.5
NoneNo IPR availablePANTHERPTHR33232FAMILY NOT NAMEDcoord: 28..223
score: 8.9
NoneNo IPR availablePANTHERPTHR33232:SF5SUBFAMILY NOT NAMEDcoord: 28..223
score: 8.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi09G012730CsGy2G010710Cucumber (Gy14) v2cgyblsiB080
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G012730Silver-seed gourdcarlsiB204
Lsi09G012730Silver-seed gourdcarlsiB209
Lsi09G012730Silver-seed gourdcarlsiB296
Lsi09G012730Silver-seed gourdcarlsiB687
Lsi09G012730Silver-seed gourdcarlsiB876
Lsi09G012730Cucumber (Chinese Long) v3cuclsiB098
Lsi09G012730Cucumber (Chinese Long) v3cuclsiB163
Lsi09G012730Watermelon (97103) v2lsiwmbB015
Lsi09G012730Watermelon (97103) v2lsiwmbB026
Lsi09G012730Watermelon (97103) v2lsiwmbB029
Lsi09G012730Wax gourdlsiwgoB007
Lsi09G012730Wax gourdlsiwgoB028
Lsi09G012730Bottle gourd (USVL1VR-Ls)lsilsiB011
Lsi09G012730Bottle gourd (USVL1VR-Ls)lsilsiB012
Lsi09G012730Cucumber (Gy14) v1cgylsiB412
Lsi09G012730Cucumber (Gy14) v1cgylsiB628
Lsi09G012730Cucurbita maxima (Rimu)cmalsiB225
Lsi09G012730Cucurbita maxima (Rimu)cmalsiB331
Lsi09G012730Cucurbita maxima (Rimu)cmalsiB464
Lsi09G012730Cucurbita maxima (Rimu)cmalsiB741
Lsi09G012730Cucurbita maxima (Rimu)cmalsiB811
Lsi09G012730Cucurbita moschata (Rifu)cmolsiB142
Lsi09G012730Cucurbita moschata (Rifu)cmolsiB213
Lsi09G012730Cucurbita moschata (Rifu)cmolsiB320
Lsi09G012730Cucurbita moschata (Rifu)cmolsiB733
Lsi09G012730Cucurbita moschata (Rifu)cmolsiB797
Lsi09G012730Cucurbita pepo (Zucchini)cpelsiB101
Lsi09G012730Cucurbita pepo (Zucchini)cpelsiB193
Lsi09G012730Cucurbita pepo (Zucchini)cpelsiB254
Lsi09G012730Cucurbita pepo (Zucchini)cpelsiB484
Lsi09G012730Cucurbita pepo (Zucchini)cpelsiB584
Lsi09G012730Cucurbita pepo (Zucchini)cpelsiB697
Lsi09G012730Wild cucumber (PI 183967)cpilsiB085
Lsi09G012730Wild cucumber (PI 183967)cpilsiB149
Lsi09G012730Cucumber (Chinese Long) v2culsiB150
Lsi09G012730Cucumber (Chinese Long) v2culsiB087
Lsi09G012730Watermelon (Charleston Gray)lsiwcgB011
Lsi09G012730Melon (DHL92) v3.5.1lsimeB025
Lsi09G012730Melon (DHL92) v3.5.1lsimeB029
Lsi09G012730Watermelon (Charleston Gray)lsiwcgB016
Lsi09G012730Watermelon (Charleston Gray)lsiwcgB029
Lsi09G012730Watermelon (Charleston Gray)lsiwcgB032
Lsi09G012730Watermelon (97103) v1lsiwmB013
Lsi09G012730Watermelon (97103) v1lsiwmB017
Lsi09G012730Watermelon (97103) v1lsiwmB040
Lsi09G012730Cucumber (Gy14) v2cgyblsiB136
Lsi09G012730Melon (DHL92) v3.6.1lsimedB027
Lsi09G012730Melon (DHL92) v3.6.1lsimedB032